RNA–Protein interactions for RNA: ENST00000450829.5

TM9SF4-205, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-205ENST00000450829 RCAN1P53805 252 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 PPP4CP60510 307 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 CXCL9Q07325 125 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 KIAA2012Q0VF49 1180 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 SART3Q15020 963 aaKnown RBP6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 SEC23AQ15436 765 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 DIXDC1Q155Q3 683 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 RRP12Q5JTH9 1297 aaKnown RBP6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 MFSD14BQ5SR56 506 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 PNMA8AQ86V59 439 aaPredicted RBP6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 FAM184AQ8NB25 1140 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 RGS22Q8NE09 1264 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 GPT2Q8TD30 523 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 SH3RF3Q8TEJ3 882 aaPredicted RBP6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 ESR2Q92731 530 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 DDX11Q96FC9 970 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 EYA3Q99504 573 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 NOL10Q9BSC4 688 aaKnown RBP6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 SENP2Q9HC62 589 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 INCENPQ9NQS7 918 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 GPRC5DQ9NZD1 345 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 ZSWIM5Q9P217 1185 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 CLEC11AQ9Y240 323 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 CNPY2Q9Y2B0 182 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 SUGT1Q9Y2Z0 365 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 DDX49Q9Y6V7 483 aaKnown RBP6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 TNKSO95271 1327 aa6.75□□□□□ -1.33
TM9SF4-205ENST00000450829 CYP2D7A0A087X1C5 515 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 GPR75-ASB3A0A0A6YYF3 556 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 SHTN1A0MZ66 631 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 CCDC69A6NI79 296 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 GOLGA8AA7E2F4 631 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 YDJCA8MPS7 323 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 USP17L12C9JPN9 530 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 USP17L21D6R901 530 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 H3BQV1 296 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 FIBPO43427 364 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 CDKL5O76039 1030 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 BAG3O95817 575 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 CYP2D6P10635 497 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 HSPA8P11142 646 aaKnown RBP6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 FDPSP14324 419 aaKnown RBP6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 PLCG2P16885 1265 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 BTDP43251 543 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 NT5C2P49902 561 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 GMPSP49915 693 aaPredicted RBP6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 DNM1Q05193 864 aaKnown RBP6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 WTAPQ15007 396 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 FOXD4L6Q3SYB3 417 aaPredicted RBP6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 FOXD4L3Q6VB84 417 aaPredicted RBP6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 NFXL1Q6ZNB6 911 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 FERMT3Q86UX7 667 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 MICU3Q86XE3 530 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 RAB11FIP4Q86YS3 637 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 SLF2Q8IX21 1173 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 TRPM4Q8TD43 1214 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 FAM163AQ96GL9 167 aaPredicted RBP6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 UBAC1Q9BSL1 405 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 GDPD2Q9HCC8 539 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 TOMM22Q9NS69 142 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 WBP1LQ9NX94 342 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 ISY1Q9ULR0 285 aaKnown RBP6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 ZNRF3Q9ULT6 936 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 DAGLAQ9Y4D2 1042 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 RBBP6Q7Z6E9 1792 aaKnown RBP6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 ELP1O95163 1332 aa6.74□□□□□ -1.33
TM9SF4-205ENST00000450829 PLIN4Q96Q06 1357 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 ERICH2A1L162 156 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 FSD2A1L4K1 749 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 CPLX1O14810 134 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 RIMBP2O15034 1052 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 RANBP6O60518 1105 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 RAD17O75943 681 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 SLC3A2P08195 630 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 NCLP19338 710 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 RXRAP19793 462 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 CDK11BP21127 795 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 CDC27P30260 824 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 USP5P45974 858 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 RHBDL3P58872 404 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 FKBP1AP62942 108 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 GTF2IP78347 998 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 KRT85P78386 507 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 NTRK3Q16288 839 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 CSPP1Q1MSJ5 1256 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 C12orf60Q5U649 245 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 CST9Q5W186 159 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 CAVIN1Q6NZI2 390 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 CPLX2Q6PUV4 134 aaKnown RBP6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 USP50Q70EL3 339 aaPredicted RBP6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 USP48Q86UV5 1035 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 TEX11Q8IYF3 940 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 ZNF654Q8IZM8 581 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 STK11IPQ8N1F8 1099 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 CERS5Q8N5B7 392 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 ENAHQ8N8S7 591 aaPredicted RBP6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 SUPT20HQ8NEM7 779 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 ZKSCAN3Q9BRR0 538 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 MYL10Q9BUA6 226 aa6.73□□□□□ -1.33
TM9SF4-205ENST00000450829 ZC3H12CQ9C0D7 883 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms