RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 ARMC5Q96C12 935 aa17.11■□□□□ 0.33
RFTN1-207ENST00000453536 ZNF333Q96JL9 665 aa17.11■□□□□ 0.33
RFTN1-207ENST00000453536 PARK7Q99497 189 aaKnown RBP17.11■□□□□ 0.33
RFTN1-207ENST00000453536 PAG1Q9NWQ8 432 aa17.11■□□□□ 0.33
RFTN1-207ENST00000453536 ZBTB21Q9ULJ3 1066 aa17.11■□□□□ 0.33
RFTN1-207ENST00000453536 AGTPBP1Q9UPW5 1226 aa17.11■□□□□ 0.33
RFTN1-207ENST00000453536 GH2P01242 217 aa17.1■□□□□ 0.33
RFTN1-207ENST00000453536 PLCG2P16885 1265 aa17.1■□□□□ 0.33
RFTN1-207ENST00000453536 LRRCC1Q9C099 1032 aa17.1■□□□□ 0.33
RFTN1-207ENST00000453536 HERC5Q9UII4 1024 aaKnown RBP17.1■□□□□ 0.33
RFTN1-207ENST00000453536 USP17L5A8MUK1 530 aa17.09■□□□□ 0.33
RFTN1-207ENST00000453536 MBD4O95243 580 aa17.09■□□□□ 0.33
RFTN1-207ENST00000453536 FMNL1O95466 1100 aaPredicted RBP17.09■□□□□ 0.33
RFTN1-207ENST00000453536 ATP5JP18859 108 aa17.09■□□□□ 0.33
RFTN1-207ENST00000453536 SHMT1P34896 483 aa17.09■□□□□ 0.33
RFTN1-207ENST00000453536 ADD2P35612 726 aa17.09■□□□□ 0.33
RFTN1-207ENST00000453536 SLC9C1Q4G0N8 1177 aa17.09■□□□□ 0.33
RFTN1-207ENST00000453536 ACER1Q8TDN7 264 aa17.09■□□□□ 0.33
RFTN1-207ENST00000453536 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.09■□□□□ 0.33
RFTN1-207ENST00000453536 DYNLL2Q96FJ2 89 aa17.09■□□□□ 0.33
RFTN1-207ENST00000453536 HAUS7Q99871 368 aa17.09■□□□□ 0.33
RFTN1-207ENST00000453536 DHX36Q9H2U1 1008 aaKnown RBP17.09■□□□□ 0.33
RFTN1-207ENST00000453536 MYPNQ86TC9 1320 aa17.08■□□□□ 0.32
RFTN1-207ENST00000453536 GUCY1A2P33402 732 aa17.08■□□□□ 0.32
RFTN1-207ENST00000453536 FASTKD5Q7L8L6 764 aaKnown RBP17.08■□□□□ 0.32
RFTN1-207ENST00000453536 DCTPP1Q9H773 170 aa17.08■□□□□ 0.32
RFTN1-207ENST00000453536 SRRDQ9UH36 339 aa17.08■□□□□ 0.32
RFTN1-207ENST00000453536 ELNP15502 786 aa17.07■□□□□ 0.32
RFTN1-207ENST00000453536 SMCR8Q8TEV9 937 aaPredicted RBP17.07■□□□□ 0.32
RFTN1-207ENST00000453536 PUS7LQ9H0K6 701 aaKnown RBP17.07■□□□□ 0.32
RFTN1-207ENST00000453536 ASCC2Q9H1I8 757 aaPredicted RBP17.07■□□□□ 0.32
RFTN1-207ENST00000453536 TXNRD2Q9NNW7 524 aa17.07■□□□□ 0.32
RFTN1-207ENST00000453536 DCP1AQ9NPI6 582 aaPredicted RBP17.07■□□□□ 0.32
RFTN1-207ENST00000453536 EMILIN3Q9NT22 766 aa17.07■□□□□ 0.32
RFTN1-207ENST00000453536 RLFQ13129 1914 aa17.07■□□□□ 0.32
RFTN1-207ENST00000453536 PARP14Q460N5 1801 aa17.06■□□□□ 0.32
RFTN1-207ENST00000453536 HLA-DOAP06340 250 aa17.06■□□□□ 0.32
RFTN1-207ENST00000453536 KIF22Q14807 665 aa17.06■□□□□ 0.32
RFTN1-207ENST00000453536 TTF1Q15361 905 aaPredicted RBP17.06■□□□□ 0.32
RFTN1-207ENST00000453536 TATDN1Q6P1N9 297 aa17.06■□□□□ 0.32
RFTN1-207ENST00000453536 FOXP4Q8IVH2 680 aaPredicted RBP17.06■□□□□ 0.32
RFTN1-207ENST00000453536 TRIM34Q9BYJ4 488 aa17.06■□□□□ 0.32
RFTN1-207ENST00000453536 MCM9Q9NXL9 1143 aa17.06■□□□□ 0.32
RFTN1-207ENST00000453536 SERPINB13Q9UIV8 391 aa17.06■□□□□ 0.32
RFTN1-207ENST00000453536 BACE1P56817 501 aa17.05■□□□□ 0.32
RFTN1-207ENST00000453536 GABPAQ06546 454 aa17.05■□□□□ 0.32
RFTN1-207ENST00000453536 RAB3GAP1Q15042 981 aa17.05■□□□□ 0.32
RFTN1-207ENST00000453536 SH3D19Q5HYK7 790 aa17.05■□□□□ 0.32
RFTN1-207ENST00000453536 STK11IPQ8N1F8 1099 aa17.05■□□□□ 0.32
RFTN1-207ENST00000453536 PROCA1Q8NCQ7 364 aaPredicted RBP17.05■□□□□ 0.32
RFTN1-207ENST00000453536 SHISA4Q96DD7 197 aa17.05■□□□□ 0.32
RFTN1-207ENST00000453536 P2RX7Q99572 595 aaKnown RBP17.05■□□□□ 0.32
RFTN1-207ENST00000453536 WDR18Q9BV38 432 aa17.05■□□□□ 0.32
RFTN1-207ENST00000453536 POLR3DP05423 398 aaPredicted RBP17.04■□□□□ 0.32
RFTN1-207ENST00000453536 ASNSP08243 561 aa17.04■□□□□ 0.32
RFTN1-207ENST00000453536 SEPT2Q15019 361 aa17.04■□□□□ 0.32
RFTN1-207ENST00000453536 KIAA1755Q5JYT7 1200 aa17.04■□□□□ 0.32
RFTN1-207ENST00000453536 CRNKL1Q9BZJ0 848 aaKnown RBP17.04■□□□□ 0.32
RFTN1-207ENST00000453536 TAOK2Q9UL54 1235 aa17.04■□□□□ 0.32
RFTN1-207ENST00000453536 COL11A1P12107 1806 aaPredicted RBP17.03■□□□□ 0.32
RFTN1-207ENST00000453536 A0A1W2PRG0 241 aa17.03■□□□□ 0.32
RFTN1-207ENST00000453536 FLT3LGP49771 235 aa17.03■□□□□ 0.32
RFTN1-207ENST00000453536 FCGRTP55899 365 aa17.03■□□□□ 0.32
RFTN1-207ENST00000453536 TRIM32Q13049 653 aa17.03■□□□□ 0.32
RFTN1-207ENST00000453536 RAET1EQ8TD07 263 aa17.03■□□□□ 0.32
RFTN1-207ENST00000453536 EHD4Q9H223 541 aa17.03■□□□□ 0.32
RFTN1-207ENST00000453536 ECHDC1Q9NTX5 307 aa17.03■□□□□ 0.32
RFTN1-207ENST00000453536 SLC45A1Q9Y2W3 748 aa17.03■□□□□ 0.32
RFTN1-207ENST00000453536 GREB1LQ9C091 1923 aaPredicted RBP17.03■□□□□ 0.32
RFTN1-207ENST00000453536 ALPK3Q96L96 1907 aa17.02■□□□□ 0.32
RFTN1-207ENST00000453536 USP17L10C9JJH3 530 aa17.02■□□□□ 0.32
RFTN1-207ENST00000453536 M0R2C6 588 aa17.02■□□□□ 0.32
RFTN1-207ENST00000453536 TNPO2O14787 897 aaKnown RBP17.02■□□□□ 0.32
RFTN1-207ENST00000453536 AKR1B1P15121 316 aa17.02■□□□□ 0.32
RFTN1-207ENST00000453536 ABCB5Q2M3G0 1257 aa17.02■□□□□ 0.32
RFTN1-207ENST00000453536 Q3C1V9 767 aa17.02■□□□□ 0.32
RFTN1-207ENST00000453536 CERKLQ49MI3 558 aaPredicted RBP17.02■□□□□ 0.32
RFTN1-207ENST00000453536 OSBP2Q969R2 916 aa17.02■□□□□ 0.32
RFTN1-207ENST00000453536 SEC62Q99442 399 aaKnown RBP17.02■□□□□ 0.32
RFTN1-207ENST00000453536 UNC93B1Q9H1C4 597 aa17.02■□□□□ 0.32
RFTN1-207ENST00000453536 AS3MTQ9HBK9 375 aa17.02■□□□□ 0.32
RFTN1-207ENST00000453536 PCDH10Q9P2E7 1040 aa17.02■□□□□ 0.32
RFTN1-207ENST00000453536 GRK4P32298 578 aa17.01■□□□□ 0.31
RFTN1-207ENST00000453536 PI4K2BQ8TCG2 481 aa17.01■□□□□ 0.31
RFTN1-207ENST00000453536 PORCNQ9H237 461 aa17.01■□□□□ 0.31
RFTN1-207ENST00000453536 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
RFTN1-207ENST00000453536 A0A0G2JMZ2 1700 aa17.01■□□□□ 0.31
RFTN1-207ENST00000453536 MPHOSPH10O00566 681 aaKnown RBP17■□□□□ 0.31
RFTN1-207ENST00000453536 CEP290O15078 2479 aa17■□□□□ 0.31
RFTN1-207ENST00000453536 CNMDO75829 334 aa17■□□□□ 0.31
RFTN1-207ENST00000453536 HERVK_113P62684 666 aa17■□□□□ 0.31
RFTN1-207ENST00000453536 FAM110CQ1W6H9 321 aa17■□□□□ 0.31
RFTN1-207ENST00000453536 TTC6Q86TZ1 520 aa17■□□□□ 0.31
RFTN1-207ENST00000453536 SIAH1Q8IUQ4 282 aa17■□□□□ 0.31
RFTN1-207ENST00000453536 FEZ1Q99689 392 aa17■□□□□ 0.31
RFTN1-207ENST00000453536 PAGR1Q9BTK6 254 aa17■□□□□ 0.31
RFTN1-207ENST00000453536 EPB41L4AQ9HCS5 686 aaPredicted RBP17■□□□□ 0.31
RFTN1-207ENST00000453536 TMOD4Q9NZQ9 345 aa17■□□□□ 0.31
RFTN1-207ENST00000453536 RBPJLQ9UBG7 517 aa17■□□□□ 0.31
RFTN1-207ENST00000453536 SLC4A4Q9Y6R1 1079 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms