RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ATP8A2Q9NTI2 1148 aa15.36■□□□□ 0.05
PRPF40A-203ENST00000448428 TRIM17Q9Y577 477 aa15.36■□□□□ 0.05
PRPF40A-203ENST00000448428 CYP2C8P10632 490 aa15.35■□□□□ 0.05
PRPF40A-203ENST00000448428 CYP2D6P10635 497 aa15.35■□□□□ 0.05
PRPF40A-203ENST00000448428 GABPAQ06546 454 aa15.35■□□□□ 0.05
PRPF40A-203ENST00000448428 C17orf99Q6UX52 265 aa15.35■□□□□ 0.05
PRPF40A-203ENST00000448428 OTOP1Q7RTM1 612 aa15.35■□□□□ 0.05
PRPF40A-203ENST00000448428 WDR18Q9BV38 432 aa15.35■□□□□ 0.05
PRPF40A-203ENST00000448428 AS3MTQ9HBK9 375 aa15.35■□□□□ 0.05
PRPF40A-203ENST00000448428 GINM1Q9NU53 330 aa15.35■□□□□ 0.05
PRPF40A-203ENST00000448428 STAP2Q9UGK3 403 aa15.35■□□□□ 0.05
PRPF40A-203ENST00000448428 CPA4Q9UI42 421 aa15.35■□□□□ 0.05
PRPF40A-203ENST00000448428 ZBTB21Q9ULJ3 1066 aa15.35■□□□□ 0.05
PRPF40A-203ENST00000448428 ADGRA2Q96PE1 1338 aa15.35■□□□□ 0.05
PRPF40A-203ENST00000448428 GH2P01242 217 aa15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 SHMT1P34896 483 aa15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 PDE1AP54750 535 aa15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 IRX6P78412 446 aaPredicted RBP15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 CERKLQ49MI3 558 aaPredicted RBP15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 SH3D19Q5HYK7 790 aa15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 TREML2Q5T2D2 321 aa15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 B4GALNT3Q6L9W6 998 aa15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 FBXO46Q6PJ61 603 aaPredicted RBP15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 OSBP2Q969R2 916 aa15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 STRBPQ96SI9 672 aaKnown RBP15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 EFCC1Q9HA90 598 aa15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 HPS5Q9UPZ3 1129 aa15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 SLC45A1Q9Y2W3 748 aa15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 SLC4A4Q9Y6R1 1079 aa15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 LOC285556D6RIA3 1793 aa15.34■□□□□ 0.05
PRPF40A-203ENST00000448428 ZSWIM8A7E2V4 1837 aa15.33■□□□□ 0.05
PRPF40A-203ENST00000448428 USP17L12C9JPN9 530 aa15.33■□□□□ 0.04
PRPF40A-203ENST00000448428 USP17L21D6R901 530 aa15.33■□□□□ 0.04
PRPF40A-203ENST00000448428 ZFYP08048 801 aaPredicted RBP15.33■□□□□ 0.04
PRPF40A-203ENST00000448428 HMGCS2P54868 508 aa15.33■□□□□ 0.04
PRPF40A-203ENST00000448428 BACE1P56817 501 aa15.33■□□□□ 0.04
PRPF40A-203ENST00000448428 PROCA1Q8NCQ7 364 aaPredicted RBP15.33■□□□□ 0.04
PRPF40A-203ENST00000448428 APPBP2Q92624 585 aa15.33■□□□□ 0.04
PRPF40A-203ENST00000448428 DYNLL2Q96FJ2 89 aa15.33■□□□□ 0.04
PRPF40A-203ENST00000448428 PARK7Q99497 189 aaKnown RBP15.33■□□□□ 0.04
PRPF40A-203ENST00000448428 LNPKQ9C0E8 428 aa15.33■□□□□ 0.04
PRPF40A-203ENST00000448428 AGTPBP1Q9UPW5 1226 aa15.33■□□□□ 0.04
PRPF40A-203ENST00000448428 MYH8P13535 1937 aa15.33■□□□□ 0.04
PRPF40A-203ENST00000448428 CYP2D7A0A087X1C5 515 aa15.32■□□□□ 0.04
PRPF40A-203ENST00000448428 SMIM22K7EJ46 135 aa15.32■□□□□ 0.04
PRPF40A-203ENST00000448428 LACTBP83111 547 aaPredicted RBP15.32■□□□□ 0.04
PRPF40A-203ENST00000448428 MTMR2Q13614 643 aa15.32■□□□□ 0.04
PRPF40A-203ENST00000448428 ABCB5Q2M3G0 1257 aa15.32■□□□□ 0.04
PRPF40A-203ENST00000448428 C12orf60Q5U649 245 aa15.32■□□□□ 0.04
PRPF40A-203ENST00000448428 ARHGAP39Q9C0H5 1083 aa15.32■□□□□ 0.04
PRPF40A-203ENST00000448428 PTPN22Q9Y2R2 807 aa15.32■□□□□ 0.04
PRPF40A-203ENST00000448428 GSG1L2A8MUP6 293 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 C19orf81C9J6K1 198 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 USP17L10C9JJH3 530 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 M0R2C6 588 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 ECM2O94769 699 aaPredicted RBP15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 BCRP11274 1271 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 NUCB1Q02818 461 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 RAB3GAP1Q15042 981 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 ARHGEF6Q15052 776 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 LRRFIP1Q32MZ4 808 aaKnown RBP15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 CTR9Q6PD62 1173 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 CHD1LQ86WJ1 897 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 SLC44A5Q8NCS7 719 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 DDRGK1Q96HY6 314 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 SEC62Q99442 399 aaKnown RBP15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 FSD1Q9BTV5 496 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 MGAMO43451 1857 aa15.31■□□□□ 0.04
PRPF40A-203ENST00000448428 GPAA1O43292 621 aa15.3■□□□□ 0.04
PRPF40A-203ENST00000448428 CTGFP29279 349 aa15.3■□□□□ 0.04
PRPF40A-203ENST00000448428 GUCY1A2P33402 732 aa15.3■□□□□ 0.04
PRPF40A-203ENST00000448428 KIF22Q14807 665 aa15.3■□□□□ 0.04
PRPF40A-203ENST00000448428 ZMYM1Q5SVZ6 1142 aa15.3■□□□□ 0.04
PRPF40A-203ENST00000448428 CABP5Q9NP86 173 aa15.3■□□□□ 0.04
PRPF40A-203ENST00000448428 SWAP70Q9UH65 585 aa15.3■□□□□ 0.04
PRPF40A-203ENST00000448428 CDK8P49336 464 aa15.29■□□□□ 0.04
PRPF40A-203ENST00000448428 SEPT2Q15019 361 aa15.29■□□□□ 0.04
PRPF40A-203ENST00000448428 AMOTL1Q8IY63 956 aa15.29■□□□□ 0.04
PRPF40A-203ENST00000448428 SMCR8Q8TEV9 937 aaPredicted RBP15.29■□□□□ 0.04
PRPF40A-203ENST00000448428 EVI5LQ96CN4 794 aa15.29■□□□□ 0.04
PRPF40A-203ENST00000448428 ASCC2Q9H1I8 757 aaPredicted RBP15.29■□□□□ 0.04
PRPF40A-203ENST00000448428 EMILIN3Q9NT22 766 aa15.29■□□□□ 0.04
PRPF40A-203ENST00000448428 TMOD4Q9NZQ9 345 aa15.29■□□□□ 0.04
PRPF40A-203ENST00000448428 TAOK2Q9UL54 1235 aa15.29■□□□□ 0.04
PRPF40A-203ENST00000448428 MPHOSPH10O00566 681 aaKnown RBP15.28■□□□□ 0.04
PRPF40A-203ENST00000448428 OSBPP22059 807 aa15.28■□□□□ 0.04
PRPF40A-203ENST00000448428 HOXA7P31268 230 aaPredicted RBP15.28■□□□□ 0.04
PRPF40A-203ENST00000448428 PSMC4P43686 418 aa15.28■□□□□ 0.04
PRPF40A-203ENST00000448428 PABPC4Q13310 644 aaKnown RBP eCLIP15.28■□□□□ 0.04
PRPF40A-203ENST00000448428 SBK1Q52WX2 424 aa15.28■□□□□ 0.04
PRPF40A-203ENST00000448428 GIMAP6Q6P9H5 292 aa15.28■□□□□ 0.04
PRPF40A-203ENST00000448428 USP17L2Q6R6M4 530 aa15.28■□□□□ 0.04
PRPF40A-203ENST00000448428 C16orf86Q6ZW13 317 aa15.28■□□□□ 0.04
PRPF40A-203ENST00000448428 PLEKHM2Q8IWE5 1019 aa15.28■□□□□ 0.04
PRPF40A-203ENST00000448428 ACER1Q8TDN7 264 aa15.28■□□□□ 0.04
PRPF40A-203ENST00000448428 TRIM47Q96LD4 638 aa15.28■□□□□ 0.04
PRPF40A-203ENST00000448428 PNMA3Q9UL41 463 aa15.28■□□□□ 0.04
PRPF40A-203ENST00000448428 PATL2C9JE40 543 aaKnown RBP15.27■□□□□ 0.04
PRPF40A-203ENST00000448428 GNRH1P01148 92 aa15.27■□□□□ 0.04
PRPF40A-203ENST00000448428 APPP05067 770 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms