RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 C20orf194Q5TEA3 1177 aa9.17□□□□□ -0.94
LPP-208ENST00000448637 NOP9Q86U38 636 aaKnown RBP9.17□□□□□ -0.94
LPP-208ENST00000448637 PDZD8Q8NEN9 1154 aa9.17□□□□□ -0.94
LPP-208ENST00000448637 ANAPC5Q9UJX4 755 aa9.17□□□□□ -0.94
LPP-208ENST00000448637 CCPG1Q9ULG6 757 aa9.17□□□□□ -0.94
LPP-208ENST00000448637 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.17□□□□□ -0.94
LPP-208ENST00000448637 RAD50Q92878 1312 aa9.17□□□□□ -0.94
LPP-208ENST00000448637 VWA3AA6NCI4 1184 aa9.17□□□□□ -0.94
LPP-208ENST00000448637 PPFIA4O75335 1185 aa9.17□□□□□ -0.94
LPP-208ENST00000448637 TBC1D8O95759 1140 aa9.17□□□□□ -0.94
LPP-208ENST00000448637 C8orf34Q49A92 452 aa9.17□□□□□ -0.94
LPP-208ENST00000448637 SYT10Q6XYQ8 523 aa9.17□□□□□ -0.94
LPP-208ENST00000448637 GRK7Q8WTQ7 553 aa9.17□□□□□ -0.94
LPP-208ENST00000448637 RAB17Q9H0T7 212 aa9.17□□□□□ -0.94
LPP-208ENST00000448637 DDX21Q9NR30 783 aaKnown RBP eCLIP9.17□□□□□ -0.94
LPP-208ENST00000448637 EMILIN1Q9Y6C2 1016 aa9.17□□□□□ -0.94
LPP-208ENST00000448637 HNRNPCL2B2RXH8 293 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 HNRNPCL1O60812 293 aaKnown RBP9.16□□□□□ -0.94
LPP-208ENST00000448637 NCAPH2Q6IBW4 605 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 RAB44Q7Z6P3 723 aaPredicted RBP9.16□□□□□ -0.94
LPP-208ENST00000448637 CTAGE3PQ8IX95 158 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 TRIML1Q8N9V2 468 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 SKA2Q8WVK7 121 aaPredicted RBP9.16□□□□□ -0.94
LPP-208ENST00000448637 SCYL1Q96KG9 808 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 ITM2BQ9Y287 266 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 HMGB3O15347 200 aaKnown RBP9.16□□□□□ -0.94
LPP-208ENST00000448637 PRPSAP1Q14558 356 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 KSR2Q6VAB6 950 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 COPS6Q7L5N1 327 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 PDCD7Q8N8D1 485 aaKnown RBP9.16□□□□□ -0.94
LPP-208ENST00000448637 MIGA1Q8NAN2 632 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 SPDYE1Q8NFV5 336 aaPredicted RBP9.16□□□□□ -0.94
LPP-208ENST00000448637 CABS1Q96KC9 395 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 LRGUKQ96M69 825 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 KRT12Q99456 494 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 ANGPTL3Q9Y5C1 460 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 IL16Q14005 1332 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 TTC41PQ6P2S7 1318 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 CEP104O60308 925 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 TRAPPC3LQ5T215 181 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 BSPRYQ5W0U4 402 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 ELMSAN1Q6PJG2 1045 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 ZBTB8OSQ8IWT0 167 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 PRPF38AQ8NAV1 312 aaKnown RBP9.16□□□□□ -0.94
LPP-208ENST00000448637 POMGNT1Q8WZA1 660 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 HDAC11Q96DB2 347 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 IRAK4Q9NWZ3 460 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 RAB20Q9NX57 234 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 ARHGAP42A6NI28 874 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 H0YCG3 227 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 IRS4O14654 1257 aaPredicted RBP9.16□□□□□ -0.94
LPP-208ENST00000448637 ABL1P00519 1130 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 SMCR8Q8TEV9 937 aaPredicted RBP9.16□□□□□ -0.94
LPP-208ENST00000448637 TTC1Q99614 292 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 LZTS2Q9BRK4 669 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 ORC6Q9Y5N6 252 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 DEXIO95424 95 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 EVCP57679 992 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 TSTA3Q13630 321 aaPredicted RBP9.16□□□□□ -0.94
LPP-208ENST00000448637 ZNF174Q15697 407 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 DHX32Q7L7V1 743 aaKnown RBP9.16□□□□□ -0.94
LPP-208ENST00000448637 KRT25Q7Z3Z0 450 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 MYCT1Q8N699 235 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 IGSF22Q8N9C0 903 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 DEPTORQ8TB45 409 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 JARID2Q92833 1246 aaPredicted RBP9.16□□□□□ -0.94
LPP-208ENST00000448637 AS3MTQ9HBK9 375 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 THEGQ9P2T0 379 aa9.16□□□□□ -0.94
LPP-208ENST00000448637 SPDYE2BA6NHP3 402 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 RAPGEF3O95398 923 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 TNNC2P02585 160 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 SPDYE6P0CI01 402 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 PABPC4Q13310 644 aaKnown RBP eCLIP9.15□□□□□ -0.94
LPP-208ENST00000448637 GNPTABQ3T906 1256 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.15□□□□□ -0.94
LPP-208ENST00000448637 FAM47CQ5HY64 1035 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 DENND2CQ68D51 928 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 SMC5Q8IY18 1101 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 CSGALNACT2Q8N6G5 542 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 ADPGKQ9BRR6 497 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 ESYT1Q9BSJ8 1104 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 ARAP1Q96P48 1450 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 CCNT1O60563 726 aaKnown RBP9.15□□□□□ -0.94
LPP-208ENST00000448637 ADCY7P51828 1080 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 WHAMMP3Q1A5X7 153 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 NCOA1Q15788 1441 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 NPHP3Q7Z494 1330 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 HEXIM1O94992 359 aaKnown RBP9.15□□□□□ -0.94
LPP-208ENST00000448637 PYGLP06737 847 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 TRIM27P14373 513 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 STX2P32856 288 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 RPS6KA1Q15418 735 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 PPP2R5EQ16537 467 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 ARHGAP45Q92619 1136 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 XAB2Q9HCS7 855 aaKnown RBP9.15□□□□□ -0.94
LPP-208ENST00000448637 HESX1Q9UBX0 185 aa9.15□□□□□ -0.94
LPP-208ENST00000448637 NMIQ13287 307 aaPredicted RBP9.15□□□□□ -0.95
LPP-208ENST00000448637 KRBA2Q6ZNG9 492 aa9.15□□□□□ -0.95
LPP-208ENST00000448637 PNMA8AQ86V59 439 aaPredicted RBP9.15□□□□□ -0.95
LPP-208ENST00000448637 NLRP7Q8WX94 980 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms