RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 CEP170Q5SW79 1584 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 ATP2A2P16615 1042 aaKnown RBP13.43□□□□□ -0.26
SEC16A-207ENST00000453963 TRIML1Q8N9V2 468 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 GOLGA5Q8TBA6 731 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 KLHDC4Q8TBB5 520 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 DENND2AQ9ULE3 1009 aa13.43□□□□□ -0.26
SEC16A-207ENST00000453963 V9GY48 417 aaPredicted RBP13.43□□□□□ -0.26
SEC16A-207ENST00000453963 NEO1Q92859 1461 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 EEF2P13639 858 aaKnown RBP13.42□□□□□ -0.26
SEC16A-207ENST00000453963 ADKP55263 362 aaKnown RBP13.42□□□□□ -0.26
SEC16A-207ENST00000453963 LETM2Q2VYF4 491 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 PIK3AP1Q6ZUJ8 805 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 ZNF496Q96IT1 587 aaPredicted RBP13.42□□□□□ -0.26
SEC16A-207ENST00000453963 SEC62Q99442 399 aaKnown RBP13.42□□□□□ -0.26
SEC16A-207ENST00000453963 MAPK8IP1Q9UQF2 711 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 LTKP29376 864 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 DNAJC10Q8IXB1 793 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 RABGGTAQ92696 567 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 USP44Q9H0E7 712 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 NUCKS1Q9H1E3 243 aaKnown RBP13.42□□□□□ -0.26
SEC16A-207ENST00000453963 PDE8AO60658 829 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 PTH1RQ03431 593 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 SPATS2Q86XZ4 545 aaKnown RBP13.42□□□□□ -0.26
SEC16A-207ENST00000453963 OR8K1Q8NGG5 319 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 XAGE2Q96GT9 111 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 JAG2Q9Y219 1238 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 SSX2IPQ9Y2D8 614 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 EPB41P11171 864 aaKnown RBP13.42□□□□□ -0.26
SEC16A-207ENST00000453963 PNOCQ13519 176 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 ASIC2Q16515 512 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 LMNTD2Q8IXW0 634 aa13.42□□□□□ -0.26
SEC16A-207ENST00000453963 TRMT44Q8IYL2 757 aaKnown RBP13.42□□□□□ -0.26
SEC16A-207ENST00000453963 CETN3O15182 167 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 DTNBO60941 627 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 CLNS1AP54105 237 aaKnown RBP13.41□□□□□ -0.26
SEC16A-207ENST00000453963 PUM3Q15397 648 aaKnown RBP13.41□□□□□ -0.26
SEC16A-207ENST00000453963 NELFBQ8WX92 580 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 A0A1W2PQ27 194 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 A0A1W2PQ64 194 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 A0A1W2PQD8 194 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 STX10O60499 249 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 GCKRQ14397 625 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 DCAF17Q5H9S7 520 aaPredicted RBP13.41□□□□□ -0.26
SEC16A-207ENST00000453963 FAM71BQ8TC56 605 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 SERTAD1Q9UHV2 236 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 CD2BP2O95400 341 aaKnown RBP13.41□□□□□ -0.26
SEC16A-207ENST00000453963 PPM1FP49593 454 aaPredicted RBP13.41□□□□□ -0.26
SEC16A-207ENST00000453963 CLUL1Q15846 466 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 TAOK1Q7L7X3 1001 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 TRIM58Q8NG06 486 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 PHKBQ93100 1093 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 CSRNP2Q9H175 543 aa13.41□□□□□ -0.26
SEC16A-207ENST00000453963 RBM26Q5T8P6 1007 aaKnown RBP13.4□□□□□ -0.26
SEC16A-207ENST00000453963 DAAM2Q86T65 1068 aa13.4□□□□□ -0.26
SEC16A-207ENST00000453963 STMN2Q93045 179 aa13.4□□□□□ -0.26
SEC16A-207ENST00000453963 RBM17Q96I25 401 aaKnown RBP13.4□□□□□ -0.26
SEC16A-207ENST00000453963 HAUS4Q9H6D7 363 aa13.4□□□□□ -0.26
SEC16A-207ENST00000453963 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEC16A-207ENST00000453963 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEC16A-207ENST00000453963 CCDC160A6NGH7 325 aa13.4□□□□□ -0.26
SEC16A-207ENST00000453963 PARP1P09874 1014 aaKnown RBP13.4□□□□□ -0.26
SEC16A-207ENST00000453963 TNFAIP3P21580 790 aa13.4□□□□□ -0.26
SEC16A-207ENST00000453963 LONRF3Q496Y0 759 aa13.4□□□□□ -0.26
SEC16A-207ENST00000453963 DDX17Q92841 729 aaKnown RBP13.4□□□□□ -0.26
SEC16A-207ENST00000453963 CCDC87Q9NVE4 849 aa13.4□□□□□ -0.26
SEC16A-207ENST00000453963 BUB1BO60566 1050 aaPredicted RBP13.4□□□□□ -0.26
SEC16A-207ENST00000453963 HIBADHP31937 336 aaKnown RBP13.4□□□□□ -0.26
SEC16A-207ENST00000453963 GJC1P36383 396 aa13.4□□□□□ -0.26
SEC16A-207ENST00000453963 GOLGA8KD6RF30 607 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 CEP104O60308 925 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 FAM98CQ17RN3 349 aaKnown RBP13.39□□□□□ -0.27
SEC16A-207ENST00000453963 PCDHA7Q9UN72 937 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 MAP2K2P36507 400 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 RPS6KA1Q15418 735 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 CACNA2D3Q8IZS8 1091 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 CHAMP1Q96JM3 812 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 IFIH1Q9BYX4 1025 aaKnown RBP13.39□□□□□ -0.27
SEC16A-207ENST00000453963 FRMD4BQ9Y2L6 1034 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 UFL1O94874 794 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 PCK1P35558 622 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 RNASE9P60153 205 aaKnown RBP13.39□□□□□ -0.27
SEC16A-207ENST00000453963 TEX11Q8IYF3 940 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 UBL4BQ8N7F7 174 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 LSG1Q9H089 658 aaKnown RBP13.39□□□□□ -0.27
SEC16A-207ENST00000453963 RABEP2Q9H5N1 569 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 SPOPO43791 374 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 SYCE1Q8N0S2 351 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 CCDC63Q8NA47 563 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 MSANTD4Q8NCY6 345 aa13.39□□□□□ -0.27
SEC16A-207ENST00000453963 CPSF2Q9P2I0 782 aaKnown RBP13.39□□□□□ -0.27
SEC16A-207ENST00000453963 A0A0D9SFI3 127 aa13.38□□□□□ -0.27
SEC16A-207ENST00000453963 EIF4A1P60842 406 aaKnown RBP13.38□□□□□ -0.27
SEC16A-207ENST00000453963 NCBP1Q09161 790 aaKnown RBP13.38□□□□□ -0.27
SEC16A-207ENST00000453963 DESI2Q9BSY9 194 aa13.38□□□□□ -0.27
SEC16A-207ENST00000453963 ARMT1Q9H993 441 aa13.38□□□□□ -0.27
SEC16A-207ENST00000453963 PLCB1Q9NQ66 1216 aa13.38□□□□□ -0.27
SEC16A-207ENST00000453963 SERPINA10Q9UK55 444 aa13.38□□□□□ -0.27
SEC16A-207ENST00000453963 CLEC11AQ9Y240 323 aa13.38□□□□□ -0.27
SEC16A-207ENST00000453963 PNMA8AQ86V59 439 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms