RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 FPGT-TNNI3KV9GXZ4 949 aa15.24■□□□□ 0.03
SSR4-205ENST00000447375 PTPRFP10586 1907 aa15.23■□□□□ 0.03
SSR4-205ENST00000447375 TMEM265A0A087WTH1 108 aa15.23■□□□□ 0.03
SSR4-205ENST00000447375 XRCC5P13010 732 aaKnown RBP15.23■□□□□ 0.03
SSR4-205ENST00000447375 CCND3P30281 292 aaPredicted RBP15.23■□□□□ 0.03
SSR4-205ENST00000447375 SMAD3P84022 425 aaKnown RBP15.23■□□□□ 0.03
SSR4-205ENST00000447375 MAP3K10Q02779 954 aa15.23■□□□□ 0.03
SSR4-205ENST00000447375 PABPC4Q13310 644 aaKnown RBP eCLIP15.23■□□□□ 0.031e-8■■■■■ 41.6
SSR4-205ENST00000447375 ZSCAN29Q8IWY8 852 aaPredicted RBP15.23■□□□□ 0.03
SSR4-205ENST00000447375 TRMT44Q8IYL2 757 aaKnown RBP15.23■□□□□ 0.03
SSR4-205ENST00000447375 NUDT12Q9BQG2 462 aa15.23■□□□□ 0.03
SSR4-205ENST00000447375 DENND2AQ9ULE3 1009 aa15.23■□□□□ 0.03
SSR4-205ENST00000447375 ENTPD3O75355 529 aa15.22■□□□□ 0.03
SSR4-205ENST00000447375 SLURP2P0DP57 97 aa15.22■□□□□ 0.03
SSR4-205ENST00000447375 ZKSCAN1P17029 563 aaPredicted RBP15.22■□□□□ 0.03
SSR4-205ENST00000447375 RGS3P49796 1198 aa15.22■□□□□ 0.03
SSR4-205ENST00000447375 C9orf50Q5SZB4 431 aa15.22■□□□□ 0.03
SSR4-205ENST00000447375 GORABQ5T7V8 394 aa15.22■□□□□ 0.03
SSR4-205ENST00000447375 EAF2Q96CJ1 260 aaPredicted RBP15.22■□□□□ 0.03
SSR4-205ENST00000447375 CRBNQ96SW2 442 aa15.22■□□□□ 0.03
SSR4-205ENST00000447375 PDS5AQ29RF7 1337 aaKnown RBP15.21■□□□□ 0.03
SSR4-205ENST00000447375 RAB11FIP3O75154 756 aa15.21■□□□□ 0.03
SSR4-205ENST00000447375 ATN1P54259 1190 aaPredicted RBP15.21■□□□□ 0.03
SSR4-205ENST00000447375 SPP2Q13103 211 aa15.21■□□□□ 0.03
SSR4-205ENST00000447375 RASGRF1Q13972 1273 aa15.21■□□□□ 0.03
SSR4-205ENST00000447375 SH3BP5LQ7L8J4 393 aa15.21■□□□□ 0.03
SSR4-205ENST00000447375 RHPN1Q8TCX5 695 aa15.21■□□□□ 0.03
SSR4-205ENST00000447375 SOCS4Q8WXH5 440 aa15.21■□□□□ 0.03
SSR4-205ENST00000447375 KIF1BPQ96EK5 621 aa15.21■□□□□ 0.03
SSR4-205ENST00000447375 IDI2Q9BXS1 227 aa15.21■□□□□ 0.03
SSR4-205ENST00000447375 ASCC2Q9H1I8 757 aaPredicted RBP15.21■□□□□ 0.03
SSR4-205ENST00000447375 MORF4L1Q9UBU8 362 aa15.21■□□□□ 0.03
SSR4-205ENST00000447375 PCDHB15Q9Y5E8 787 aa15.21■□□□□ 0.03
SSR4-205ENST00000447375 CDH23Q9H251 3354 aa15.21■□□□□ 0.03
SSR4-205ENST00000447375 SALL1Q9NSC2 1324 aa15.2■□□□□ 0.02
SSR4-205ENST00000447375 PHIPQ8WWQ0 1821 aa15.2■□□□□ 0.02
SSR4-205ENST00000447375 DNAH12Q6ZR08 3092 aa15.2■□□□□ 0.02
SSR4-205ENST00000447375 DDTLA6NHG4 134 aaPredicted RBP15.2■□□□□ 0.02
SSR4-205ENST00000447375 ARID4AP29374 1257 aaPredicted RBP15.2■□□□□ 0.02
SSR4-205ENST00000447375 DBNDD2Q9BQY9 259 aa15.2■□□□□ 0.02
SSR4-205ENST00000447375 SUPT16HQ9Y5B9 1047 aaKnown RBP15.2■□□□□ 0.02
SSR4-205ENST00000447375 UQCRFS1P1P0C7P4 283 aa15.19■□□□□ 0.02
SSR4-205ENST00000447375 PRDX5P30044 214 aa15.19■□□□□ 0.02
SSR4-205ENST00000447375 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
SSR4-205ENST00000447375 HMGCS2P54868 508 aa15.19■□□□□ 0.02
SSR4-205ENST00000447375 MAP3K12Q12852 859 aa15.19■□□□□ 0.02
SSR4-205ENST00000447375 AAMPQ13685 434 aa15.19■□□□□ 0.02
SSR4-205ENST00000447375 CCDC158Q5M9N0 1113 aa15.19■□□□□ 0.02
SSR4-205ENST00000447375 USP38Q8NB14 1042 aa15.19■□□□□ 0.02
SSR4-205ENST00000447375 ZNF280CQ8ND82 737 aa15.19■□□□□ 0.02
SSR4-205ENST00000447375 ZNF512BQ96KM6 892 aaPredicted RBP15.19■□□□□ 0.02
SSR4-205ENST00000447375 HMG20BQ9P0W2 317 aa15.19■□□□□ 0.02
SSR4-205ENST00000447375 DBNLQ9UJU6 430 aaKnown RBP15.19■□□□□ 0.02
SSR4-205ENST00000447375 ATAD5Q96QE3 1844 aa15.19■□□□□ 0.02
SSR4-205ENST00000447375 LDHBP07195 334 aaKnown RBP15.18■□□□□ 0.02
SSR4-205ENST00000447375 RTP1P59025 263 aa15.18■□□□□ 0.02
SSR4-205ENST00000447375 CCL14Q16627 93 aa15.18■□□□□ 0.02
SSR4-205ENST00000447375 ZGPATQ8N5A5 531 aaKnown RBP15.18■□□□□ 0.02
SSR4-205ENST00000447375 SPATA5Q8NB90 893 aa15.18■□□□□ 0.02
SSR4-205ENST00000447375 GPRC5AQ8NFJ5 357 aa15.18■□□□□ 0.02
SSR4-205ENST00000447375 CCDC8Q9H0W5 538 aaPredicted RBP15.18■□□□□ 0.02
SSR4-205ENST00000447375 DCTPP1Q9H773 170 aa15.18■□□□□ 0.02
SSR4-205ENST00000447375 IL1RAPL2Q9NP60 686 aa15.18■□□□□ 0.02
SSR4-205ENST00000447375 MYO5AQ9Y4I1 1855 aaKnown RBP15.18■□□□□ 0.02
SSR4-205ENST00000447375 PLXNB2O15031 1838 aa15.17■□□□□ 0.02
SSR4-205ENST00000447375 DOCK1Q14185 1865 aa15.17■□□□□ 0.02
SSR4-205ENST00000447375 RGS2P41220 211 aa15.17■□□□□ 0.02
SSR4-205ENST00000447375 MCAMP43121 646 aa15.17■□□□□ 0.02
SSR4-205ENST00000447375 AACSQ86V21 672 aa15.17■□□□□ 0.02
SSR4-205ENST00000447375 CLASRPQ8N2M8 674 aaKnown RBP15.17■□□□□ 0.02
SSR4-205ENST00000447375 USP6NLQ92738 828 aa15.17■□□□□ 0.02
SSR4-205ENST00000447375 BADQ92934 168 aa15.17■□□□□ 0.02
SSR4-205ENST00000447375 TBC1D2Q9BYX2 928 aa15.17■□□□□ 0.02
SSR4-205ENST00000447375 TLR7Q9NYK1 1049 aaKnown RBP15.17■□□□□ 0.02
SSR4-205ENST00000447375 ATP11BQ9Y2G3 1177 aa15.17■□□□□ 0.02
SSR4-205ENST00000447375 CDK5RAP2Q96SN8 1893 aa15.16■□□□□ 0.02
SSR4-205ENST00000447375 TTC28Q96AY4 2481 aa15.16■□□□□ 0.02
SSR4-205ENST00000447375 APBB1O00213 710 aa15.16■□□□□ 0.02
SSR4-205ENST00000447375 TBC1D12O60347 775 aa15.16■□□□□ 0.02
SSR4-205ENST00000447375 PEX10O60683 326 aa15.16■□□□□ 0.02
SSR4-205ENST00000447375 MAPK4P31152 587 aa15.16■□□□□ 0.02
SSR4-205ENST00000447375 IRX3P78415 501 aaPredicted RBP15.16■□□□□ 0.02
SSR4-205ENST00000447375 GRIN2CQ14957 1233 aa15.16■□□□□ 0.02
SSR4-205ENST00000447375 TTC39AQ5SRH9 613 aa15.16■□□□□ 0.02
SSR4-205ENST00000447375 SPTY2D1Q68D10 685 aaPredicted RBP15.16■□□□□ 0.02
SSR4-205ENST00000447375 PI16Q6UXB8 463 aa15.16■□□□□ 0.02
SSR4-205ENST00000447375 CCAR1Q8IX12 1150 aaKnown RBP15.16■□□□□ 0.02
SSR4-205ENST00000447375 OSBPL5Q9H0X9 879 aaPredicted RBP15.16■□□□□ 0.02
SSR4-205ENST00000447375 PRDM5Q9NQX1 630 aaPredicted RBP15.16■□□□□ 0.02
SSR4-205ENST00000447375 PICALMQ13492 652 aa15.15■□□□□ 0.02
SSR4-205ENST00000447375 SH3D19Q5HYK7 790 aa15.15■□□□□ 0.02
SSR4-205ENST00000447375 MORN1Q5T089 497 aa15.15■□□□□ 0.02
SSR4-205ENST00000447375 ATXN2LQ8WWM7 1075 aaKnown RBP15.15■□□□□ 0.02
SSR4-205ENST00000447375 LPAR1Q92633 364 aa15.15■□□□□ 0.02
SSR4-205ENST00000447375 P2RX7Q99572 595 aaKnown RBP15.15■□□□□ 0.02
SSR4-205ENST00000447375 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.15■□□□□ 0.02
SSR4-205ENST00000447375 TXNRD2Q9NNW7 524 aa15.15■□□□□ 0.02
SSR4-205ENST00000447375 DDX4Q9NQI0 724 aaKnown RBP15.15■□□□□ 0.02
SSR4-205ENST00000447375 ABCF2Q9UG63 623 aa15.15■□□□□ 0.02
SSR4-205ENST00000447375 DDX20Q9UHI6 824 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms