RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CYP21A2P08686 494 aa15.47■□□□□ 0.07
VPS33A-202ENST00000451053 RASA1P20936 1047 aa15.47■□□□□ 0.07
VPS33A-202ENST00000451053 RGMBQ6NW40 437 aa15.47■□□□□ 0.07
VPS33A-202ENST00000451053 CCDC84Q86UT8 332 aaPredicted RBP15.47■□□□□ 0.07
VPS33A-202ENST00000451053 SCYL3Q8IZE3 742 aa15.47■□□□□ 0.07
VPS33A-202ENST00000451053 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
VPS33A-202ENST00000451053 MKNK2Q9HBH9 465 aa15.47■□□□□ 0.07
VPS33A-202ENST00000451053 TAF6LQ9Y6J9 622 aa15.47■□□□□ 0.07
VPS33A-202ENST00000451053 MYH8P13535 1937 aa15.47■□□□□ 0.07
VPS33A-202ENST00000451053 FGRP09769 529 aa15.46■□□□□ 0.07
VPS33A-202ENST00000451053 AKR1B1P15121 316 aa15.46■□□□□ 0.07
VPS33A-202ENST00000451053 ZNF157P51786 506 aaPredicted RBP15.46■□□□□ 0.07
VPS33A-202ENST00000451053 PDE4BQ07343 736 aa15.46■□□□□ 0.07
VPS33A-202ENST00000451053 ABCB5Q2M3G0 1257 aa15.46■□□□□ 0.07
VPS33A-202ENST00000451053 DEFB115Q30KQ5 88 aa15.46■□□□□ 0.07
VPS33A-202ENST00000451053 RASAL3Q86YV0 1011 aa15.46■□□□□ 0.07
VPS33A-202ENST00000451053 STAG1Q8WVM7 1258 aa15.46■□□□□ 0.07
VPS33A-202ENST00000451053 SLC10A4Q96EP9 437 aa15.46■□□□□ 0.07
VPS33A-202ENST00000451053 HHIPL1Q96JK4 782 aa15.46■□□□□ 0.07
VPS33A-202ENST00000451053 ZBTB21Q9ULJ3 1066 aa15.46■□□□□ 0.07
VPS33A-202ENST00000451053 NEDD4P46934 1319 aa15.45■□□□□ 0.06
VPS33A-202ENST00000451053 MPHOSPH10O00566 681 aaKnown RBP15.45■□□□□ 0.06
VPS33A-202ENST00000451053 SLC27A2O14975 620 aa15.45■□□□□ 0.06
VPS33A-202ENST00000451053 EPB41L2O43491 1005 aaKnown RBP15.45■□□□□ 0.06
VPS33A-202ENST00000451053 GH2P01242 217 aa15.45■□□□□ 0.06
VPS33A-202ENST00000451053 PTPRAP18433 802 aa15.45■□□□□ 0.06
VPS33A-202ENST00000451053 GUCY1A2P33402 732 aa15.45■□□□□ 0.06
VPS33A-202ENST00000451053 GJA5P36382 358 aa15.45■□□□□ 0.06
VPS33A-202ENST00000451053 NECTIN1Q15223 517 aa15.45■□□□□ 0.06
VPS33A-202ENST00000451053 AKNAD1Q5T1N1 836 aa15.45■□□□□ 0.06
VPS33A-202ENST00000451053 CREB3L3Q68CJ9 461 aa15.45■□□□□ 0.06
VPS33A-202ENST00000451053 CYP4F22Q6NT55 531 aa15.45■□□□□ 0.06
VPS33A-202ENST00000451053 PAXIP1Q6ZW49 1069 aaPredicted RBP15.45■□□□□ 0.06
VPS33A-202ENST00000451053 NKX2-3Q8TAU0 364 aa15.45■□□□□ 0.06
VPS33A-202ENST00000451053 OPTNQ96CV9 577 aa15.45■□□□□ 0.06
VPS33A-202ENST00000451053 PICK1Q9NRD5 415 aa15.45■□□□□ 0.06
VPS33A-202ENST00000451053 SPDYE5A6NIY4 337 aa15.44■□□□□ 0.06
VPS33A-202ENST00000451053 FAM155AB1AL88 458 aaPredicted RBP15.44■□□□□ 0.06
VPS33A-202ENST00000451053 ORC4O43929 436 aa15.44■□□□□ 0.06
VPS33A-202ENST00000451053 SEC24BO95487 1268 aa15.44■□□□□ 0.06
VPS33A-202ENST00000451053 SLC10A3P09131 477 aa15.44■□□□□ 0.06
VPS33A-202ENST00000451053 MKRN3Q13064 507 aaKnown RBP15.44■□□□□ 0.06
VPS33A-202ENST00000451053 GRM1Q13255 1194 aa15.44■□□□□ 0.06
VPS33A-202ENST00000451053 SEPT2Q15019 361 aa15.44■□□□□ 0.06
VPS33A-202ENST00000451053 FAM47AQ5JRC9 791 aa15.44■□□□□ 0.06
VPS33A-202ENST00000451053 RRP12Q5JTH9 1297 aaKnown RBP15.44■□□□□ 0.06
VPS33A-202ENST00000451053 MFSD6Q6ZSS7 791 aa15.44■□□□□ 0.06
VPS33A-202ENST00000451053 OTUD5Q96G74 571 aa15.44■□□□□ 0.06
VPS33A-202ENST00000451053 WNK4Q96J92 1243 aa15.44■□□□□ 0.06
VPS33A-202ENST00000451053 CCDC17Q96LX7 622 aa15.44■□□□□ 0.06
VPS33A-202ENST00000451053 ZNF287Q9HBT7 754 aa15.44■□□□□ 0.06
VPS33A-202ENST00000451053 TOMM22Q9NS69 142 aa15.44■□□□□ 0.06
VPS33A-202ENST00000451053 ASNSP08243 561 aa15.43■□□□□ 0.06
VPS33A-202ENST00000451053 RAB3GAP1Q15042 981 aa15.43■□□□□ 0.06
VPS33A-202ENST00000451053 SPRYD7Q5W111 196 aa15.43■□□□□ 0.06
VPS33A-202ENST00000451053 STOX1Q6ZVD7 989 aa15.43■□□□□ 0.06
VPS33A-202ENST00000451053 ERO1BQ86YB8 467 aa15.43■□□□□ 0.06
VPS33A-202ENST00000451053 CLEC10AQ8IUN9 316 aa15.43■□□□□ 0.06
VPS33A-202ENST00000451053 ZNF444Q8N0Y2 327 aaPredicted RBP15.43■□□□□ 0.06
VPS33A-202ENST00000451053 CAPNS2Q96L46 248 aa15.43■□□□□ 0.06
VPS33A-202ENST00000451053 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.43■□□□□ 0.06
VPS33A-202ENST00000451053 USP26Q9BXU7 913 aa15.43■□□□□ 0.06
VPS33A-202ENST00000451053 RNF41Q9H4P4 317 aaPredicted RBP15.43■□□□□ 0.06
VPS33A-202ENST00000451053 CABP5Q9NP86 173 aa15.43■□□□□ 0.06
VPS33A-202ENST00000451053 GINM1Q9NU53 330 aa15.43■□□□□ 0.06
VPS33A-202ENST00000451053 ZHX2Q9Y6X8 837 aa15.43■□□□□ 0.06
VPS33A-202ENST00000451053 GREB1LQ9C091 1923 aaPredicted RBP15.43■□□□□ 0.06
VPS33A-202ENST00000451053 PHIPQ8WWQ0 1821 aa15.43■□□□□ 0.06
VPS33A-202ENST00000451053 USP17L5A8MUK1 530 aa15.42■□□□□ 0.06
VPS33A-202ENST00000451053 E7EWF7 191 aa15.42■□□□□ 0.06
VPS33A-202ENST00000451053 RANBP6O60518 1105 aaKnown RBP15.42■□□□□ 0.06
VPS33A-202ENST00000451053 PCP11498 1178 aaKnown RBP15.42■□□□□ 0.06
VPS33A-202ENST00000451053 TFAP4Q01664 338 aa15.42■□□□□ 0.06
VPS33A-202ENST00000451053 PPATQ06203 517 aa15.42■□□□□ 0.06
VPS33A-202ENST00000451053 TMEM179Q6ZVK1 233 aa15.42■□□□□ 0.06
VPS33A-202ENST00000451053 CCDC102AQ96A19 550 aa15.42■□□□□ 0.06
VPS33A-202ENST00000451053 PLIN4Q96Q06 1357 aa15.41■□□□□ 0.06
VPS33A-202ENST00000451053 IGKV6D-41A0A0C4DH26 115 aa15.41■□□□□ 0.06
VPS33A-202ENST00000451053 B4E1Z4 1266 aa15.41■□□□□ 0.06
VPS33A-202ENST00000451053 IRF6O14896 467 aa15.41■□□□□ 0.06
VPS33A-202ENST00000451053 TSPY3P0CV98 308 aa15.41■□□□□ 0.06
VPS33A-202ENST00000451053 TSPY8P0CW00 308 aa15.41■□□□□ 0.06
VPS33A-202ENST00000451053 HSPA4P34932 840 aa15.41■□□□□ 0.06
VPS33A-202ENST00000451053 VEGFBP49765 207 aa15.41■□□□□ 0.06
VPS33A-202ENST00000451053 PPIL2Q13356 520 aa15.41■□□□□ 0.06
VPS33A-202ENST00000451053 RASEFQ8IZ41 740 aa15.41■□□□□ 0.06
VPS33A-202ENST00000451053 NEDD1Q8NHV4 660 aa15.41■□□□□ 0.06
VPS33A-202ENST00000451053 TSPY2A6NKD2 308 aa15.4■□□□□ 0.06
VPS33A-202ENST00000451053 AOC2O75106 756 aa15.4■□□□□ 0.06
VPS33A-202ENST00000451053 KDM4AO75164 1064 aa15.4■□□□□ 0.06
VPS33A-202ENST00000451053 ZBTB48P10074 688 aaPredicted RBP15.4■□□□□ 0.06
VPS33A-202ENST00000451053 RNF20Q5VTR2 975 aa15.4■□□□□ 0.06
VPS33A-202ENST00000451053 KCNB2Q92953 911 aa15.4■□□□□ 0.06
VPS33A-202ENST00000451053 ZIC5Q96T25 663 aa15.4■□□□□ 0.06
VPS33A-202ENST00000451053 AFG3L2Q9Y4W6 797 aa15.4■□□□□ 0.06
VPS33A-202ENST00000451053 WDR33Q9C0J8 1336 aaKnown RBP15.4■□□□□ 0.06
VPS33A-202ENST00000451053 TRIM75PA6NK02 468 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 NMT2O60551 498 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 MCCP23508 829 aa15.39■□□□□ 0.05
VPS33A-202ENST00000451053 ECE1P42892 770 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms