RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 WDR18Q9BV38 432 aa15.85■□□□□ 0.13
SEC22C-209ENST00000449617 CRNKL1Q9BZJ0 848 aaKnown RBP15.85■□□□□ 0.13
SEC22C-209ENST00000449617 DCTPP1Q9H773 170 aa15.85■□□□□ 0.13
SEC22C-209ENST00000449617 POTEFA5A3E0 1075 aa15.84■□□□□ 0.13
SEC22C-209ENST00000449617 OSBPP22059 807 aa15.84■□□□□ 0.13
SEC22C-209ENST00000449617 ADD2P35612 726 aa15.84■□□□□ 0.13
SEC22C-209ENST00000449617 PRMT2P55345 433 aa15.84■□□□□ 0.13
SEC22C-209ENST00000449617 SLFNL1Q499Z3 407 aa15.84■□□□□ 0.13
SEC22C-209ENST00000449617 LCORLQ8N3X6 602 aa15.84■□□□□ 0.13
SEC22C-209ENST00000449617 ZNF333Q96JL9 665 aa15.84■□□□□ 0.13
SEC22C-209ENST00000449617 EHD4Q9H223 541 aa15.84■□□□□ 0.13
SEC22C-209ENST00000449617 GINM1Q9NU53 330 aa15.84■□□□□ 0.13
SEC22C-209ENST00000449617 SRRDQ9UH36 339 aa15.84■□□□□ 0.13
SEC22C-209ENST00000449617 SERPINB13Q9UIV8 391 aa15.84■□□□□ 0.13
SEC22C-209ENST00000449617 PNMA3Q9UL41 463 aa15.84■□□□□ 0.13
SEC22C-209ENST00000449617 GH2P01242 217 aa15.83■□□□□ 0.12
SEC22C-209ENST00000449617 FCGRTP55899 365 aa15.83■□□□□ 0.12
SEC22C-209ENST00000449617 BACE1P56817 501 aa15.83■□□□□ 0.12
SEC22C-209ENST00000449617 SH3D19Q5HYK7 790 aa15.83■□□□□ 0.12
SEC22C-209ENST00000449617 TTC6Q86TZ1 520 aa15.83■□□□□ 0.12
SEC22C-209ENST00000449617 SH3TC2Q8TF17 1288 aa15.83■□□□□ 0.12
SEC22C-209ENST00000449617 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.83■□□□□ 0.12
SEC22C-209ENST00000449617 PCDHB15Q9Y5E8 787 aa15.83■□□□□ 0.12
SEC22C-209ENST00000449617 PLCD1P51178 756 aa15.82■□□□□ 0.12
SEC22C-209ENST00000449617 TATDN1Q6P1N9 297 aa15.82■□□□□ 0.12
SEC22C-209ENST00000449617 NBPF11Q86T75 865 aa15.82■□□□□ 0.12
SEC22C-209ENST00000449617 SDR42E1Q8WUS8 393 aa15.82■□□□□ 0.12
SEC22C-209ENST00000449617 ARMT1Q9H993 441 aa15.82■□□□□ 0.12
SEC22C-209ENST00000449617 ECHDC1Q9NTX5 307 aa15.82■□□□□ 0.12
SEC22C-209ENST00000449617 MCM9Q9NXL9 1143 aa15.82■□□□□ 0.12
SEC22C-209ENST00000449617 BAZ2AQ9UIF9 1905 aaKnown RBP15.82■□□□□ 0.12
SEC22C-209ENST00000449617 MYPNQ86TC9 1320 aa15.82■□□□□ 0.12
SEC22C-209ENST00000449617 MBD4O95243 580 aa15.81■□□□□ 0.12
SEC22C-209ENST00000449617 MYCP01106 439 aaPredicted RBP15.81■□□□□ 0.12
SEC22C-209ENST00000449617 CHGBP05060 677 aa15.81■□□□□ 0.12
SEC22C-209ENST00000449617 POLR3DP05423 398 aaPredicted RBP15.81■□□□□ 0.12
SEC22C-209ENST00000449617 HOXD10P28358 340 aa15.81■□□□□ 0.12
SEC22C-209ENST00000449617 EVX2Q03828 476 aa15.81■□□□□ 0.12
SEC22C-209ENST00000449617 PABPC4Q13310 644 aaKnown RBP eCLIP15.81■□□□□ 0.12
SEC22C-209ENST00000449617 TSHZ3Q63HK5 1081 aa15.81■□□□□ 0.12
SEC22C-209ENST00000449617 ANKRD13CQ8N6S4 541 aa15.81■□□□□ 0.12
SEC22C-209ENST00000449617 ASCC2Q9H1I8 757 aaPredicted RBP15.81■□□□□ 0.12
SEC22C-209ENST00000449617 TMOD4Q9NZQ9 345 aa15.81■□□□□ 0.12
SEC22C-209ENST00000449617 DOCK3Q8IZD9 2030 aa15.81■□□□□ 0.12
SEC22C-209ENST00000449617 USP17L10C9JJH3 530 aa15.8■□□□□ 0.12
SEC22C-209ENST00000449617 SHMT1P34896 483 aa15.8■□□□□ 0.12
SEC22C-209ENST00000449617 PRKCZQ05513 592 aa15.8■□□□□ 0.12
SEC22C-209ENST00000449617 CERKLQ49MI3 558 aaPredicted RBP15.8■□□□□ 0.12
SEC22C-209ENST00000449617 RAET1EQ8TD07 263 aa15.8■□□□□ 0.12
SEC22C-209ENST00000449617 GPATCH3Q96I76 525 aa15.8■□□□□ 0.12
SEC22C-209ENST00000449617 DCP1AQ9NPI6 582 aaPredicted RBP15.8■□□□□ 0.12
SEC22C-209ENST00000449617 MYH8P13535 1937 aa15.79■□□□□ 0.12
SEC22C-209ENST00000449617 C19orf81C9J6K1 198 aa15.79■□□□□ 0.12
SEC22C-209ENST00000449617 PRKAB2O43741 272 aa15.79■□□□□ 0.12
SEC22C-209ENST00000449617 CYP2D6P10635 497 aa15.79■□□□□ 0.12
SEC22C-209ENST00000449617 GABPAQ06546 454 aa15.79■□□□□ 0.12
SEC22C-209ENST00000449617 UBE3CQ15386 1083 aa15.79■□□□□ 0.12
SEC22C-209ENST00000449617 FAM110CQ1W6H9 321 aa15.79■□□□□ 0.12
SEC22C-209ENST00000449617 ABCB5Q2M3G0 1257 aa15.79■□□□□ 0.12
SEC22C-209ENST00000449617 CRBNQ96SW2 442 aa15.79■□□□□ 0.12
SEC22C-209ENST00000449617 TMEM106CQ9BVX2 250 aa15.79■□□□□ 0.12
SEC22C-209ENST00000449617 EN2P19622 333 aaPredicted RBP15.78■□□□□ 0.12
SEC22C-209ENST00000449617 GCLCP48506 637 aaPredicted RBP15.78■□□□□ 0.12
SEC22C-209ENST00000449617 IRX3P78415 501 aaPredicted RBP15.78■□□□□ 0.12
SEC22C-209ENST00000449617 RAB3GAP1Q15042 981 aa15.78■□□□□ 0.12
SEC22C-209ENST00000449617 ZSCAN25Q6NSZ9 544 aa15.78■□□□□ 0.12
SEC22C-209ENST00000449617 GABRQQ9UN88 632 aa15.78■□□□□ 0.12
SEC22C-209ENST00000449617 TNPO2O14787 897 aaKnown RBP15.77■□□□□ 0.12
SEC22C-209ENST00000449617 HOXA7P31268 230 aaPredicted RBP15.77■□□□□ 0.12
SEC22C-209ENST00000449617 GRK4P32298 578 aa15.77■□□□□ 0.12
SEC22C-209ENST00000449617 FEZ1Q99689 392 aa15.77■□□□□ 0.12
SEC22C-209ENST00000449617 EMILIN3Q9NT22 766 aa15.77■□□□□ 0.12
SEC22C-209ENST00000449617 FLT3LGP49771 235 aa15.77■□□□□ 0.11
SEC22C-209ENST00000449617 ZYXQ15942 572 aaKnown RBP15.77■□□□□ 0.11
SEC22C-209ENST00000449617 USP17L2Q6R6M4 530 aa15.77■□□□□ 0.11
SEC22C-209ENST00000449617 SLC44A5Q8NCS7 719 aa15.77■□□□□ 0.11
SEC22C-209ENST00000449617 PUS7LQ9H0K6 701 aaKnown RBP15.77■□□□□ 0.11
SEC22C-209ENST00000449617 CABP5Q9NP86 173 aa15.77■□□□□ 0.11
SEC22C-209ENST00000449617 ATP8A2Q9NTI2 1148 aa15.77■□□□□ 0.11
SEC22C-209ENST00000449617 GUCY1A2P33402 732 aa15.76■□□□□ 0.11
SEC22C-209ENST00000449617 HERVK_113P62684 666 aa15.76■□□□□ 0.11
SEC22C-209ENST00000449617 MTFR1Q15390 333 aa15.76■□□□□ 0.11
SEC22C-209ENST00000449617 KBTBD3Q8NAB2 608 aa15.76■□□□□ 0.11
SEC22C-209ENST00000449617 ACER1Q8TDN7 264 aa15.76■□□□□ 0.11
SEC22C-209ENST00000449617 OTUD7AQ8TE49 926 aaPredicted RBP15.76■□□□□ 0.11
SEC22C-209ENST00000449617 DYNLL2Q96FJ2 89 aa15.76■□□□□ 0.11
SEC22C-209ENST00000449617 C12orf42Q96LP6 360 aa15.76■□□□□ 0.11
SEC22C-209ENST00000449617 P2RX7Q99572 595 aaKnown RBP15.76■□□□□ 0.11
SEC22C-209ENST00000449617 CYP2D7A0A087X1C5 515 aa15.75■□□□□ 0.11
SEC22C-209ENST00000449617 MPHOSPH10O00566 681 aaKnown RBP15.75■□□□□ 0.11
SEC22C-209ENST00000449617 PEX10O60683 326 aa15.75■□□□□ 0.11
SEC22C-209ENST00000449617 SEPT2Q15019 361 aa15.75■□□□□ 0.11
SEC22C-209ENST00000449617 SLAIN1Q8ND83 568 aa15.75■□□□□ 0.11
SEC22C-209ENST00000449617 COA7Q96BR5 231 aa15.75■□□□□ 0.11
SEC22C-209ENST00000449617 KIAA1683Q9H0B3 1180 aa15.75■□□□□ 0.11
SEC22C-209ENST00000449617 MORF4L1Q9UBU8 362 aa15.75■□□□□ 0.11
SEC22C-209ENST00000449617 BIN2Q9UBW5 565 aaPredicted RBP15.75■□□□□ 0.11
SEC22C-209ENST00000449617 SWAP70Q9UH65 585 aa15.75■□□□□ 0.11
SEC22C-209ENST00000449617 SLC4A4Q9Y6R1 1079 aa15.75■□□□□ 0.11
SEC22C-209ENST00000449617 TTC41PQ6P2S7 1318 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms