RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 IL1RAPL2Q9NP60 686 aa22.39■■□□□ 1.17
PDLIM2-214ENST00000452226 RAB11FIP3O75154 756 aa22.38■■□□□ 1.17
PDLIM2-214ENST00000452226 UBXN2AP68543 259 aa22.38■■□□□ 1.17
PDLIM2-214ENST00000452226 JAG1P78504 1218 aa22.38■■□□□ 1.17
PDLIM2-214ENST00000452226 MAP3K12Q12852 859 aa22.38■■□□□ 1.17
PDLIM2-214ENST00000452226 FAM110CQ1W6H9 321 aa22.38■■□□□ 1.17
PDLIM2-214ENST00000452226 KIF1BPQ96EK5 621 aa22.38■■□□□ 1.17
PDLIM2-214ENST00000452226 ADCY3O60266 1144 aa22.37■■□□□ 1.17
PDLIM2-214ENST00000452226 GDF11O95390 407 aa22.37■■□□□ 1.17
PDLIM2-214ENST00000452226 GCLCP48506 637 aaPredicted RBP22.37■■□□□ 1.17
PDLIM2-214ENST00000452226 MTMR2Q13614 643 aa22.37■■□□□ 1.17
PDLIM2-214ENST00000452226 SHROOM1Q2M3G4 852 aaPredicted RBP22.37■■□□□ 1.17
PDLIM2-214ENST00000452226 CERS3Q8IU89 383 aa22.37■■□□□ 1.17
PDLIM2-214ENST00000452226 SHISA4Q96DD7 197 aa22.37■■□□□ 1.17
PDLIM2-214ENST00000452226 RNF208Q9H0X6 261 aa22.37■■□□□ 1.17
PDLIM2-214ENST00000452226 ASCC2Q9H1I8 757 aaPredicted RBP22.37■■□□□ 1.17
PDLIM2-214ENST00000452226 APBB1O00213 710 aa22.36■■□□□ 1.17
PDLIM2-214ENST00000452226 GJB1P08034 283 aa22.36■■□□□ 1.17
PDLIM2-214ENST00000452226 USP5P45974 858 aa22.36■■□□□ 1.17
PDLIM2-214ENST00000452226 BACE1P56817 501 aa22.36■■□□□ 1.17
PDLIM2-214ENST00000452226 COA7Q96BR5 231 aa22.36■■□□□ 1.17
PDLIM2-214ENST00000452226 GINM1Q9NU53 330 aa22.36■■□□□ 1.17
PDLIM2-214ENST00000452226 ELNP15502 786 aa22.35■■□□□ 1.17
PDLIM2-214ENST00000452226 IRF5Q13568 498 aa22.35■■□□□ 1.17
PDLIM2-214ENST00000452226 TMED8Q6PL24 325 aaPredicted RBP22.35■■□□□ 1.17
PDLIM2-214ENST00000452226 CLASRPQ8N2M8 674 aaKnown RBP22.35■■□□□ 1.17
PDLIM2-214ENST00000452226 TMOD4Q9NZQ9 345 aa22.35■■□□□ 1.17
PDLIM2-214ENST00000452226 ZBTB21Q9ULJ3 1066 aa22.35■■□□□ 1.17
PDLIM2-214ENST00000452226 GJA8P48165 433 aa22.34■■□□□ 1.17
PDLIM2-214ENST00000452226 PXYLP1Q8TE99 480 aa22.34■■□□□ 1.17
PDLIM2-214ENST00000452226 CRBNQ96SW2 442 aa22.34■■□□□ 1.17
PDLIM2-214ENST00000452226 TAOK2Q9UL54 1235 aa22.34■■□□□ 1.17
PDLIM2-214ENST00000452226 PCDHB15Q9Y5E8 787 aa22.34■■□□□ 1.17
PDLIM2-214ENST00000452226 C19orf81C9J6K1 198 aa22.33■■□□□ 1.17
PDLIM2-214ENST00000452226 USP17L10C9JJH3 530 aa22.33■■□□□ 1.17
PDLIM2-214ENST00000452226 IRX3P78415 501 aaPredicted RBP22.33■■□□□ 1.17
PDLIM2-214ENST00000452226 TTF1Q15361 905 aaPredicted RBP22.33■■□□□ 1.17
PDLIM2-214ENST00000452226 DPF3Q92784 378 aa22.33■■□□□ 1.17
PDLIM2-214ENST00000452226 BCL11AQ9H165 835 aa22.33■■□□□ 1.17
PDLIM2-214ENST00000452226 UNC93B1Q9H1C4 597 aa22.33■■□□□ 1.17
PDLIM2-214ENST00000452226 DCTPP1Q9H773 170 aa22.33■■□□□ 1.17
PDLIM2-214ENST00000452226 INHAP05111 366 aa22.32■■□□□ 1.16
PDLIM2-214ENST00000452226 HTATIP2Q9BUP3 242 aa22.32■■□□□ 1.16
PDLIM2-214ENST00000452226 COLQQ9Y215 455 aaPredicted RBP22.32■■□□□ 1.16
PDLIM2-214ENST00000452226 H0YGN5 161 aa22.31■■□□□ 1.16
PDLIM2-214ENST00000452226 GH2P01242 217 aa22.31■■□□□ 1.16
PDLIM2-214ENST00000452226 IFIT2P09913 472 aaKnown RBP22.31■■□□□ 1.16
PDLIM2-214ENST00000452226 HOXA7P31268 230 aaPredicted RBP22.31■■□□□ 1.16
PDLIM2-214ENST00000452226 RIOK1Q9BRS2 568 aaKnown RBP22.31■■□□□ 1.16
PDLIM2-214ENST00000452226 SERPINB13Q9UIV8 391 aa22.31■■□□□ 1.16
PDLIM2-214ENST00000452226 MAGEB6P1A0A0J9YX57 407 aa22.3■■□□□ 1.16
PDLIM2-214ENST00000452226 PDE6AP16499 860 aa22.3■■□□□ 1.16
PDLIM2-214ENST00000452226 CAPN2P17655 700 aa22.3■■□□□ 1.16
PDLIM2-214ENST00000452226 FXR1P51114 621 aaKnown RBP eCLIP22.3■■□□□ 1.16
PDLIM2-214ENST00000452226 SLC9C2Q5TAH2 1124 aa22.3■■□□□ 1.16
PDLIM2-214ENST00000452226 TATDN1Q6P1N9 297 aa22.3■■□□□ 1.16
PDLIM2-214ENST00000452226 TTC6Q86TZ1 520 aa22.3■■□□□ 1.16
PDLIM2-214ENST00000452226 U2AF1L4Q8WU68 220 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-214ENST00000452226 DNAJC2Q99543 621 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-214ENST00000452226 P2RX7Q99572 595 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-214ENST00000452226 EHD4Q9H223 541 aa22.3■■□□□ 1.16
PDLIM2-214ENST00000452226 MORF4L1Q9UBU8 362 aa22.3■■□□□ 1.16
PDLIM2-214ENST00000452226 GOLIM4O00461 696 aa22.29■■□□□ 1.16
PDLIM2-214ENST00000452226 HERVK_113P62684 666 aa22.29■■□□□ 1.16
PDLIM2-214ENST00000452226 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.29■■□□□ 1.16
PDLIM2-214ENST00000452226 NAV1Q8NEY1 1877 aa22.28■■□□□ 1.16
PDLIM2-214ENST00000452226 SGPL1O95470 568 aa22.28■■□□□ 1.16
PDLIM2-214ENST00000452226 USP17L2Q6R6M4 530 aa22.28■■□□□ 1.16
PDLIM2-214ENST00000452226 UBE2Q1Q7Z7E8 422 aa22.28■■□□□ 1.16
PDLIM2-214ENST00000452226 LRRCC1Q9C099 1032 aa22.28■■□□□ 1.16
PDLIM2-214ENST00000452226 EMILIN3Q9NT22 766 aa22.28■■□□□ 1.16
PDLIM2-214ENST00000452226 NR2E3Q9Y5X4 410 aa22.28■■□□□ 1.16
PDLIM2-214ENST00000452226 PLCD1P51178 756 aa22.27■■□□□ 1.16
PDLIM2-214ENST00000452226 AAMPQ13685 434 aa22.27■■□□□ 1.16
PDLIM2-214ENST00000452226 CERKLQ49MI3 558 aaPredicted RBP22.27■■□□□ 1.16
PDLIM2-214ENST00000452226 DDX60LQ5H9U9 1706 aaKnown RBP22.27■■□□□ 1.16
PDLIM2-214ENST00000452226 CRNKL1Q9BZJ0 848 aaKnown RBP22.27■■□□□ 1.16
PDLIM2-214ENST00000452226 GJD2Q9UKL4 321 aa22.27■■□□□ 1.16
PDLIM2-214ENST00000452226 TRIOBPQ9H2D6 2365 aa22.27■■□□□ 1.16
PDLIM2-214ENST00000452226 ZNF532Q9HCE3 1301 aa22.27■■□□□ 1.16
PDLIM2-214ENST00000452226 PLXNB2O15031 1838 aa22.27■■□□□ 1.15
PDLIM2-214ENST00000452226 PEX10O60683 326 aa22.26■■□□□ 1.15
PDLIM2-214ENST00000452226 FARP2O94887 1054 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-214ENST00000452226 POLR3DP05423 398 aaPredicted RBP22.26■■□□□ 1.15
PDLIM2-214ENST00000452226 RAB3GAP1Q15042 981 aa22.26■■□□□ 1.15
PDLIM2-214ENST00000452226 ABCB5Q2M3G0 1257 aa22.26■■□□□ 1.15
PDLIM2-214ENST00000452226 GPRC5AQ8NFJ5 357 aa22.26■■□□□ 1.15
PDLIM2-214ENST00000452226 EDC3Q96F86 508 aaKnown RBP22.26■■□□□ 1.15
PDLIM2-214ENST00000452226 DEFB118Q96PH6 123 aa22.26■■□□□ 1.15
PDLIM2-214ENST00000452226 FEZ1Q99689 392 aa22.26■■□□□ 1.15
PDLIM2-214ENST00000452226 TXNRD2Q9NNW7 524 aa22.26■■□□□ 1.15
PDLIM2-214ENST00000452226 TCRBV5S4A2TA0A5A2 114 aa22.25■■□□□ 1.15
PDLIM2-214ENST00000452226 TFRCP02786 760 aaKnown RBP22.25■■□□□ 1.15
PDLIM2-214ENST00000452226 SHMT1P34896 483 aa22.25■■□□□ 1.15
PDLIM2-214ENST00000452226 ZYXQ15942 572 aaKnown RBP22.25■■□□□ 1.15
PDLIM2-214ENST00000452226 PAK6Q9NQU5 681 aaPredicted RBP22.25■■□□□ 1.15
PDLIM2-214ENST00000452226 RBPJLQ9UBG7 517 aa22.25■■□□□ 1.15
PDLIM2-214ENST00000452226 SMARCA5O60264 1052 aaPredicted RBP22.24■■□□□ 1.15
PDLIM2-214ENST00000452226 HMGCRP04035 888 aa22.24■■□□□ 1.15
PDLIM2-214ENST00000452226 GTF3C2Q8WUA4 911 aaPredicted RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms