RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 POTEFA5A3E0 1075 aa13.02□□□□□ -0.33
LMCD1-205ENST00000454244 GH2P01242 217 aa13.02□□□□□ -0.33
LMCD1-205ENST00000454244 PLCD1P51178 756 aa13.02□□□□□ -0.33
LMCD1-205ENST00000454244 FCGRTP55899 365 aa13.02□□□□□ -0.33
LMCD1-205ENST00000454244 BACE1P56817 501 aa13.02□□□□□ -0.33
LMCD1-205ENST00000454244 PABPC4Q13310 644 aaKnown RBP eCLIP13.02□□□□□ -0.33
LMCD1-205ENST00000454244 TATDN1Q6P1N9 297 aa13.02□□□□□ -0.33
LMCD1-205ENST00000454244 NBPF11Q86T75 865 aa13.02□□□□□ -0.33
LMCD1-205ENST00000454244 SH3TC2Q8TF17 1288 aa13.02□□□□□ -0.33
LMCD1-205ENST00000454244 SDR42E1Q8WUS8 393 aa13.02□□□□□ -0.33
LMCD1-205ENST00000454244 ZNF333Q96JL9 665 aa13.02□□□□□ -0.33
LMCD1-205ENST00000454244 MCM9Q9NXL9 1143 aa13.02□□□□□ -0.33
LMCD1-205ENST00000454244 TMOD4Q9NZQ9 345 aa13.02□□□□□ -0.33
LMCD1-205ENST00000454244 SIPA1L1O43166 1804 aa13.02□□□□□ -0.33
LMCD1-205ENST00000454244 PRKAB2O43741 272 aa13.01□□□□□ -0.33
LMCD1-205ENST00000454244 MBD4O95243 580 aa13.01□□□□□ -0.33
LMCD1-205ENST00000454244 MYCP01106 439 aaPredicted RBP13.01□□□□□ -0.33
LMCD1-205ENST00000454244 CHGBP05060 677 aa13.01□□□□□ -0.33
LMCD1-205ENST00000454244 ANKRD13CQ8N6S4 541 aa13.01□□□□□ -0.33
LMCD1-205ENST00000454244 CRBNQ96SW2 442 aa13.01□□□□□ -0.33
LMCD1-205ENST00000454244 ASCC2Q9H1I8 757 aaPredicted RBP13.01□□□□□ -0.33
LMCD1-205ENST00000454244 DCP1AQ9NPI6 582 aaPredicted RBP13.01□□□□□ -0.33
LMCD1-205ENST00000454244 MYPNQ86TC9 1320 aa13.01□□□□□ -0.33
LMCD1-205ENST00000454244 C19orf81C9J6K1 198 aa13□□□□□ -0.33
LMCD1-205ENST00000454244 USP17L10C9JJH3 530 aa13□□□□□ -0.33
LMCD1-205ENST00000454244 CYP2D6P10635 497 aa13□□□□□ -0.33
LMCD1-205ENST00000454244 SHMT1P34896 483 aa13□□□□□ -0.33
LMCD1-205ENST00000454244 EVX2Q03828 476 aa13□□□□□ -0.33
LMCD1-205ENST00000454244 PRKCZQ05513 592 aa13□□□□□ -0.33
LMCD1-205ENST00000454244 UBE3CQ15386 1083 aa13□□□□□ -0.33
LMCD1-205ENST00000454244 ABCB5Q2M3G0 1257 aa13□□□□□ -0.33
LMCD1-205ENST00000454244 CERKLQ49MI3 558 aaPredicted RBP13□□□□□ -0.33
LMCD1-205ENST00000454244 TSHZ3Q63HK5 1081 aa13□□□□□ -0.33
LMCD1-205ENST00000454244 RAET1EQ8TD07 263 aa13□□□□□ -0.33
LMCD1-205ENST00000454244 GPATCH3Q96I76 525 aa13□□□□□ -0.33
LMCD1-205ENST00000454244 TMEM106CQ9BVX2 250 aa13□□□□□ -0.33
LMCD1-205ENST00000454244 ZSWIM8A7E2V4 1837 aa12.99□□□□□ -0.33
LMCD1-205ENST00000454244 PHIPQ8WWQ0 1821 aa12.99□□□□□ -0.33
LMCD1-205ENST00000454244 TNPO2O14787 897 aaKnown RBP12.99□□□□□ -0.33
LMCD1-205ENST00000454244 EN2P19622 333 aaPredicted RBP12.99□□□□□ -0.33
LMCD1-205ENST00000454244 GCLCP48506 637 aaPredicted RBP12.99□□□□□ -0.33
LMCD1-205ENST00000454244 IRX3P78415 501 aaPredicted RBP12.99□□□□□ -0.33
LMCD1-205ENST00000454244 GABPAQ06546 454 aa12.99□□□□□ -0.33
LMCD1-205ENST00000454244 RAB3GAP1Q15042 981 aa12.99□□□□□ -0.33
LMCD1-205ENST00000454244 FAM110CQ1W6H9 321 aa12.99□□□□□ -0.33
LMCD1-205ENST00000454244 ZSCAN25Q6NSZ9 544 aa12.99□□□□□ -0.33
LMCD1-205ENST00000454244 USP17L2Q6R6M4 530 aa12.99□□□□□ -0.33
LMCD1-205ENST00000454244 FEZ1Q99689 392 aa12.99□□□□□ -0.33
LMCD1-205ENST00000454244 CABP5Q9NP86 173 aa12.99□□□□□ -0.33
LMCD1-205ENST00000454244 GABRQQ9UN88 632 aa12.99□□□□□ -0.33
LMCD1-205ENST00000454244 CDK5RAP2Q96SN8 1893 aa12.98□□□□□ -0.33
LMCD1-205ENST00000454244 FOCADQ5VW36 1801 aa12.98□□□□□ -0.33
LMCD1-205ENST00000454244 HOXA7P31268 230 aaPredicted RBP12.98□□□□□ -0.33
LMCD1-205ENST00000454244 GRK4P32298 578 aa12.98□□□□□ -0.33
LMCD1-205ENST00000454244 ZYXQ15942 572 aaKnown RBP12.98□□□□□ -0.33
LMCD1-205ENST00000454244 SLC44A5Q8NCS7 719 aa12.98□□□□□ -0.33
LMCD1-205ENST00000454244 P2RX7Q99572 595 aaKnown RBP12.98□□□□□ -0.33
LMCD1-205ENST00000454244 PUS7LQ9H0K6 701 aaKnown RBP12.98□□□□□ -0.33
LMCD1-205ENST00000454244 EMILIN3Q9NT22 766 aa12.98□□□□□ -0.33
LMCD1-205ENST00000454244 ATP8A2Q9NTI2 1148 aa12.98□□□□□ -0.33
LMCD1-205ENST00000454244 GUCY1A2P33402 732 aa12.97□□□□□ -0.33
LMCD1-205ENST00000454244 FLT3LGP49771 235 aa12.97□□□□□ -0.33
LMCD1-205ENST00000454244 KBTBD3Q8NAB2 608 aa12.97□□□□□ -0.33
LMCD1-205ENST00000454244 ACER1Q8TDN7 264 aa12.97□□□□□ -0.33
LMCD1-205ENST00000454244 OTUD7AQ8TE49 926 aaPredicted RBP12.97□□□□□ -0.33
LMCD1-205ENST00000454244 DYNLL2Q96FJ2 89 aa12.97□□□□□ -0.33
LMCD1-205ENST00000454244 BIN2Q9UBW5 565 aaPredicted RBP12.97□□□□□ -0.33
LMCD1-205ENST00000454244 SLC4A4Q9Y6R1 1079 aa12.97□□□□□ -0.33
LMCD1-205ENST00000454244 PTPRFP10586 1907 aa12.97□□□□□ -0.33
LMCD1-205ENST00000454244 CYP2D7A0A087X1C5 515 aa12.96□□□□□ -0.33
LMCD1-205ENST00000454244 USP17L12C9JPN9 530 aa12.96□□□□□ -0.33
LMCD1-205ENST00000454244 USP17L21D6R901 530 aa12.96□□□□□ -0.33
LMCD1-205ENST00000454244 MPHOSPH10O00566 681 aaKnown RBP12.96□□□□□ -0.33
LMCD1-205ENST00000454244 HERVK_113P62684 666 aa12.96□□□□□ -0.33
LMCD1-205ENST00000454244 SEPT2Q15019 361 aa12.96□□□□□ -0.33
LMCD1-205ENST00000454244 MTFR1Q15390 333 aa12.96□□□□□ -0.33
LMCD1-205ENST00000454244 COA7Q96BR5 231 aa12.96□□□□□ -0.33
LMCD1-205ENST00000454244 DDRGK1Q96HY6 314 aa12.96□□□□□ -0.33
LMCD1-205ENST00000454244 C12orf42Q96LP6 360 aa12.96□□□□□ -0.33
LMCD1-205ENST00000454244 KIAA1683Q9H0B3 1180 aa12.96□□□□□ -0.33
LMCD1-205ENST00000454244 MORF4L1Q9UBU8 362 aa12.96□□□□□ -0.33
LMCD1-205ENST00000454244 SWAP70Q9UH65 585 aa12.96□□□□□ -0.33
LMCD1-205ENST00000454244 ATAD5Q96QE3 1844 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 TTC41PQ6P2S7 1318 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 LOC285556D6RIA3 1793 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 SMIM22K7EJ46 135 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 ADCY3O60266 1144 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 PEX10O60683 326 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 USP14P54578 494 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 C12orf60Q5U649 245 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 AMOTL1Q8IY63 956 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 SLAIN1Q8ND83 568 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 APPBP2Q92624 585 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 TXNRD2Q9NNW7 524 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 TAOK2Q9UL54 1235 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 MYH1P12882 1939 aa12.95□□□□□ -0.34
LMCD1-205ENST00000454244 USP17L15C9J2P7 530 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 USP17L13C9JLJ4 530 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 USP17L11C9JVI0 530 aa12.94□□□□□ -0.34
LMCD1-205ENST00000454244 USP17L18D6R9N7 530 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms