RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 TATDN1Q6P1N9 297 aa30.03■■■□□ 2.4
UFD1-204ENST00000447868 EVI5LQ96CN4 794 aa30.03■■■□□ 2.4
UFD1-204ENST00000447868 ZCCHC17Q9NP64 241 aaKnown RBP30.03■■■□□ 2.4
UFD1-204ENST00000447868 ZBTB21Q9ULJ3 1066 aa30.03■■■□□ 2.4
UFD1-204ENST00000447868 GPAA1O43292 621 aa30.02■■■□□ 2.4
UFD1-204ENST00000447868 FASTKD5Q7L8L6 764 aaKnown RBP30.02■■■□□ 2.4
UFD1-204ENST00000447868 PLEKHM2Q8IWE5 1019 aa30.02■■■□□ 2.4
UFD1-204ENST00000447868 ZNF280CQ8ND82 737 aa30.02■■■□□ 2.4
UFD1-204ENST00000447868 AS3MTQ9HBK9 375 aa30.02■■■□□ 2.4
UFD1-204ENST00000447868 CYP2D7A0A087X1C5 515 aa30.01■■■□□ 2.39
UFD1-204ENST00000447868 SHMT1P34896 483 aa30.01■■■□□ 2.39
UFD1-204ENST00000447868 GPAT2Q6NUI2 795 aa30.01■■■□□ 2.39
UFD1-204ENST00000447868 AMOTL1Q8IY63 956 aa30.01■■■□□ 2.39
UFD1-204ENST00000447868 SEC62Q99442 399 aaKnown RBP30.01■■■□□ 2.39
UFD1-204ENST00000447868 TBC1D2Q9BYX2 928 aa30.01■■■□□ 2.39
UFD1-204ENST00000447868 MCOLN1Q9GZU1 580 aa30.01■■■□□ 2.39
UFD1-204ENST00000447868 USP17L12C9JPN9 530 aa30■■■□□ 2.39
UFD1-204ENST00000447868 USP17L21D6R901 530 aa30■■■□□ 2.39
UFD1-204ENST00000447868 GH2P01242 217 aa30■■■□□ 2.39
UFD1-204ENST00000447868 GABPAQ06546 454 aa30■■■□□ 2.39
UFD1-204ENST00000447868 CERKLQ49MI3 558 aaPredicted RBP30■■■□□ 2.39
UFD1-204ENST00000447868 CTU1Q7Z7A3 348 aaKnown RBP29.99■■■□□ 2.39
UFD1-204ENST00000447868 DYNLL2Q96FJ2 89 aa29.99■■■□□ 2.39
UFD1-204ENST00000447868 GINM1Q9NU53 330 aa29.99■■■□□ 2.39
UFD1-204ENST00000447868 TRIM6-TRIM34B2RNG4 842 aa29.98■■■□□ 2.39
UFD1-204ENST00000447868 SMIM22K7EJ46 135 aa29.98■■■□□ 2.39
UFD1-204ENST00000447868 ABCB5Q2M3G0 1257 aa29.98■■■□□ 2.39
UFD1-204ENST00000447868 ZMYM1Q5SVZ6 1142 aa29.98■■■□□ 2.39
UFD1-204ENST00000447868 IFFO2Q5TF58 517 aa29.98■■■□□ 2.39
UFD1-204ENST00000447868 C12orf60Q5U649 245 aa29.98■■■□□ 2.39
UFD1-204ENST00000447868 SLC44A5Q8NCS7 719 aa29.98■■■□□ 2.39
UFD1-204ENST00000447868 GSG1L2A8MUP6 293 aa29.97■■■□□ 2.39
UFD1-204ENST00000447868 HMGCS2P54868 508 aa29.97■■■□□ 2.39
UFD1-204ENST00000447868 CTR9Q6PD62 1173 aa29.97■■■□□ 2.39
UFD1-204ENST00000447868 WDR18Q9BV38 432 aa29.97■■■□□ 2.39
UFD1-204ENST00000447868 TLR2O60603 784 aa29.96■■■□□ 2.39
UFD1-204ENST00000447868 CAPN15O75808 1086 aa29.96■■■□□ 2.39
UFD1-204ENST00000447868 GNAT2P19087 354 aa29.96■■■□□ 2.39
UFD1-204ENST00000447868 SP3Q02447 781 aa29.96■■■□□ 2.39
UFD1-204ENST00000447868 MTMR2Q13614 643 aa29.96■■■□□ 2.39
UFD1-204ENST00000447868 RAB3GAP1Q15042 981 aa29.96■■■□□ 2.39
UFD1-204ENST00000447868 RILPL2Q969X0 211 aa29.96■■■□□ 2.39
UFD1-204ENST00000447868 OSBPL3Q9H4L5 887 aa29.96■■■□□ 2.39
UFD1-204ENST00000447868 MYH8P13535 1937 aa29.95■■■□□ 2.39
UFD1-204ENST00000447868 APPP05067 770 aa29.95■■■□□ 2.39
UFD1-204ENST00000447868 CYP2C8P10632 490 aa29.95■■■□□ 2.39
UFD1-204ENST00000447868 TREML2Q5T2D2 321 aa29.95■■■□□ 2.39
UFD1-204ENST00000447868 CD99L2Q8TCZ2 262 aa29.95■■■□□ 2.39
UFD1-204ENST00000447868 CABP5Q9NP86 173 aa29.95■■■□□ 2.39
UFD1-204ENST00000447868 ARPP21Q9UBL0 812 aaPredicted RBP29.95■■■□□ 2.39
UFD1-204ENST00000447868 SWAP70Q9UH65 585 aa29.95■■■□□ 2.39
UFD1-204ENST00000447868 MPHOSPH10O00566 681 aaKnown RBP29.94■■■□□ 2.38
UFD1-204ENST00000447868 ERO1AQ96HE7 468 aa29.94■■■□□ 2.38
UFD1-204ENST00000447868 ABHD8Q96I13 439 aa29.94■■■□□ 2.38
UFD1-204ENST00000447868 PARK7Q99497 189 aaKnown RBP29.94■■■□□ 2.38
UFD1-204ENST00000447868 CPA4Q9UI42 421 aa29.94■■■□□ 2.38
UFD1-204ENST00000447868 AGTPBP1Q9UPW5 1226 aa29.94■■■□□ 2.38
UFD1-204ENST00000447868 LOC285556D6RIA3 1793 aa29.93■■■□□ 2.38
UFD1-204ENST00000447868 TDO2P48775 406 aa29.93■■■□□ 2.38
UFD1-204ENST00000447868 BACE1P56817 501 aa29.93■■■□□ 2.38
UFD1-204ENST00000447868 GIMAP6Q6P9H5 292 aa29.93■■■□□ 2.38
UFD1-204ENST00000447868 CCDC129Q6ZRS4 1044 aa29.93■■■□□ 2.38
UFD1-204ENST00000447868 PROCA1Q8NCQ7 364 aaPredicted RBP29.93■■■□□ 2.38
UFD1-204ENST00000447868 EPB41L4AQ9HCS5 686 aaPredicted RBP29.93■■■□□ 2.38
UFD1-204ENST00000447868 PDE4AP27815 886 aa29.92■■■□□ 2.38
UFD1-204ENST00000447868 CDK8P49336 464 aa29.92■■■□□ 2.38
UFD1-204ENST00000447868 MINDY4BA8MYZ0 360 aa29.91■■■□□ 2.38
UFD1-204ENST00000447868 PATL2C9JE40 543 aaKnown RBP29.91■■■□□ 2.38
UFD1-204ENST00000447868 USP17L10C9JJH3 530 aa29.91■■■□□ 2.38
UFD1-204ENST00000447868 SH3D19Q5HYK7 790 aa29.91■■■□□ 2.38
UFD1-204ENST00000447868 C16orf86Q6ZW13 317 aa29.91■■■□□ 2.38
UFD1-204ENST00000447868 STK11IPQ8N1F8 1099 aa29.91■■■□□ 2.38
UFD1-204ENST00000447868 TMOD4Q9NZQ9 345 aa29.91■■■□□ 2.38
UFD1-204ENST00000447868 SLC45A1Q9Y2W3 748 aa29.91■■■□□ 2.38
UFD1-204ENST00000447868 TRIM17Q9Y577 477 aa29.91■■■□□ 2.38
UFD1-204ENST00000447868 GUCY1A2P33402 732 aa29.9■■■□□ 2.38
UFD1-204ENST00000447868 SEPT2Q15019 361 aa29.9■■■□□ 2.38
UFD1-204ENST00000447868 SBK1Q52WX2 424 aa29.9■■■□□ 2.38
UFD1-204ENST00000447868 C17orf99Q6UX52 265 aa29.9■■■□□ 2.38
UFD1-204ENST00000447868 IFNL3Q8IZI9 196 aa29.9■■■□□ 2.38
UFD1-204ENST00000447868 TAOK2Q9UL54 1235 aa29.9■■■□□ 2.38
UFD1-204ENST00000447868 ADGRA2Q96PE1 1338 aa29.9■■■□□ 2.38
UFD1-204ENST00000447868 C19orf81C9J6K1 198 aa29.89■■■□□ 2.38
UFD1-204ENST00000447868 FAM227BQ96M60 508 aa29.89■■■□□ 2.38
UFD1-204ENST00000447868 FEZ1Q99689 392 aa29.89■■■□□ 2.38
UFD1-204ENST00000447868 NACAP1Q9BZK3 213 aa29.89■■■□□ 2.38
UFD1-204ENST00000447868 ECM2O94769 699 aaPredicted RBP29.88■■■□□ 2.37
UFD1-204ENST00000447868 AKR1B1P15121 316 aa29.88■■■□□ 2.37
UFD1-204ENST00000447868 CAP1Q01518 475 aa29.88■■■□□ 2.37
UFD1-204ENST00000447868 ZYXQ15942 572 aaKnown RBP29.88■■■□□ 2.37
UFD1-204ENST00000447868 HELLSQ9NRZ9 838 aa29.88■■■□□ 2.37
UFD1-204ENST00000447868 A0A0D9SFI3 127 aa29.87■■■□□ 2.37
UFD1-204ENST00000447868 NMIQ13287 307 aaPredicted RBP29.87■■■□□ 2.37
UFD1-204ENST00000447868 PKN2Q16513 984 aaKnown RBP29.87■■■□□ 2.37
UFD1-204ENST00000447868 OTOP1Q7RTM1 612 aa29.87■■■□□ 2.37
UFD1-204ENST00000447868 ACER1Q8TDN7 264 aa29.87■■■□□ 2.37
UFD1-204ENST00000447868 SMCR8Q8TEV9 937 aaPredicted RBP29.87■■■□□ 2.37
UFD1-204ENST00000447868 PABPC4Q13310 644 aaKnown RBP eCLIP29.86■■■□□ 2.37
UFD1-204ENST00000447868 USP17L2Q6R6M4 530 aa29.86■■■□□ 2.37
UFD1-204ENST00000447868 TMEM179Q6ZVK1 233 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms