RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 DSCC1Q9BVC3 393 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 ZNF341Q9BYN7 854 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 NACAP1Q9BZK3 213 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 ANO2Q9NQ90 1003 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 ZNF112Q9UJU3 913 aa11.7□□□□□ -0.54
CCDC171-203ENST00000449575 TBC1D12O60347 775 aa11.69□□□□□ -0.54
CCDC171-203ENST00000449575 MFAP1P55081 439 aaKnown RBP11.69□□□□□ -0.54
CCDC171-203ENST00000449575 DCAF15Q66K64 600 aa11.69□□□□□ -0.54
CCDC171-203ENST00000449575 FOXP4Q8IVH2 680 aaPredicted RBP11.69□□□□□ -0.54
CCDC171-203ENST00000449575 EHD4Q9H223 541 aa11.69□□□□□ -0.54
CCDC171-203ENST00000449575 ELP3Q9H9T3 547 aa11.69□□□□□ -0.54
CCDC171-203ENST00000449575 SNCAIPQ9Y6H5 919 aa11.69□□□□□ -0.54
CCDC171-203ENST00000449575 GREB1LQ9C091 1923 aaPredicted RBP11.69□□□□□ -0.54
CCDC171-203ENST00000449575 CDK8P49336 464 aa11.69□□□□□ -0.54
CCDC171-203ENST00000449575 MKRN3Q13064 507 aaKnown RBP11.69□□□□□ -0.54
CCDC171-203ENST00000449575 GRM1Q13255 1194 aa11.69□□□□□ -0.54
CCDC171-203ENST00000449575 COL9A3Q14050 684 aaPredicted RBP11.69□□□□□ -0.54
CCDC171-203ENST00000449575 CYP4F22Q6NT55 531 aa11.69□□□□□ -0.54
CCDC171-203ENST00000449575 ARMC9Q7Z3E5 817 aa11.69□□□□□ -0.54
CCDC171-203ENST00000449575 TBC1D10CQ8IV04 446 aa11.69□□□□□ -0.54
CCDC171-203ENST00000449575 MAP4K1Q92918 833 aa11.69□□□□□ -0.54
CCDC171-203ENST00000449575 ZIC5Q96T25 663 aa11.69□□□□□ -0.54
CCDC171-203ENST00000449575 HERC5Q9UII4 1024 aaKnown RBP11.69□□□□□ -0.54
CCDC171-203ENST00000449575 GJA5P36382 358 aa11.68□□□□□ -0.54
CCDC171-203ENST00000449575 IREB2P48200 963 aaKnown RBP11.68□□□□□ -0.54
CCDC171-203ENST00000449575 MAP3K9P80192 1104 aa11.68□□□□□ -0.54
CCDC171-203ENST00000449575 TATDN1Q6P1N9 297 aa11.68□□□□□ -0.54
CCDC171-203ENST00000449575 C16orf86Q6ZW13 317 aa11.68□□□□□ -0.54
CCDC171-203ENST00000449575 CLEC10AQ8IUN9 316 aa11.68□□□□□ -0.54
CCDC171-203ENST00000449575 RBM8AQ9Y5S9 174 aaKnown RBP11.68□□□□□ -0.54
CCDC171-203ENST00000449575 MYH4Q9Y623 1939 aa11.68□□□□□ -0.54
CCDC171-203ENST00000449575 ROBO3Q96MS0 1386 aa11.68□□□□□ -0.54
CCDC171-203ENST00000449575 TPM2P07951 284 aa11.68□□□□□ -0.54
CCDC171-203ENST00000449575 CYP21A2P08686 494 aa11.68□□□□□ -0.54
CCDC171-203ENST00000449575 BRD2P25440 801 aaKnown RBP11.67□□□□□ -0.54
CCDC171-203ENST00000449575 CAP2P40123 477 aa11.67□□□□□ -0.54
CCDC171-203ENST00000449575 FKBP1BP68106 108 aa11.67□□□□□ -0.54
CCDC171-203ENST00000449575 CASC1Q6TDU7 716 aa11.67□□□□□ -0.54
CCDC171-203ENST00000449575 ANKRD13AQ8IZ07 590 aa11.67□□□□□ -0.54
CCDC171-203ENST00000449575 TRIM34Q9BYJ4 488 aa11.67□□□□□ -0.54
CCDC171-203ENST00000449575 ISY1Q9ULR0 285 aaKnown RBP11.67□□□□□ -0.54
CCDC171-203ENST00000449575 FSD2A1L4K1 749 aa11.67□□□□□ -0.54
CCDC171-203ENST00000449575 AKR1B1P15121 316 aa11.67□□□□□ -0.54
CCDC171-203ENST00000449575 RASA1P20936 1047 aa11.67□□□□□ -0.54
CCDC171-203ENST00000449575 GUCY1A2P33402 732 aa11.67□□□□□ -0.54
CCDC171-203ENST00000449575 PAXIP1Q6ZW49 1069 aaPredicted RBP11.67□□□□□ -0.54
CCDC171-203ENST00000449575 HOOK2Q96ED9 719 aa11.67□□□□□ -0.54
CCDC171-203ENST00000449575 ZMYM6O95789 1325 aa11.67□□□□□ -0.54
CCDC171-203ENST00000449575 FAM155AB1AL88 458 aaPredicted RBP11.66□□□□□ -0.54
CCDC171-203ENST00000449575 GH2P01242 217 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 ZNF157P51786 506 aaPredicted RBP11.66□□□□□ -0.54
CCDC171-203ENST00000449575 DEFB115Q30KQ5 88 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 CERKLQ49MI3 558 aaPredicted RBP11.66□□□□□ -0.54
CCDC171-203ENST00000449575 RGMBQ6NW40 437 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 AMOTL1Q8IY63 956 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 ANAPC4Q9UJX5 808 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 NEDD4P46934 1319 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 RASSF10A6NK89 507 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 CTNND1O60716 968 aaKnown RBP11.66□□□□□ -0.54
CCDC171-203ENST00000449575 XRCC6P12956 609 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC171-203ENST00000449575 FGD1P98174 961 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 DGKZQ13574 1117 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 FAM47AQ5JRC9 791 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 KIAA1211Q6ZU35 1233 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 STOX1Q6ZVD7 989 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 RASAL3Q86YV0 1011 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 SCYL3Q8IZE3 742 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 OTUD5Q96G74 571 aa11.66□□□□□ -0.54
CCDC171-203ENST00000449575 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC171-203ENST00000449575 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC171-203ENST00000449575 ZNF213O14771 459 aa11.65□□□□□ -0.54
CCDC171-203ENST00000449575 AOC2O75106 756 aa11.65□□□□□ -0.54
CCDC171-203ENST00000449575 MRE11P49959 708 aa11.65□□□□□ -0.54
CCDC171-203ENST00000449575 NECTIN1Q15223 517 aa11.65□□□□□ -0.54
CCDC171-203ENST00000449575 OPTNQ96CV9 577 aa11.65□□□□□ -0.54
CCDC171-203ENST00000449575 SLC10A4Q96EP9 437 aa11.65□□□□□ -0.54
CCDC171-203ENST00000449575 PDCL3Q9H2J4 239 aa11.65□□□□□ -0.54
CCDC171-203ENST00000449575 CSADQ9Y600 493 aa11.65□□□□□ -0.54
CCDC171-203ENST00000449575 MPHOSPH10O00566 681 aaKnown RBP11.65□□□□□ -0.54
CCDC171-203ENST00000449575 PTPRAP18433 802 aa11.65□□□□□ -0.54
CCDC171-203ENST00000449575 VEGFBP49765 207 aa11.65□□□□□ -0.54
CCDC171-203ENST00000449575 SEPT2Q15019 361 aa11.65□□□□□ -0.54
CCDC171-203ENST00000449575 RRP12Q5JTH9 1297 aaKnown RBP11.65□□□□□ -0.54
CCDC171-203ENST00000449575 MKNK2Q9HBH9 465 aa11.65□□□□□ -0.54
CCDC171-203ENST00000449575 ZBTB21Q9ULJ3 1066 aa11.65□□□□□ -0.54
CCDC171-203ENST00000449575 IRF6O14896 467 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 NMT2O60551 498 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 ABCB5Q2M3G0 1257 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 NOL9Q5SY16 702 aaKnown RBP11.64□□□□□ -0.55
CCDC171-203ENST00000449575 RASEFQ8IZ41 740 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 CAPNS2Q96L46 248 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 SWAP70Q9UH65 585 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 U3KPZ7 1027 aaPredicted RBP11.64□□□□□ -0.55
CCDC171-203ENST00000449575 SLC27A2O14975 620 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 FGRP09769 529 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 RAB3GAP1Q15042 981 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 IMMTQ16891 758 aaKnown RBP11.64□□□□□ -0.55
CCDC171-203ENST00000449575 AKNAD1Q5T1N1 836 aa11.64□□□□□ -0.55
CCDC171-203ENST00000449575 CREB3L3Q68CJ9 461 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms