RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 CCND3P30281 292 aaPredicted RBP26.84■■□□□ 1.89
HMG20B-206ENST00000453933 CCL14Q16627 93 aa26.84■■□□□ 1.89
HMG20B-206ENST00000453933 LRRC26Q2I0M4 334 aa26.84■■□□□ 1.89
HMG20B-206ENST00000453933 SHROOM1Q2M3G4 852 aaPredicted RBP26.84■■□□□ 1.89
HMG20B-206ENST00000453933 GORABQ5T7V8 394 aa26.84■■□□□ 1.89
HMG20B-206ENST00000453933 ASNSP08243 561 aa26.83■■□□□ 1.89
HMG20B-206ENST00000453933 MAPK4P31152 587 aa26.83■■□□□ 1.89
HMG20B-206ENST00000453933 MDM2Q00987 491 aaPredicted RBP26.83■■□□□ 1.89
HMG20B-206ENST00000453933 POTEEQ6S8J3 1075 aa26.83■■□□□ 1.89
HMG20B-206ENST00000453933 TRMT44Q8IYL2 757 aaKnown RBP26.83■■□□□ 1.89
HMG20B-206ENST00000453933 PORCNQ9H237 461 aa26.83■■□□□ 1.89
HMG20B-206ENST00000453933 DHX36Q9H2U1 1008 aaKnown RBP26.83■■□□□ 1.89
HMG20B-206ENST00000453933 DNAJC18Q9H819 358 aa26.83■■□□□ 1.89
HMG20B-206ENST00000453933 C19orf81C9J6K1 198 aa26.82■■□□□ 1.88
HMG20B-206ENST00000453933 ARID4AP29374 1257 aaPredicted RBP26.82■■□□□ 1.88
HMG20B-206ENST00000453933 PDE3AQ14432 1141 aa26.82■■□□□ 1.88
HMG20B-206ENST00000453933 MORN1Q5T089 497 aa26.82■■□□□ 1.88
HMG20B-206ENST00000453933 LRP2BPQ9P2M1 347 aa26.82■■□□□ 1.88
HMG20B-206ENST00000453933 MCAMP43121 646 aa26.81■■□□□ 1.88
HMG20B-206ENST00000453933 ERVK-9P63128 1117 aa26.81■■□□□ 1.88
HMG20B-206ENST00000453933 ERVK-24P63145 666 aa26.81■■□□□ 1.88
HMG20B-206ENST00000453933 MTX1Q13505 466 aa26.81■■□□□ 1.88
HMG20B-206ENST00000453933 GPR142Q7Z601 462 aa26.81■■□□□ 1.88
HMG20B-206ENST00000453933 AATFQ9NY61 560 aaKnown RBP eCLIP26.81■■□□□ 1.88
HMG20B-206ENST00000453933 USP17L10C9JJH3 530 aa26.8■■□□□ 1.88
HMG20B-206ENST00000453933 RGS2P41220 211 aa26.8■■□□□ 1.88
HMG20B-206ENST00000453933 FOXP4Q8IVH2 680 aaPredicted RBP26.8■■□□□ 1.88
HMG20B-206ENST00000453933 TGFBRAP1Q8WUH2 860 aa26.8■■□□□ 1.88
HMG20B-206ENST00000453933 COL25A1Q9BXS0 654 aaPredicted RBP26.8■■□□□ 1.88
HMG20B-206ENST00000453933 ATAD5Q96QE3 1844 aa26.8■■□□□ 1.88
HMG20B-206ENST00000453933 GDF11O95390 407 aa26.79■■□□□ 1.88
HMG20B-206ENST00000453933 PLEKHH3Q7Z736 793 aa26.79■■□□□ 1.88
HMG20B-206ENST00000453933 METTL16Q86W50 562 aaKnown RBP26.79■■□□□ 1.88
HMG20B-206ENST00000453933 MAPKAPK5Q8IW41 473 aa26.79■■□□□ 1.88
HMG20B-206ENST00000453933 CCAR1Q8IX12 1150 aaKnown RBP26.79■■□□□ 1.88
HMG20B-206ENST00000453933 NOL10Q9BSC4 688 aaKnown RBP26.79■■□□□ 1.88
HMG20B-206ENST00000453933 PAGR1Q9BTK6 254 aa26.79■■□□□ 1.88
HMG20B-206ENST00000453933 EMILIN3Q9NT22 766 aa26.79■■□□□ 1.88
HMG20B-206ENST00000453933 POTEB2H3BUK9 544 aa26.78■■□□□ 1.88
HMG20B-206ENST00000453933 PALD1Q9ULE6 856 aa26.78■■□□□ 1.88
HMG20B-206ENST00000453933 BAG3O95817 575 aa26.77■■□□□ 1.88
HMG20B-206ENST00000453933 GNAI3P08754 354 aa26.77■■□□□ 1.88
HMG20B-206ENST00000453933 PPP4CP60510 307 aa26.77■■□□□ 1.88
HMG20B-206ENST00000453933 NAA16Q6N069 864 aaPredicted RBP26.77■■□□□ 1.88
HMG20B-206ENST00000453933 CRACR2BQ8N4Y2 399 aaPredicted RBP26.77■■□□□ 1.88
HMG20B-206ENST00000453933 APBA2Q99767 749 aa26.77■■□□□ 1.88
HMG20B-206ENST00000453933 SNRKQ9NRH2 765 aa26.77■■□□□ 1.88
HMG20B-206ENST00000453933 ZBTB21Q9ULJ3 1066 aa26.77■■□□□ 1.88
HMG20B-206ENST00000453933 FLT1P17948 1338 aa26.76■■□□□ 1.87
HMG20B-206ENST00000453933 ADGRA1Q86SQ6 560 aa26.76■■□□□ 1.87
HMG20B-206ENST00000453933 GUCD1Q96NT3 240 aa26.76■■□□□ 1.87
HMG20B-206ENST00000453933 GINM1Q9NU53 330 aa26.76■■□□□ 1.87
HMG20B-206ENST00000453933 UQCRFS1P1P0C7P4 283 aa26.75■■□□□ 1.87
HMG20B-206ENST00000453933 RARSP54136 660 aaKnown RBP26.75■■□□□ 1.87
HMG20B-206ENST00000453933 TRIM34Q9BYJ4 488 aa26.75■■□□□ 1.87
HMG20B-206ENST00000453933 UNC80Q8N2C7 3258 aa26.75■■□□□ 1.87
HMG20B-206ENST00000453933 SIPA1L1O43166 1804 aa26.74■■□□□ 1.87
HMG20B-206ENST00000453933 PLCG2P16885 1265 aa26.74■■□□□ 1.87
HMG20B-206ENST00000453933 MAP2K5Q13163 448 aa26.74■■□□□ 1.87
HMG20B-206ENST00000453933 FAM109BQ6ICB4 259 aaPredicted RBP26.74■■□□□ 1.87
HMG20B-206ENST00000453933 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.74■■□□□ 1.87
HMG20B-206ENST00000453933 GTF3C2Q8WUA4 911 aaPredicted RBP26.74■■□□□ 1.87
HMG20B-206ENST00000453933 ARHGAP45Q92619 1136 aa26.74■■□□□ 1.87
HMG20B-206ENST00000453933 EDC3Q96F86 508 aaKnown RBP26.74■■□□□ 1.87
HMG20B-206ENST00000453933 SENP6Q9GZR1 1112 aaPredicted RBP26.74■■□□□ 1.87
HMG20B-206ENST00000453933 FLRT1Q9NZU1 646 aa26.74■■□□□ 1.87
HMG20B-206ENST00000453933 SAP30BPQ9UHR5 308 aaKnown RBP26.74■■□□□ 1.87
HMG20B-206ENST00000453933 NDUFB9Q9Y6M9 179 aa26.74■■□□□ 1.87
HMG20B-206ENST00000453933 CNMDO75829 334 aa26.73■■□□□ 1.87
HMG20B-206ENST00000453933 USP17L2Q6R6M4 530 aa26.73■■□□□ 1.87
HMG20B-206ENST00000453933 G3BP1Q13283 466 aaKnown RBP eCLIP26.72■■□□□ 1.87
HMG20B-206ENST00000453933 FAM161BQ96MY7 647 aa26.72■■□□□ 1.87
HMG20B-206ENST00000453933 LBHD1Q9BQE6 289 aaPredicted RBP26.72■■□□□ 1.87
HMG20B-206ENST00000453933 CWC22Q9HCG8 908 aaKnown RBP26.72■■□□□ 1.87
HMG20B-206ENST00000453933 RABGAP1Q9Y3P9 1069 aa26.72■■□□□ 1.87
HMG20B-206ENST00000453933 PNMA6EA0A0J9YXQ4 647 aa26.71■■□□□ 1.87
HMG20B-206ENST00000453933 GH2P01242 217 aa26.7■■□□□ 1.86
HMG20B-206ENST00000453933 ATN1P54259 1190 aaPredicted RBP26.7■■□□□ 1.86
HMG20B-206ENST00000453933 MFSD14CQ5VZR4 134 aa26.7■■□□□ 1.86
HMG20B-206ENST00000453933 CYP2E1P05181 493 aaPredicted RBP26.69■■□□□ 1.86
HMG20B-206ENST00000453933 ZYXQ15942 572 aaKnown RBP26.69■■□□□ 1.86
HMG20B-206ENST00000453933 DDX20Q9UHI6 824 aaKnown RBP26.69■■□□□ 1.86
HMG20B-206ENST00000453933 USP17L15C9J2P7 530 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 USP17L13C9JLJ4 530 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 USP17L11C9JVI0 530 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 USP17L18D6R9N7 530 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 USP17L22D6RA61 530 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 USP17L17D6RBQ6 530 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 USP17L19D6RCP7 530 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 USP17L20D6RJB6 530 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 GLRX3O76003 335 aaKnown RBP26.68■■□□□ 1.86
HMG20B-206ENST00000453933 PTPREP23469 700 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 CNGA1P29973 690 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 DYNLL1P63167 89 aaKnown RBP26.68■■□□□ 1.86
HMG20B-206ENST00000453933 CCNA1P78396 465 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 USP17L24Q0WX57 530 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 TTC39AQ5SRH9 613 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 WDR78Q5VTH9 848 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 C12orf42Q96LP6 360 aa26.68■■□□□ 1.86
HMG20B-206ENST00000453933 SLC15A5A6NIM6 579 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms