RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 JAG1P78504 1218 aa21■□□□□ 0.95
CLTCL1-203ENST00000449918 MTMR2Q13614 643 aa21■□□□□ 0.95
CLTCL1-203ENST00000449918 TATDN1Q6P1N9 297 aa21■□□□□ 0.95
CLTCL1-203ENST00000449918 ANKRD13CQ8N6S4 541 aa21■□□□□ 0.95
CLTCL1-203ENST00000449918 TCRBV5S4A2TA0A5A2 114 aa20.99■□□□□ 0.95
CLTCL1-203ENST00000449918 USP17L10C9JJH3 530 aa20.99■□□□□ 0.95
CLTCL1-203ENST00000449918 EDC3Q96F86 508 aaKnown RBP20.99■□□□□ 0.95
CLTCL1-203ENST00000449918 DCTPP1Q9H773 170 aa20.99■□□□□ 0.95
CLTCL1-203ENST00000449918 SMARCA5O60264 1052 aaPredicted RBP20.98■□□□□ 0.95
CLTCL1-203ENST00000449918 GH2P01242 217 aa20.98■□□□□ 0.95
CLTCL1-203ENST00000449918 EN2P19622 333 aaPredicted RBP20.98■□□□□ 0.95
CLTCL1-203ENST00000449918 GRK4P32298 578 aa20.98■□□□□ 0.95
CLTCL1-203ENST00000449918 PRKCZQ05513 592 aa20.98■□□□□ 0.95
CLTCL1-203ENST00000449918 FAM110CQ1W6H9 321 aa20.98■□□□□ 0.95
CLTCL1-203ENST00000449918 CERKLQ49MI3 558 aaPredicted RBP20.98■□□□□ 0.95
CLTCL1-203ENST00000449918 ASCC2Q9H1I8 757 aaPredicted RBP20.98■□□□□ 0.95
CLTCL1-203ENST00000449918 MCM9Q9NXL9 1143 aa20.98■□□□□ 0.95
CLTCL1-203ENST00000449918 FOCADQ5VW36 1801 aa20.98■□□□□ 0.95
CLTCL1-203ENST00000449918 TNPO2O14787 897 aaKnown RBP20.97■□□□□ 0.95
CLTCL1-203ENST00000449918 MYCP01106 439 aaPredicted RBP20.97■□□□□ 0.95
CLTCL1-203ENST00000449918 HOXA7P31268 230 aaPredicted RBP20.97■□□□□ 0.95
CLTCL1-203ENST00000449918 ADD2P35612 726 aa20.97■□□□□ 0.95
CLTCL1-203ENST00000449918 PLCD1P51178 756 aa20.97■□□□□ 0.95
CLTCL1-203ENST00000449918 IRX3P78415 501 aaPredicted RBP20.97■□□□□ 0.95
CLTCL1-203ENST00000449918 ZSCAN25Q6NSZ9 544 aa20.97■□□□□ 0.95
CLTCL1-203ENST00000449918 GPATCH3Q96I76 525 aa20.97■□□□□ 0.95
CLTCL1-203ENST00000449918 CABP5Q9NP86 173 aa20.97■□□□□ 0.95
CLTCL1-203ENST00000449918 ECHDC1Q9NTX5 307 aa20.97■□□□□ 0.95
CLTCL1-203ENST00000449918 PTPRFP10586 1907 aa20.96■□□□□ 0.95
CLTCL1-203ENST00000449918 ABCB5Q2M3G0 1257 aa20.96■□□□□ 0.95
CLTCL1-203ENST00000449918 SHROOM1Q2M3G4 852 aaPredicted RBP20.96■□□□□ 0.95
CLTCL1-203ENST00000449918 USP17L2Q6R6M4 530 aa20.96■□□□□ 0.95
CLTCL1-203ENST00000449918 LCORLQ8N3X6 602 aa20.96■□□□□ 0.95
CLTCL1-203ENST00000449918 SLAIN1Q8ND83 568 aa20.96■□□□□ 0.95
CLTCL1-203ENST00000449918 COA7Q96BR5 231 aa20.96■□□□□ 0.95
CLTCL1-203ENST00000449918 BIN2Q9UBW5 565 aaPredicted RBP20.96■□□□□ 0.95
CLTCL1-203ENST00000449918 SIPA1L1O43166 1804 aa20.96■□□□□ 0.95
CLTCL1-203ENST00000449918 CDK5RAP2Q96SN8 1893 aa20.96■□□□□ 0.95
CLTCL1-203ENST00000449918 RAB3GAP1Q15042 981 aa20.95■□□□□ 0.94
CLTCL1-203ENST00000449918 UBE3CQ15386 1083 aa20.95■□□□□ 0.94
CLTCL1-203ENST00000449918 ARMT1Q9H993 441 aa20.95■□□□□ 0.94
CLTCL1-203ENST00000449918 DCP1AQ9NPI6 582 aaPredicted RBP20.95■□□□□ 0.94
CLTCL1-203ENST00000449918 TAOK2Q9UL54 1235 aa20.95■□□□□ 0.94
CLTCL1-203ENST00000449918 GABRQQ9UN88 632 aa20.95■□□□□ 0.94
CLTCL1-203ENST00000449918 ZSWIM8A7E2V4 1837 aa20.94■□□□□ 0.94
CLTCL1-203ENST00000449918 FLT3LGP49771 235 aa20.94■□□□□ 0.94
CLTCL1-203ENST00000449918 UBXN2AP68543 259 aa20.94■□□□□ 0.94
CLTCL1-203ENST00000449918 SDR42E1Q8WUS8 393 aa20.94■□□□□ 0.94
CLTCL1-203ENST00000449918 DDRGK1Q96HY6 314 aa20.94■□□□□ 0.94
CLTCL1-203ENST00000449918 FEZ1Q99689 392 aa20.94■□□□□ 0.94
CLTCL1-203ENST00000449918 ATP8A2Q9NTI2 1148 aa20.94■□□□□ 0.94
CLTCL1-203ENST00000449918 ATAD5Q96QE3 1844 aa20.94■□□□□ 0.94
CLTCL1-203ENST00000449918 CENPFP49454 3210 aa20.94■□□□□ 0.94
CLTCL1-203ENST00000449918 MBD4O95243 580 aa20.93■□□□□ 0.94
CLTCL1-203ENST00000449918 SHMT1P34896 483 aa20.93■□□□□ 0.94
CLTCL1-203ENST00000449918 USP14P54578 494 aa20.93■□□□□ 0.94
CLTCL1-203ENST00000449918 RRP1P56182 461 aaKnown RBP20.93■□□□□ 0.94
CLTCL1-203ENST00000449918 GABPAQ06546 454 aa20.93■□□□□ 0.94
CLTCL1-203ENST00000449918 IRF5Q13568 498 aa20.93■□□□□ 0.94
CLTCL1-203ENST00000449918 PRPF38BQ5VTL8 546 aaKnown RBP20.93■□□□□ 0.94
CLTCL1-203ENST00000449918 EMILIN3Q9NT22 766 aa20.93■□□□□ 0.94
CLTCL1-203ENST00000449918 MYH1P12882 1939 aa20.92■□□□□ 0.94
CLTCL1-203ENST00000449918 KIAA0100Q14667 2235 aaKnown RBP20.92■□□□□ 0.94
CLTCL1-203ENST00000449918 ADCY3O60266 1144 aa20.92■□□□□ 0.94
CLTCL1-203ENST00000449918 AMOTL1Q8IY63 956 aa20.92■□□□□ 0.94
CLTCL1-203ENST00000449918 PXYLP1Q8TE99 480 aa20.92■□□□□ 0.94
CLTCL1-203ENST00000449918 GTF3C2Q8WUA4 911 aaPredicted RBP20.92■□□□□ 0.94
CLTCL1-203ENST00000449918 P2RX7Q99572 595 aaKnown RBP20.92■□□□□ 0.94
CLTCL1-203ENST00000449918 MORF4L1Q9UBU8 362 aa20.92■□□□□ 0.94
CLTCL1-203ENST00000449918 LOC285556D6RIA3 1793 aa20.92■□□□□ 0.94
CLTCL1-203ENST00000449918 HERVK_113P62684 666 aa20.91■□□□□ 0.94
CLTCL1-203ENST00000449918 MTFR1Q15390 333 aa20.91■□□□□ 0.94
CLTCL1-203ENST00000449918 SLFNL1Q499Z3 407 aa20.91■□□□□ 0.94
CLTCL1-203ENST00000449918 GPRC5AQ8NFJ5 357 aa20.91■□□□□ 0.94
CLTCL1-203ENST00000449918 NKX2-3Q8TAU0 364 aa20.91■□□□□ 0.94
CLTCL1-203ENST00000449918 KIAA1683Q9H0B3 1180 aa20.91■□□□□ 0.94
CLTCL1-203ENST00000449918 SWAP70Q9UH65 585 aa20.91■□□□□ 0.94
CLTCL1-203ENST00000449918 PCDHB15Q9Y5E8 787 aa20.91■□□□□ 0.94
CLTCL1-203ENST00000449918 TNRC18O15417 2968 aaPredicted RBP20.91■□□□□ 0.94
CLTCL1-203ENST00000449918 PDE4DIPQ5VU43 2346 aa20.9■□□□□ 0.94
CLTCL1-203ENST00000449918 PRKAB2O43741 272 aa20.9■□□□□ 0.94
CLTCL1-203ENST00000449918 CCL5P13501 91 aa20.9■□□□□ 0.94
CLTCL1-203ENST00000449918 C12orf42Q96LP6 360 aa20.9■□□□□ 0.94
CLTCL1-203ENST00000449918 RNF208Q9H0X6 261 aa20.9■□□□□ 0.94
CLTCL1-203ENST00000449918 USP17L15C9J2P7 530 aa20.89■□□□□ 0.93
CLTCL1-203ENST00000449918 USP17L13C9JLJ4 530 aa20.89■□□□□ 0.93
CLTCL1-203ENST00000449918 USP17L11C9JVI0 530 aa20.89■□□□□ 0.93
CLTCL1-203ENST00000449918 USP17L18D6R9N7 530 aa20.89■□□□□ 0.93
CLTCL1-203ENST00000449918 USP17L22D6RA61 530 aa20.89■□□□□ 0.93
CLTCL1-203ENST00000449918 USP17L17D6RBQ6 530 aa20.89■□□□□ 0.93
CLTCL1-203ENST00000449918 USP17L19D6RCP7 530 aa20.89■□□□□ 0.93
CLTCL1-203ENST00000449918 USP17L20D6RJB6 530 aa20.89■□□□□ 0.93
CLTCL1-203ENST00000449918 MPHOSPH10O00566 681 aaKnown RBP20.89■□□□□ 0.93
CLTCL1-203ENST00000449918 USP17L24Q0WX57 530 aa20.89■□□□□ 0.93
CLTCL1-203ENST00000449918 ZYXQ15942 572 aaKnown RBP20.89■□□□□ 0.93
CLTCL1-203ENST00000449918 SLC4A4Q9Y6R1 1079 aa20.89■□□□□ 0.93
CLTCL1-203ENST00000449918 RBBP6Q7Z6E9 1792 aaKnown RBP20.89■□□□□ 0.93
CLTCL1-203ENST00000449918 GJB1P08034 283 aa20.88■□□□□ 0.93
CLTCL1-203ENST00000449918 CYP2D6P10635 497 aa20.88■□□□□ 0.93
CLTCL1-203ENST00000449918 CCAR1Q8IX12 1150 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms