RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 LPAR1Q92633 364 aa8.83□□□□□ -1
LRRC28-203ENST00000447360 P2RX7Q99572 595 aaKnown RBP8.83□□□□□ -1
LRRC28-203ENST00000447360 APBA2Q99767 749 aa8.83□□□□□ -1
LRRC28-203ENST00000447360 WDR18Q9BV38 432 aa8.83□□□□□ -1
LRRC28-203ENST00000447360 TXNRD2Q9NNW7 524 aa8.83□□□□□ -1
LRRC28-203ENST00000447360 GTF3C3Q9Y5Q9 886 aa8.83□□□□□ -1
LRRC28-203ENST00000447360 PLA2G5P39877 138 aa8.82□□□□□ -1
LRRC28-203ENST00000447360 BTDP43251 543 aa8.82□□□□□ -1
LRRC28-203ENST00000447360 ATN1P54259 1190 aaPredicted RBP8.82□□□□□ -1
LRRC28-203ENST00000447360 ERVK-9P63128 1117 aa8.82□□□□□ -1
LRRC28-203ENST00000447360 ERVK-24P63145 666 aa8.82□□□□□ -1
LRRC28-203ENST00000447360 CCL14Q16627 93 aa8.82□□□□□ -1
LRRC28-203ENST00000447360 C9orf50Q5SZB4 431 aa8.82□□□□□ -1
LRRC28-203ENST00000447360 MFSD14CQ5VZR4 134 aa8.82□□□□□ -1
LRRC28-203ENST00000447360 GPR142Q7Z601 462 aa8.82□□□□□ -1
LRRC28-203ENST00000447360 PLEKHH3Q7Z736 793 aa8.82□□□□□ -1
LRRC28-203ENST00000447360 TMOD4Q9NZQ9 345 aa8.82□□□□□ -1
LRRC28-203ENST00000447360 RBPJLQ9UBG7 517 aa8.82□□□□□ -1
LRRC28-203ENST00000447360 DDX20Q9UHI6 824 aaKnown RBP8.82□□□□□ -1
LRRC28-203ENST00000447360 HERC5Q9UII4 1024 aaKnown RBP8.82□□□□□ -1
LRRC28-203ENST00000447360 CACNA1FO60840 1977 aa8.82□□□□□ -1
LRRC28-203ENST00000447360 AK9Q5TCS8 1911 aa8.82□□□□□ -1
LRRC28-203ENST00000447360 PDS5AQ29RF7 1337 aaKnown RBP8.81□□□□□ -1
LRRC28-203ENST00000447360 XIRP2A4UGR9 3374 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 GPR75-ASB3A0A0A6YYF3 556 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 FAM196BA6NMK8 535 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 C19orf81C9J6K1 198 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 RFX5P48382 616 aaPredicted RBP8.81□□□□□ -1
LRRC28-203ENST00000447360 RHBDL3P58872 404 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 RTP1P59025 263 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 MAP2K5Q13163 448 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 MTMR2Q13614 643 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 ATP2B3Q16720 1220 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 Q3C1V9 767 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 SPTY2D1Q68D10 685 aaPredicted RBP8.81□□□□□ -1
LRRC28-203ENST00000447360 ATG9AQ7Z3C6 839 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 FAM122AQ96E09 287 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 EDC3Q96F86 508 aaKnown RBP8.81□□□□□ -1
LRRC28-203ENST00000447360 PORCNQ9H237 461 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 CEP126Q9P2H0 1117 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 PTPRFP10586 1907 aa8.81□□□□□ -1
LRRC28-203ENST00000447360 MROH7-TTC4A0A0A0MT08 1334 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 NCOR1O75376 2440 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 PEX10O60683 326 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 GLRX3O76003 335 aaKnown RBP8.8□□□□□ -1
LRRC28-203ENST00000447360 CIAO1O76071 339 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 ASNSP08243 561 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 PHKA1P46020 1223 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 GSE1Q14687 1217 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 SNX17Q15036 470 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 SLC39A5Q6ZMH5 540 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 ARRDC4Q8NCT1 418 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 ATXN2LQ8WWM7 1075 aaKnown RBP8.8□□□□□ -1
LRRC28-203ENST00000447360 BADQ92934 168 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 USP44Q9H0E7 712 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 GINM1Q9NU53 330 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 ABCF2Q9UG63 623 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 ATP11BQ9Y2G3 1177 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 DOCK1Q14185 1865 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 PHIPQ8WWQ0 1821 aa8.8□□□□□ -1
LRRC28-203ENST00000447360 USP17L10C9JJH3 530 aa8.79□□□□□ -1
LRRC28-203ENST00000447360 HOXC6P09630 235 aa8.79□□□□□ -1
LRRC28-203ENST00000447360 CCNA1P78396 465 aa8.79□□□□□ -1
LRRC28-203ENST00000447360 MECOMQ03112 1051 aa8.79□□□□□ -1
LRRC28-203ENST00000447360 RASGRF1Q13972 1273 aa8.79□□□□□ -1
LRRC28-203ENST00000447360 RRP1BQ14684 758 aaKnown RBP8.79□□□□□ -1
LRRC28-203ENST00000447360 C1orf53Q5VUE5 145 aa8.79□□□□□ -1
LRRC28-203ENST00000447360 CCDC102BQ68D86 513 aa8.79□□□□□ -1
LRRC28-203ENST00000447360 CWC22Q9HCG8 908 aaKnown RBP8.79□□□□□ -1
LRRC28-203ENST00000447360 PRDM5Q9NQX1 630 aaPredicted RBP8.79□□□□□ -1
LRRC28-203ENST00000447360 PI4KBQ9UBF8 816 aa8.79□□□□□ -1
LRRC28-203ENST00000447360 RAPGEFL1Q9UHV5 662 aa8.79□□□□□ -1
LRRC28-203ENST00000447360 RABGAP1Q9Y3P9 1069 aa8.79□□□□□ -1
LRRC28-203ENST00000447360 DOCK2Q92608 1830 aa8.79□□□□□ -1
LRRC28-203ENST00000447360 LOC285556D6RIA3 1793 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 PLXNB2O15031 1838 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 SLC15A5A6NIM6 579 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 KBTBD13C9JR72 458 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 PITPNM1O00562 1244 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 IGHA2P01877 340 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 LDHCP07864 332 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 CNGA1P29973 690 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 IL15P40933 162 aaPredicted RBP8.78□□□□□ -1
LRRC28-203ENST00000447360 GSTO1P78417 241 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 ATP2B2Q01814 1243 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 GRIN2CQ14957 1233 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 POTEEQ6S8J3 1075 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 USP38Q8NB14 1042 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 PAGR1Q9BTK6 254 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 DHX36Q9H2U1 1008 aaKnown RBP8.78□□□□□ -1
LRRC28-203ENST00000447360 PDLIM7Q9NR12 457 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 FLRT1Q9NZU1 646 aa8.78□□□□□ -1
LRRC28-203ENST00000447360 TRIM43BA6NCK2 446 aa8.77□□□□□ -1.01
LRRC28-203ENST00000447360 ANP32CO43423 234 aa8.77□□□□□ -1.01
LRRC28-203ENST00000447360 PTPREP23469 700 aa8.77□□□□□ -1.01
LRRC28-203ENST00000447360 MAP3K12Q12852 859 aa8.77□□□□□ -1.01
LRRC28-203ENST00000447360 GRB14Q14449 540 aa8.77□□□□□ -1.01
LRRC28-203ENST00000447360 TMEM132AQ24JP5 1023 aa8.77□□□□□ -1.01
LRRC28-203ENST00000447360 TRIM60Q495X7 471 aa8.77□□□□□ -1.01
LRRC28-203ENST00000447360 GJC2Q5T442 439 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms