RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 TNKSO95271 1327 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 RHOXF2BP0C7M4 288 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 UBA7P41226 1012 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 RHOXF2Q9BQY4 288 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 COL15A1P39059 1388 aa12.72□□□□□ -0.37
DDR1-240ENST00000454612 N4BP2Q86UW6 1770 aaPredicted RBP12.72□□□□□ -0.37
DDR1-240ENST00000454612 LMO7Q8WWI1 1683 aa12.71□□□□□ -0.37
DDR1-240ENST00000454612 RAD51AP2Q09MP3 1159 aa12.71□□□□□ -0.37
DDR1-240ENST00000454612 CCDC178Q5BJE1 867 aa12.71□□□□□ -0.37
DDR1-240ENST00000454612 TMX4Q9H1E5 349 aaPredicted RBP12.71□□□□□ -0.37
DDR1-240ENST00000454612 TMCO3Q6UWJ1 677 aa12.71□□□□□ -0.37
DDR1-240ENST00000454612 LRP10Q7Z4F1 713 aa12.71□□□□□ -0.37
DDR1-240ENST00000454612 MAPKAPK5Q8IW41 473 aa12.71□□□□□ -0.37
DDR1-240ENST00000454612 TDRD7Q8NHU6 1098 aaKnown RBP12.71□□□□□ -0.37
DDR1-240ENST00000454612 DPF2Q92785 391 aa12.71□□□□□ -0.37
DDR1-240ENST00000454612 QTRT2Q9H974 415 aaKnown RBP12.71□□□□□ -0.37
DDR1-240ENST00000454612 SAMSN1Q9NSI8 373 aaKnown RBP12.71□□□□□ -0.37
DDR1-240ENST00000454612 MAGEC2Q9UBF1 373 aaPredicted RBP12.71□□□□□ -0.37
DDR1-240ENST00000454612 ELP1O95163 1332 aa12.71□□□□□ -0.37
DDR1-240ENST00000454612 SLU7O95391 586 aaKnown RBP12.71□□□□□ -0.38
DDR1-240ENST00000454612 CYP2D6P10635 497 aa12.71□□□□□ -0.38
DDR1-240ENST00000454612 ANTXR2P58335 489 aa12.71□□□□□ -0.38
DDR1-240ENST00000454612 SOGA3Q5TF21 947 aa12.71□□□□□ -0.38
DDR1-240ENST00000454612 CAPZA3Q96KX2 299 aa12.71□□□□□ -0.38
DDR1-240ENST00000454612 CCDC87Q9NVE4 849 aa12.71□□□□□ -0.38
DDR1-240ENST00000454612 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.38
DDR1-240ENST00000454612 NLRP12P59046 1061 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 PPARAQ07869 468 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 RABL6Q3YEC7 729 aaPredicted RBP12.7□□□□□ -0.38
DDR1-240ENST00000454612 CCDC102AQ96A19 550 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 PSMB7Q99436 277 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 THRAP3Q9Y2W1 955 aaKnown RBP12.7□□□□□ -0.38
DDR1-240ENST00000454612 SPATA31A5Q5VU36 1347 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 SPATA31A7Q8IWB4 1347 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 TSPY3P0CV98 308 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 TSPY8P0CW00 308 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 FANCBQ8NB91 859 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 TRPC5Q9UL62 973 aaPredicted RBP12.7□□□□□ -0.38
DDR1-240ENST00000454612 CTNND2Q9UQB3 1225 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 LOC102724428A0A0B4J2F2 783 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 KRT18P05783 430 aaKnown RBP12.7□□□□□ -0.38
DDR1-240ENST00000454612 SIK1P57059 783 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 ERFEQ4G0M1 354 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 LEKR1Q6ZMV7 388 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 TAB2Q9NYJ8 693 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 PAXBP1Q9Y5B6 917 aa12.7□□□□□ -0.38
DDR1-240ENST00000454612 PLEKHA8P1O95397 391 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 RFC4P35249 363 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 EXOSC10Q01780 885 aaKnown RBP12.69□□□□□ -0.38
DDR1-240ENST00000454612 ARID5AQ03989 594 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 NOSTRINQ8IVI9 506 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 DYNLL2Q96FJ2 89 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 STRBPQ96SI9 672 aaKnown RBP12.69□□□□□ -0.38
DDR1-240ENST00000454612 GUCA1BQ9UMX6 200 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 CEP131Q9UPN4 1083 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 ABCC6O95255 1503 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 MED23Q9ULK4 1368 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 POSTNQ15063 836 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 DIXDC1Q155Q3 683 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 LETM2Q2VYF4 491 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 CSRNP2Q9H175 543 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 SRCAPQ6ZRS2 3230 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 VPS72Q15906 364 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 ZNF569Q5MCW4 686 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 KIAA1328Q86T90 577 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 BAG1Q99933 345 aaPredicted RBP12.69□□□□□ -0.38
DDR1-240ENST00000454612 UBA5Q9GZZ9 404 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 CNNM2Q9H8M5 875 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 PPP1R1BQ9UD71 204 aaPredicted RBP12.69□□□□□ -0.38
DDR1-240ENST00000454612 DACH1Q9UI36 760 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 COL18A1P39060 1754 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 CCDC96Q2M329 555 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 USPL1Q5W0Q7 1092 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 TGFBRAP1Q8WUH2 860 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 TRIM47Q96LD4 638 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 RABEP2Q9H5N1 569 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 OGFRQ9NZT2 677 aa12.69□□□□□ -0.38
DDR1-240ENST00000454612 ABCA3Q99758 1704 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 TFAP4Q01664 338 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 SLC39A14Q15043 492 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 JAKMIP3Q5VZ66 844 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 CRNKL1Q9BZJ0 848 aaKnown RBP12.68□□□□□ -0.38
DDR1-240ENST00000454612 PRR29P0C7W0 189 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 STAT6P42226 847 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 ZNF622Q969S3 477 aaKnown RBP eCLIP12.68□□□□□ -0.38
DDR1-240ENST00000454612 CCDC47Q96A33 483 aaKnown RBP12.68□□□□□ -0.38
DDR1-240ENST00000454612 TMEM87BQ96K49 555 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 FUCA2Q9BTY2 467 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.68□□□□□ -0.38
DDR1-240ENST00000454612 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
DDR1-240ENST00000454612 ZSCAN12O43309 604 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 YEATS4O95619 227 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 CAVIN2O95810 425 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 KRT2P35908 639 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 MB21D2Q8IYB1 491 aaPredicted RBP12.68□□□□□ -0.38
DDR1-240ENST00000454612 FMR1NBQ8N0W7 255 aaPredicted RBP12.68□□□□□ -0.38
DDR1-240ENST00000454612 IGSF22Q8N9C0 903 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 CCDC150Q8NCX0 1101 aa12.68□□□□□ -0.38
DDR1-240ENST00000454612 SH2B2O14492 632 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms