RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SLC44A5Q8NCS7 719 aa17.83■□□□□ 0.44
HDAC4-204ENST00000446876 EVI5LQ96CN4 794 aa17.83■□□□□ 0.44
HDAC4-204ENST00000446876 DYNLL2Q96FJ2 89 aa17.83■□□□□ 0.44
HDAC4-204ENST00000446876 ZBTB21Q9ULJ3 1066 aa17.83■□□□□ 0.44
HDAC4-204ENST00000446876 USP17L5A8MUK1 530 aa17.82■□□□□ 0.44
HDAC4-204ENST00000446876 USP17L12C9JPN9 530 aa17.82■□□□□ 0.44
HDAC4-204ENST00000446876 USP17L21D6R901 530 aa17.82■□□□□ 0.44
HDAC4-204ENST00000446876 GABPAQ06546 454 aa17.82■□□□□ 0.44
HDAC4-204ENST00000446876 SPP2Q13103 211 aa17.82■□□□□ 0.44
HDAC4-204ENST00000446876 LRRFIP1Q32MZ4 808 aaKnown RBP17.82■□□□□ 0.44
HDAC4-204ENST00000446876 GPAT2Q6NUI2 795 aa17.82■□□□□ 0.44
HDAC4-204ENST00000446876 TATDN1Q6P1N9 297 aa17.82■□□□□ 0.44
HDAC4-204ENST00000446876 CCDC129Q6ZRS4 1044 aa17.82■□□□□ 0.44
HDAC4-204ENST00000446876 ZSWIM8A7E2V4 1837 aa17.82■□□□□ 0.44
HDAC4-204ENST00000446876 GSG1L2A8MUP6 293 aa17.81■□□□□ 0.44
HDAC4-204ENST00000446876 TRIM6-TRIM34B2RNG4 842 aa17.81■□□□□ 0.44
HDAC4-204ENST00000446876 GH2P01242 217 aa17.81■□□□□ 0.44
HDAC4-204ENST00000446876 ASNSP08243 561 aa17.81■□□□□ 0.44
HDAC4-204ENST00000446876 ANKRD23Q86SG2 305 aa17.81■□□□□ 0.44
HDAC4-204ENST00000446876 ZNF280CQ8ND82 737 aa17.81■□□□□ 0.44
HDAC4-204ENST00000446876 RILPL2Q969X0 211 aa17.81■□□□□ 0.44
HDAC4-204ENST00000446876 EPB41L4AQ9HCS5 686 aaPredicted RBP17.81■□□□□ 0.44
HDAC4-204ENST00000446876 PDHXO00330 501 aa17.8■□□□□ 0.44
HDAC4-204ENST00000446876 FKTNO75072 461 aa17.8■□□□□ 0.44
HDAC4-204ENST00000446876 CERKLQ49MI3 558 aaPredicted RBP17.8■□□□□ 0.44
HDAC4-204ENST00000446876 C12orf60Q5U649 245 aa17.8■□□□□ 0.44
HDAC4-204ENST00000446876 CTR9Q6PD62 1173 aa17.8■□□□□ 0.44
HDAC4-204ENST00000446876 DDRGK1Q96HY6 314 aa17.8■□□□□ 0.44
HDAC4-204ENST00000446876 OSBPL3Q9H4L5 887 aa17.8■□□□□ 0.44
HDAC4-204ENST00000446876 ZFYVE28Q9HCC9 887 aa17.8■□□□□ 0.44
HDAC4-204ENST00000446876 HMGCS2P54868 508 aa17.79■□□□□ 0.44
HDAC4-204ENST00000446876 MTMR2Q13614 643 aa17.79■□□□□ 0.44
HDAC4-204ENST00000446876 ABCB5Q2M3G0 1257 aa17.79■□□□□ 0.44
HDAC4-204ENST00000446876 NOM1Q5C9Z4 860 aaKnown RBP17.79■□□□□ 0.44
HDAC4-204ENST00000446876 TREML2Q5T2D2 321 aa17.79■□□□□ 0.44
HDAC4-204ENST00000446876 FAM227BQ96M60 508 aa17.79■□□□□ 0.44
HDAC4-204ENST00000446876 AS3MTQ9HBK9 375 aa17.79■□□□□ 0.44
HDAC4-204ENST00000446876 A0A0D9SFI3 127 aa17.78■□□□□ 0.44
HDAC4-204ENST00000446876 APPP05067 770 aa17.78■□□□□ 0.44
HDAC4-204ENST00000446876 RAB3GAP1Q15042 981 aa17.78■□□□□ 0.44
HDAC4-204ENST00000446876 FASTKD5Q7L8L6 764 aaKnown RBP17.78■□□□□ 0.44
HDAC4-204ENST00000446876 AMOTL1Q8IY63 956 aa17.78■□□□□ 0.44
HDAC4-204ENST00000446876 STK11IPQ8N1F8 1099 aa17.78■□□□□ 0.44
HDAC4-204ENST00000446876 MCOLN1Q9GZU1 580 aa17.78■□□□□ 0.44
HDAC4-204ENST00000446876 ZCCHC17Q9NP64 241 aaKnown RBP17.78■□□□□ 0.44
HDAC4-204ENST00000446876 ARPP21Q9UBL0 812 aaPredicted RBP17.78■□□□□ 0.44
HDAC4-204ENST00000446876 MPHOSPH10O00566 681 aaKnown RBP17.77■□□□□ 0.44
HDAC4-204ENST00000446876 CYP2C8P10632 490 aa17.77■□□□□ 0.44
HDAC4-204ENST00000446876 GNAT2P19087 354 aa17.77■□□□□ 0.44
HDAC4-204ENST00000446876 GUCY1A2P33402 732 aa17.77■□□□□ 0.44
HDAC4-204ENST00000446876 TDO2P48775 406 aa17.77■□□□□ 0.44
HDAC4-204ENST00000446876 CAP1Q01518 475 aa17.77■□□□□ 0.44
HDAC4-204ENST00000446876 NMIQ13287 307 aaPredicted RBP17.77■□□□□ 0.44
HDAC4-204ENST00000446876 CD99L2Q8TCZ2 262 aa17.77■□□□□ 0.44
HDAC4-204ENST00000446876 WDR18Q9BV38 432 aa17.77■□□□□ 0.44
HDAC4-204ENST00000446876 TBC1D2Q9BYX2 928 aa17.77■□□□□ 0.44
HDAC4-204ENST00000446876 GINM1Q9NU53 330 aa17.77■□□□□ 0.44
HDAC4-204ENST00000446876 CPA4Q9UI42 421 aa17.77■□□□□ 0.44
HDAC4-204ENST00000446876 ADGRA2Q96PE1 1338 aa17.76■□□□□ 0.43
HDAC4-204ENST00000446876 MINDY4BA8MYZ0 360 aa17.76■□□□□ 0.43
HDAC4-204ENST00000446876 FOXP2O15409 715 aa17.76■□□□□ 0.43
HDAC4-204ENST00000446876 TLR2O60603 784 aa17.76■□□□□ 0.43
HDAC4-204ENST00000446876 ECM2O94769 699 aaPredicted RBP17.76■□□□□ 0.43
HDAC4-204ENST00000446876 AKR1B1P15121 316 aa17.76■□□□□ 0.43
HDAC4-204ENST00000446876 CDK8P49336 464 aa17.76■□□□□ 0.43
HDAC4-204ENST00000446876 SEPT2Q15019 361 aa17.76■□□□□ 0.43
HDAC4-204ENST00000446876 C16orf86Q6ZW13 317 aa17.76■□□□□ 0.43
HDAC4-204ENST00000446876 CTU1Q7Z7A3 348 aaKnown RBP17.76■□□□□ 0.43
HDAC4-204ENST00000446876 CLEC10AQ8IUN9 316 aa17.76■□□□□ 0.43
HDAC4-204ENST00000446876 IFNL3Q8IZI9 196 aa17.76■□□□□ 0.43
HDAC4-204ENST00000446876 SWAP70Q9UH65 585 aa17.76■□□□□ 0.43
HDAC4-204ENST00000446876 AGTPBP1Q9UPW5 1226 aa17.76■□□□□ 0.43
HDAC4-204ENST00000446876 PATL2C9JE40 543 aaKnown RBP17.75■□□□□ 0.43
HDAC4-204ENST00000446876 BACE1P56817 501 aa17.75■□□□□ 0.43
HDAC4-204ENST00000446876 SP3Q02447 781 aa17.75■□□□□ 0.43
HDAC4-204ENST00000446876 ZYXQ15942 572 aaKnown RBP17.75■□□□□ 0.43
HDAC4-204ENST00000446876 SBK1Q52WX2 424 aa17.75■□□□□ 0.43
HDAC4-204ENST00000446876 SH3D19Q5HYK7 790 aa17.75■□□□□ 0.43
HDAC4-204ENST00000446876 VPS53Q5VIR6 699 aa17.75■□□□□ 0.43
HDAC4-204ENST00000446876 GIMAP6Q6P9H5 292 aa17.75■□□□□ 0.43
HDAC4-204ENST00000446876 ACER1Q8TDN7 264 aa17.75■□□□□ 0.43
HDAC4-204ENST00000446876 PARK7Q99497 189 aaKnown RBP17.75■□□□□ 0.43
HDAC4-204ENST00000446876 CABP5Q9NP86 173 aa17.75■□□□□ 0.43
HDAC4-204ENST00000446876 USP17L10C9JJH3 530 aa17.74■□□□□ 0.43
HDAC4-204ENST00000446876 CAPN15O75808 1086 aa17.74■□□□□ 0.43
HDAC4-204ENST00000446876 GSPT1P15170 499 aaKnown RBP17.74■□□□□ 0.43
HDAC4-204ENST00000446876 SDSP20132 328 aa17.74■□□□□ 0.43
HDAC4-204ENST00000446876 TTC22Q5TAA0 569 aa17.74■□□□□ 0.43
HDAC4-204ENST00000446876 ZNF589Q86UQ0 364 aaPredicted RBP17.74■□□□□ 0.43
HDAC4-204ENST00000446876 PROCA1Q8NCQ7 364 aaPredicted RBP17.74■□□□□ 0.43
HDAC4-204ENST00000446876 FEZ1Q99689 392 aa17.74■□□□□ 0.43
HDAC4-204ENST00000446876 HELLSQ9NRZ9 838 aa17.74■□□□□ 0.43
HDAC4-204ENST00000446876 ROBO3Q96MS0 1386 aa17.74■□□□□ 0.43
HDAC4-204ENST00000446876 GREB1LQ9C091 1923 aaPredicted RBP17.74■□□□□ 0.43
HDAC4-204ENST00000446876 C17orf99Q6UX52 265 aa17.73■□□□□ 0.43
HDAC4-204ENST00000446876 SKAP1Q86WV1 359 aa17.73■□□□□ 0.43
HDAC4-204ENST00000446876 ERO1AQ96HE7 468 aa17.73■□□□□ 0.43
HDAC4-204ENST00000446876 ABHD8Q96I13 439 aa17.73■□□□□ 0.43
HDAC4-204ENST00000446876 ARHGAP39Q9C0H5 1083 aa17.73■□□□□ 0.43
HDAC4-204ENST00000446876 NAPBQ9H115 298 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms