RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 CTGFP29279 349 aa23.85■■□□□ 1.41
VCP-203ENST00000448530 SH3TC2Q8TF17 1288 aa23.85■■□□□ 1.41
VCP-203ENST00000448530 RIOK1Q9BRS2 568 aaKnown RBP23.85■■□□□ 1.41
VCP-203ENST00000448530 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.85■■□□□ 1.41
VCP-203ENST00000448530 SERPINB13Q9UIV8 391 aa23.85■■□□□ 1.41
VCP-203ENST00000448530 ZBTB21Q9ULJ3 1066 aa23.85■■□□□ 1.41
VCP-203ENST00000448530 MTMR2Q13614 643 aa23.84■■□□□ 1.41
VCP-203ENST00000448530 SH3D19Q5HYK7 790 aa23.84■■□□□ 1.41
VCP-203ENST00000448530 EHD4Q9H223 541 aa23.84■■□□□ 1.41
VCP-203ENST00000448530 MYCP01106 439 aaPredicted RBP23.83■■□□□ 1.41
VCP-203ENST00000448530 POLR3DP05423 398 aaPredicted RBP23.83■■□□□ 1.41
VCP-203ENST00000448530 BACE1P56817 501 aa23.83■■□□□ 1.41
VCP-203ENST00000448530 EDC3Q96F86 508 aaKnown RBP23.83■■□□□ 1.41
VCP-203ENST00000448530 HAUS7Q99871 368 aa23.83■■□□□ 1.41
VCP-203ENST00000448530 NAV1Q8NEY1 1877 aa23.83■■□□□ 1.4
VCP-203ENST00000448530 C19orf81C9J6K1 198 aa23.82■■□□□ 1.4
VCP-203ENST00000448530 USP17L10C9JJH3 530 aa23.82■■□□□ 1.4
VCP-203ENST00000448530 SMARCA5O60264 1052 aaPredicted RBP23.82■■□□□ 1.4
VCP-203ENST00000448530 GCLCP48506 637 aaPredicted RBP23.82■■□□□ 1.4
VCP-203ENST00000448530 ANKRD13CQ8N6S4 541 aa23.82■■□□□ 1.4
VCP-203ENST00000448530 IRX3P78415 501 aaPredicted RBP23.81■■□□□ 1.4
VCP-203ENST00000448530 JAG1P78504 1218 aa23.81■■□□□ 1.4
VCP-203ENST00000448530 GPATCH3Q96I76 525 aa23.81■■□□□ 1.4
VCP-203ENST00000448530 CENPFP49454 3210 aa23.81■■□□□ 1.4
VCP-203ENST00000448530 TCRBV5S4A2TA0A5A2 114 aa23.8■■□□□ 1.4
VCP-203ENST00000448530 TNPO2O14787 897 aaKnown RBP23.8■■□□□ 1.4
VCP-203ENST00000448530 GH2P01242 217 aa23.8■■□□□ 1.4
VCP-203ENST00000448530 GRK4P32298 578 aa23.8■■□□□ 1.4
VCP-203ENST00000448530 PRKCZQ05513 592 aa23.8■■□□□ 1.4
VCP-203ENST00000448530 FAM110CQ1W6H9 321 aa23.8■■□□□ 1.4
VCP-203ENST00000448530 SHROOM1Q2M3G4 852 aaPredicted RBP23.8■■□□□ 1.4
VCP-203ENST00000448530 CERKLQ49MI3 558 aaPredicted RBP23.8■■□□□ 1.4
VCP-203ENST00000448530 TATDN1Q6P1N9 297 aa23.8■■□□□ 1.4
VCP-203ENST00000448530 ASCC2Q9H1I8 757 aaPredicted RBP23.8■■□□□ 1.4
VCP-203ENST00000448530 DCTPP1Q9H773 170 aa23.8■■□□□ 1.4
VCP-203ENST00000448530 MCM9Q9NXL9 1143 aa23.8■■□□□ 1.4
VCP-203ENST00000448530 BIN2Q9UBW5 565 aaPredicted RBP23.8■■□□□ 1.4
VCP-203ENST00000448530 MYH7P12883 1935 aa23.79■■□□□ 1.4
VCP-203ENST00000448530 EN2P19622 333 aaPredicted RBP23.79■■□□□ 1.4
VCP-203ENST00000448530 ADD2P35612 726 aa23.79■■□□□ 1.4
VCP-203ENST00000448530 ZSCAN25Q6NSZ9 544 aa23.79■■□□□ 1.4
VCP-203ENST00000448530 LCORLQ8N3X6 602 aa23.79■■□□□ 1.4
VCP-203ENST00000448530 FEZ1Q99689 392 aa23.79■■□□□ 1.4
VCP-203ENST00000448530 CABP5Q9NP86 173 aa23.79■■□□□ 1.4
VCP-203ENST00000448530 ECHDC1Q9NTX5 307 aa23.79■■□□□ 1.4
VCP-203ENST00000448530 PLCD1P51178 756 aa23.78■■□□□ 1.4
VCP-203ENST00000448530 ABCB5Q2M3G0 1257 aa23.78■■□□□ 1.4
VCP-203ENST00000448530 COA7Q96BR5 231 aa23.78■■□□□ 1.4
VCP-203ENST00000448530 ARMT1Q9H993 441 aa23.78■■□□□ 1.4
VCP-203ENST00000448530 DDX60LQ5H9U9 1706 aaKnown RBP23.77■■□□□ 1.4
VCP-203ENST00000448530 MBD4O95243 580 aa23.77■■□□□ 1.4
VCP-203ENST00000448530 RAB3GAP1Q15042 981 aa23.77■■□□□ 1.4
VCP-203ENST00000448530 USP17L2Q6R6M4 530 aa23.77■■□□□ 1.4
VCP-203ENST00000448530 SLAIN1Q8ND83 568 aa23.77■■□□□ 1.4
VCP-203ENST00000448530 SDR42E1Q8WUS8 393 aa23.77■■□□□ 1.4
VCP-203ENST00000448530 HOXA7P31268 230 aaPredicted RBP23.76■■□□□ 1.39
VCP-203ENST00000448530 RRP1P56182 461 aaKnown RBP23.76■■□□□ 1.39
VCP-203ENST00000448530 UBXN2AP68543 259 aa23.76■■□□□ 1.39
VCP-203ENST00000448530 DDRGK1Q96HY6 314 aa23.76■■□□□ 1.39
VCP-203ENST00000448530 DCP1AQ9NPI6 582 aaPredicted RBP23.76■■□□□ 1.39
VCP-203ENST00000448530 GABRQQ9UN88 632 aa23.76■■□□□ 1.39
VCP-203ENST00000448530 FLT3LGP49771 235 aa23.75■■□□□ 1.39
VCP-203ENST00000448530 UBE3CQ15386 1083 aa23.75■■□□□ 1.39
VCP-203ENST00000448530 AMOTL1Q8IY63 956 aa23.75■■□□□ 1.39
VCP-203ENST00000448530 YTHDC1Q96MU7 727 aaKnown RBP23.75■■□□□ 1.39
VCP-203ENST00000448530 ATP8A2Q9NTI2 1148 aa23.75■■□□□ 1.39
VCP-203ENST00000448530 ADCY3O60266 1144 aa23.74■■□□□ 1.39
VCP-203ENST00000448530 SHMT1P34896 483 aa23.74■■□□□ 1.39
VCP-203ENST00000448530 USP14P54578 494 aa23.74■■□□□ 1.39
VCP-203ENST00000448530 PRPF38BQ5VTL8 546 aaKnown RBP23.74■■□□□ 1.39
VCP-203ENST00000448530 TAOK2Q9UL54 1235 aa23.74■■□□□ 1.39
VCP-203ENST00000448530 MPHOSPH10O00566 681 aaKnown RBP23.73■■□□□ 1.39
VCP-203ENST00000448530 ZYXQ15942 572 aaKnown RBP23.73■■□□□ 1.39
VCP-203ENST00000448530 SLFNL1Q499Z3 407 aa23.73■■□□□ 1.39
VCP-203ENST00000448530 P2RX7Q99572 595 aaKnown RBP23.73■■□□□ 1.39
VCP-203ENST00000448530 MYH8P13535 1937 aa23.72■■□□□ 1.39
VCP-203ENST00000448530 HERVK_113P62684 666 aa23.72■■□□□ 1.39
VCP-203ENST00000448530 GABPAQ06546 454 aa23.72■■□□□ 1.39
VCP-203ENST00000448530 IRF5Q13568 498 aa23.72■■□□□ 1.39
VCP-203ENST00000448530 MTFR1Q15390 333 aa23.72■■□□□ 1.39
VCP-203ENST00000448530 GTF3C2Q8WUA4 911 aaPredicted RBP23.72■■□□□ 1.39
VCP-203ENST00000448530 EMILIN3Q9NT22 766 aa23.72■■□□□ 1.39
VCP-203ENST00000448530 MORF4L1Q9UBU8 362 aa23.72■■□□□ 1.39
VCP-203ENST00000448530 SWAP70Q9UH65 585 aa23.72■■□□□ 1.39
VCP-203ENST00000448530 BAZ2AQ9UIF9 1905 aaKnown RBP23.72■■□□□ 1.39
VCP-203ENST00000448530 DOCK3Q8IZD9 2030 aa23.71■■□□□ 1.39
VCP-203ENST00000448530 PRKAB2O43741 272 aa23.71■■□□□ 1.39
VCP-203ENST00000448530 CCL5P13501 91 aa23.71■■□□□ 1.39
VCP-203ENST00000448530 GPRC5AQ8NFJ5 357 aa23.71■■□□□ 1.39
VCP-203ENST00000448530 NKX2-3Q8TAU0 364 aa23.71■■□□□ 1.39
VCP-203ENST00000448530 PXYLP1Q8TE99 480 aa23.71■■□□□ 1.39
VCP-203ENST00000448530 KIAA1683Q9H0B3 1180 aa23.71■■□□□ 1.39
VCP-203ENST00000448530 RNF208Q9H0X6 261 aa23.71■■□□□ 1.39
VCP-203ENST00000448530 ZBTB47Q9UFB7 747 aaPredicted RBP23.71■■□□□ 1.39
VCP-203ENST00000448530 PCDHB15Q9Y5E8 787 aa23.71■■□□□ 1.39
VCP-203ENST00000448530 CYP2D6P10635 497 aa23.7■■□□□ 1.38
VCP-203ENST00000448530 ELNP15502 786 aa23.7■■□□□ 1.38
VCP-203ENST00000448530 CCAR1Q8IX12 1150 aaKnown RBP23.7■■□□□ 1.38
VCP-203ENST00000448530 C12orf42Q96LP6 360 aa23.7■■□□□ 1.38
VCP-203ENST00000448530 SLC4A4Q9Y6R1 1079 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms