RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 GCLCP48506 637 aaPredicted RBP16.66■□□□□ 0.26
TOM1-211ENST00000449508 FLT3LGP49771 235 aa16.66■□□□□ 0.26
TOM1-211ENST00000449508 BACE1P56817 501 aa16.66■□□□□ 0.26
TOM1-211ENST00000449508 UBXN2AP68543 259 aa16.66■□□□□ 0.26
TOM1-211ENST00000449508 MTMR2Q13614 643 aa16.66■□□□□ 0.26
TOM1-211ENST00000449508 ASCC2Q9H1I8 757 aaPredicted RBP16.66■□□□□ 0.26
TOM1-211ENST00000449508 GINM1Q9NU53 330 aa16.66■□□□□ 0.26
TOM1-211ENST00000449508 TMOD4Q9NZQ9 345 aa16.66■□□□□ 0.26
TOM1-211ENST00000449508 USP17L10C9JJH3 530 aa16.65■□□□□ 0.26
TOM1-211ENST00000449508 ADCY3O60266 1144 aa16.65■□□□□ 0.26
TOM1-211ENST00000449508 CCL5P13501 91 aa16.65■□□□□ 0.26
TOM1-211ENST00000449508 FAM110CQ1W6H9 321 aa16.65■□□□□ 0.26
TOM1-211ENST00000449508 SHROOM1Q2M3G4 852 aaPredicted RBP16.65■□□□□ 0.26
TOM1-211ENST00000449508 SLC9C2Q5TAH2 1124 aa16.65■□□□□ 0.26
TOM1-211ENST00000449508 SLAIN1Q8ND83 568 aa16.65■□□□□ 0.26
TOM1-211ENST00000449508 COA7Q96BR5 231 aa16.65■□□□□ 0.26
TOM1-211ENST00000449508 BRCA2P51587 3418 aa16.64■□□□□ 0.25
TOM1-211ENST00000449508 MAGEB6P1A0A0J9YX57 407 aa16.64■□□□□ 0.25
TOM1-211ENST00000449508 C19orf81C9J6K1 198 aa16.64■□□□□ 0.25
TOM1-211ENST00000449508 TTC6Q86TZ1 520 aa16.64■□□□□ 0.25
TOM1-211ENST00000449508 NKX2-3Q8TAU0 364 aa16.64■□□□□ 0.25
TOM1-211ENST00000449508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.64■□□□□ 0.25
TOM1-211ENST00000449508 DNAJC2Q99543 621 aaKnown RBP16.64■□□□□ 0.25
TOM1-211ENST00000449508 RNF208Q9H0X6 261 aa16.64■□□□□ 0.25
TOM1-211ENST00000449508 TAOK2Q9UL54 1235 aa16.64■□□□□ 0.25
TOM1-211ENST00000449508 ZBTB21Q9ULJ3 1066 aa16.64■□□□□ 0.25
TOM1-211ENST00000449508 GOLIM4O00461 696 aa16.63■□□□□ 0.25
TOM1-211ENST00000449508 ELNP15502 786 aa16.63■□□□□ 0.25
TOM1-211ENST00000449508 IRX3P78415 501 aaPredicted RBP16.63■□□□□ 0.25
TOM1-211ENST00000449508 PXYLP1Q8TE99 480 aa16.63■□□□□ 0.25
TOM1-211ENST00000449508 P2RX7Q99572 595 aaKnown RBP16.63■□□□□ 0.25
TOM1-211ENST00000449508 RIOK1Q9BRS2 568 aaKnown RBP16.63■□□□□ 0.25
TOM1-211ENST00000449508 SERPINB13Q9UIV8 391 aa16.63■□□□□ 0.25
TOM1-211ENST00000449508 MKI67P46013 3256 aaKnown RBP16.62■□□□□ 0.25
TOM1-211ENST00000449508 GH2P01242 217 aa16.62■□□□□ 0.25
TOM1-211ENST00000449508 GJB1P08034 283 aa16.62■□□□□ 0.25
TOM1-211ENST00000449508 PDE6AP16499 860 aa16.62■□□□□ 0.25
TOM1-211ENST00000449508 HOXA7P31268 230 aaPredicted RBP16.62■□□□□ 0.25
TOM1-211ENST00000449508 IRF5Q13568 498 aa16.62■□□□□ 0.25
TOM1-211ENST00000449508 PDE3AQ14432 1141 aa16.62■□□□□ 0.25
TOM1-211ENST00000449508 C20orf194Q5TEA3 1177 aa16.62■□□□□ 0.25
TOM1-211ENST00000449508 TATDN1Q6P1N9 297 aa16.62■□□□□ 0.25
TOM1-211ENST00000449508 GCC1Q96CN9 775 aa16.62■□□□□ 0.25
TOM1-211ENST00000449508 EHD4Q9H223 541 aa16.62■□□□□ 0.25
TOM1-211ENST00000449508 ZNF532Q9HCE3 1301 aa16.62■□□□□ 0.25
TOM1-211ENST00000449508 POLR3DP05423 398 aaPredicted RBP16.61■□□□□ 0.25
TOM1-211ENST00000449508 GJA8P48165 433 aa16.61■□□□□ 0.25
TOM1-211ENST00000449508 PLCD1P51178 756 aa16.61■□□□□ 0.25
TOM1-211ENST00000449508 CERKLQ49MI3 558 aaPredicted RBP16.61■□□□□ 0.25
TOM1-211ENST00000449508 USP17L2Q6R6M4 530 aa16.61■□□□□ 0.25
TOM1-211ENST00000449508 SHISA4Q96DD7 197 aa16.61■□□□□ 0.25
TOM1-211ENST00000449508 EDC3Q96F86 508 aaKnown RBP16.61■□□□□ 0.25
TOM1-211ENST00000449508 CRNKL1Q9BZJ0 848 aaKnown RBP16.61■□□□□ 0.25
TOM1-211ENST00000449508 UNC93B1Q9H1C4 597 aa16.61■□□□□ 0.25
TOM1-211ENST00000449508 BOLA2Q9H3K6 86 aa16.61■□□□□ 0.25
TOM1-211ENST00000449508 CEP290O15078 2479 aa16.6■□□□□ 0.25
TOM1-211ENST00000449508 INHAP05111 366 aa16.6■□□□□ 0.25
TOM1-211ENST00000449508 RAB3GAP1Q15042 981 aa16.6■□□□□ 0.25
TOM1-211ENST00000449508 CABP5Q9NP86 173 aa16.6■□□□□ 0.25
TOM1-211ENST00000449508 EMILIN3Q9NT22 766 aa16.6■□□□□ 0.25
TOM1-211ENST00000449508 PAG1Q9NWQ8 432 aa16.6■□□□□ 0.25
TOM1-211ENST00000449508 ATP5JP18859 108 aa16.59■□□□□ 0.25
TOM1-211ENST00000449508 HERVK_113P62684 666 aa16.59■□□□□ 0.25
TOM1-211ENST00000449508 ABCB5Q2M3G0 1257 aa16.59■□□□□ 0.25
TOM1-211ENST00000449508 U2AF1L4Q8WU68 220 aaKnown RBP16.59■□□□□ 0.25
TOM1-211ENST00000449508 FEZ1Q99689 392 aa16.59■□□□□ 0.25
TOM1-211ENST00000449508 MCM9Q9NXL9 1143 aa16.59■□□□□ 0.25
TOM1-211ENST00000449508 MORF4L1Q9UBU8 362 aa16.59■□□□□ 0.25
TOM1-211ENST00000449508 TCRBV5S4A2TA0A5A2 114 aa16.58■□□□□ 0.24
TOM1-211ENST00000449508 PEX10O60683 326 aa16.58■□□□□ 0.24
TOM1-211ENST00000449508 SGPL1O95470 568 aa16.58■□□□□ 0.24
TOM1-211ENST00000449508 SHMT1P34896 483 aa16.58■□□□□ 0.24
TOM1-211ENST00000449508 ZYXQ15942 572 aaKnown RBP16.58■□□□□ 0.24
TOM1-211ENST00000449508 GPRC5AQ8NFJ5 357 aa16.58■□□□□ 0.24
TOM1-211ENST00000449508 SDR42E1Q8WUS8 393 aa16.58■□□□□ 0.24
TOM1-211ENST00000449508 LRRCC1Q9C099 1032 aa16.58■□□□□ 0.24
TOM1-211ENST00000449508 GJD2Q9UKL4 321 aa16.58■□□□□ 0.24
TOM1-211ENST00000449508 NAV1Q8NEY1 1877 aa16.57■□□□□ 0.24
TOM1-211ENST00000449508 TFRCP02786 760 aaKnown RBP16.57■□□□□ 0.24
TOM1-211ENST00000449508 CCAR1Q8IX12 1150 aaKnown RBP16.57■□□□□ 0.24
TOM1-211ENST00000449508 LCORLQ8N3X6 602 aa16.57■□□□□ 0.24
TOM1-211ENST00000449508 DPF3Q92784 378 aa16.57■□□□□ 0.24
TOM1-211ENST00000449508 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.57■□□□□ 0.24
TOM1-211ENST00000449508 ARMT1Q9H993 441 aa16.57■□□□□ 0.24
TOM1-211ENST00000449508 TXNRD2Q9NNW7 524 aa16.57■□□□□ 0.24
TOM1-211ENST00000449508 DCP1AQ9NPI6 582 aaPredicted RBP16.57■□□□□ 0.24
TOM1-211ENST00000449508 RBPJLQ9UBG7 517 aa16.57■□□□□ 0.24
TOM1-211ENST00000449508 SMARCA5O60264 1052 aaPredicted RBP16.56■□□□□ 0.24
TOM1-211ENST00000449508 ADD2P35612 726 aa16.56■□□□□ 0.24
TOM1-211ENST00000449508 USP14P54578 494 aa16.56■□□□□ 0.24
TOM1-211ENST00000449508 Q3C1V9 767 aa16.56■□□□□ 0.24
TOM1-211ENST00000449508 SLFNL1Q499Z3 407 aa16.56■□□□□ 0.24
TOM1-211ENST00000449508 C12orf42Q96LP6 360 aa16.56■□□□□ 0.24
TOM1-211ENST00000449508 DEFB118Q96PH6 123 aa16.56■□□□□ 0.24
TOM1-211ENST00000449508 HAUS7Q99871 368 aa16.56■□□□□ 0.24
TOM1-211ENST00000449508 PAGR1Q9BTK6 254 aa16.56■□□□□ 0.24
TOM1-211ENST00000449508 USP17L15C9J2P7 530 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 USP17L13C9JLJ4 530 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 USP17L11C9JVI0 530 aa16.55■□□□□ 0.24
TOM1-211ENST00000449508 USP17L18D6R9N7 530 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms