RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 YME1L1Q96TA2 773 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 SWAP70Q9UH65 585 aa6.47□□□□□ -1.37
CDC42BPA-209ENST00000448940 IGBP1P78318 339 aa6.46□□□□□ -1.37
CDC42BPA-209ENST00000448940 ZMYND8Q9ULU4 1186 aaPredicted RBP6.46□□□□□ -1.37
CDC42BPA-209ENST00000448940 TBC1D9Q6ZT07 1266 aa6.46□□□□□ -1.37
CDC42BPA-209ENST00000448940 CHD1LQ86WJ1 897 aa6.46□□□□□ -1.37
CDC42BPA-209ENST00000448940 ARMT1Q9H993 441 aa6.46□□□□□ -1.37
CDC42BPA-209ENST00000448940 FNDC3AQ9Y2H6 1198 aaKnown RBP6.46□□□□□ -1.37
CDC42BPA-209ENST00000448940 USP17L10C9JJH3 530 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 SORBS3O60504 671 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 CALM1P0DP23 149 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 CALM2P0DP24 149 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 CALM3P0DP25 149 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 PDCP20941 246 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 CACNB3P54284 484 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 FKBP1BP68106 108 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 KIF23Q02241 960 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 ANO1Q5XXA6 986 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 EEPD1Q7L9B9 569 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 PSMD1Q99460 953 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 RGS17Q9UGC6 210 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 SUGT1Q9Y2Z0 365 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 PPP2R3BQ9Y5P8 575 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 ATP10DQ9P241 1426 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 OFD1O75665 1012 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 DDR1Q08345 913 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 ERMNQ8TAM6 284 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 KANSL2Q9H9L4 492 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 RBM28Q9NW13 759 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZC3H4Q9UPT8 1303 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 C6orf222P0C671 652 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 INTS5Q6P9B9 1019 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 NLRX1Q86UT6 975 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 JMYQ8N9B5 988 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 KLRG1Q96E93 195 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 RNPC3Q96LT9 517 aaKnown RBP6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 MYPNQ86TC9 1320 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 CDHR2Q9BYE9 1310 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 FARP2O94887 1054 aaPredicted RBP6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 NAPAP54920 295 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 PTF1AQ7RTS3 328 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 ERO1BQ86YB8 467 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZNF34Q8IZ26 560 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 GLT8D2Q9H1C3 349 aa6.46□□□□□ -1.38
CDC42BPA-209ENST00000448940 DEPDC5O75140 1603 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 DKC1O60832 514 aaKnown RBP eCLIP6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 DIXDC1Q155Q3 683 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 RPUSD2Q8IZ73 545 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 KDM5AP29375 1690 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 GDF11O95390 407 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 MCMDC2Q4G0Z9 681 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 MCF2L2Q86YR7 1114 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 C7orf31Q8N865 590 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 UBA5Q9GZZ9 404 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 TMOD1P28289 359 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 PSMC4P43686 418 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 MICU3Q86XE3 530 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 JAKMIP1Q96N16 626 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 TAF1DQ9H5J8 278 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 ROBO1Q9Y6N7 1651 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 RGL2O15211 777 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 FCER1AP12319 257 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 MAPK8IP2Q13387 824 aaPredicted RBP6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 APPBP2Q92624 585 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 TMEM131LA2VDJ0 1609 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 PRDM1O75626 825 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 ATXN8OSP0DMR3 200 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 SPATA32Q96LK8 384 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 CPA4Q9UI42 421 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 PCDHB9Q9Y5E1 797 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 KIAA0100Q14667 2235 aaKnown RBP6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 MAP3K13O43283 966 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 CFBP00751 764 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 MCM5P33992 734 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 ZAP70P43403 619 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 SLFN13Q68D06 897 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 HEATR3Q7Z4Q2 680 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 AKT1S1Q96B36 256 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 MAP7D2Q96T17 732 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 ISCA1Q9BUE6 129 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 TRIM35Q9UPQ4 493 aa6.45□□□□□ -1.38
CDC42BPA-209ENST00000448940 PHKA1P46020 1223 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 STK3Q13188 491 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 LRRC24Q50LG9 513 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP37Q86T82 979 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 ANKRD44Q8N8A2 993 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 BICD2Q8TD16 824 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 MMP19Q99542 508 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 BCL9LQ86UU0 1499 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 TRPM1Q7Z4N2 1603 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 DENND3A2RUS2 1198 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP17L12C9JPN9 530 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP17L21D6R901 530 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 USP17L2Q6R6M4 530 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 GPRC5DQ9NZD1 345 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 MRPL11Q9Y3B7 192 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 MED1Q15648 1581 aaPredicted RBP6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 NFX1Q12986 1120 aaKnown RBP6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 DPH6Q7L8W6 267 aa6.44□□□□□ -1.38
CDC42BPA-209ENST00000448940 SDF4Q9BRK5 362 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms