RNA–Protein interactions for RNA: ENST00000446836.5

CCDC12-203, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-203ENST00000446836 RNF41Q9H4P4 317 aaPredicted RBP12.94□□□□□ -0.34
CCDC12-203ENST00000446836 ELP3Q9H9T3 547 aa12.94□□□□□ -0.34
CCDC12-203ENST00000446836 MKNK2Q9HBH9 465 aa12.94□□□□□ -0.34
CCDC12-203ENST00000446836 AS3MTQ9HBK9 375 aa12.94□□□□□ -0.34
CCDC12-203ENST00000446836 CABP5Q9NP86 173 aa12.94□□□□□ -0.34
CCDC12-203ENST00000446836 LAMA4Q16363 1823 aa12.93□□□□□ -0.34
CCDC12-203ENST00000446836 ATAD5Q96QE3 1844 aa12.93□□□□□ -0.34
CCDC12-203ENST00000446836 FAM155AB1AL88 458 aaPredicted RBP12.93□□□□□ -0.34
CCDC12-203ENST00000446836 PTPRAP18433 802 aa12.93□□□□□ -0.34
CCDC12-203ENST00000446836 VEGFBP49765 207 aa12.93□□□□□ -0.34
CCDC12-203ENST00000446836 INHBEP58166 350 aa12.93□□□□□ -0.34
CCDC12-203ENST00000446836 ABCB5Q2M3G0 1257 aa12.93□□□□□ -0.34
CCDC12-203ENST00000446836 SPRYD7Q5W111 196 aa12.93□□□□□ -0.34
CCDC12-203ENST00000446836 CYP4F22Q6NT55 531 aa12.93□□□□□ -0.34
CCDC12-203ENST00000446836 TMEM179Q6ZVK1 233 aa12.93□□□□□ -0.34
CCDC12-203ENST00000446836 MAP4K1Q92918 833 aa12.93□□□□□ -0.34
CCDC12-203ENST00000446836 OPTNQ96CV9 577 aa12.93□□□□□ -0.34
CCDC12-203ENST00000446836 DYNLL2Q96FJ2 89 aa12.93□□□□□ -0.34
CCDC12-203ENST00000446836 ZBTB21Q9ULJ3 1066 aa12.93□□□□□ -0.34
CCDC12-203ENST00000446836 THSD7BQ9C0I4 1608 aa12.92□□□□□ -0.34
CCDC12-203ENST00000446836 MANSC4A6NHS7 340 aaPredicted RBP12.92□□□□□ -0.34
CCDC12-203ENST00000446836 USP17L5A8MUK1 530 aa12.92□□□□□ -0.34
CCDC12-203ENST00000446836 CXCL11O14625 94 aa12.92□□□□□ -0.34
CCDC12-203ENST00000446836 EPB41L2O43491 1005 aaKnown RBP12.92□□□□□ -0.34
CCDC12-203ENST00000446836 REC8O95072 547 aa12.92□□□□□ -0.34
CCDC12-203ENST00000446836 FGRP09769 529 aa12.92□□□□□ -0.34
CCDC12-203ENST00000446836 SLURP2P0DP57 97 aa12.92□□□□□ -0.34
CCDC12-203ENST00000446836 ZNF444Q8N0Y2 327 aaPredicted RBP12.92□□□□□ -0.34
CCDC12-203ENST00000446836 DNAJC5GQ8N7S2 189 aa12.92□□□□□ -0.34
CCDC12-203ENST00000446836 OTUD5Q96G74 571 aa12.92□□□□□ -0.34
CCDC12-203ENST00000446836 ANO2Q9NQ90 1003 aa12.92□□□□□ -0.34
CCDC12-203ENST00000446836 ORC4O43929 436 aa12.91□□□□□ -0.34
CCDC12-203ENST00000446836 GH2P01242 217 aa12.91□□□□□ -0.34
CCDC12-203ENST00000446836 GTF2A2P52657 109 aa12.91□□□□□ -0.34
CCDC12-203ENST00000446836 EVX2Q03828 476 aa12.91□□□□□ -0.34
CCDC12-203ENST00000446836 SREBF2Q12772 1141 aa12.91□□□□□ -0.34
CCDC12-203ENST00000446836 RRP1BQ14684 758 aaKnown RBP12.91□□□□□ -0.34
CCDC12-203ENST00000446836 PPP4R3BQ5MIZ7 849 aa12.91□□□□□ -0.34
CCDC12-203ENST00000446836 AKNAD1Q5T1N1 836 aa12.91□□□□□ -0.34
CCDC12-203ENST00000446836 MFSD6Q6ZSS7 791 aa12.91□□□□□ -0.34
CCDC12-203ENST00000446836 SLC44A5Q8NCS7 719 aa12.91□□□□□ -0.34
CCDC12-203ENST00000446836 STAG1Q8WVM7 1258 aa12.91□□□□□ -0.34
CCDC12-203ENST00000446836 WDR18Q9BV38 432 aa12.91□□□□□ -0.34
CCDC12-203ENST00000446836 LSG1Q9H089 658 aaKnown RBP12.91□□□□□ -0.34
CCDC12-203ENST00000446836 KCNH4Q9UQ05 1017 aa12.91□□□□□ -0.34
CCDC12-203ENST00000446836 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCDC12-203ENST00000446836 ZHX2Q9Y6X8 837 aa12.91□□□□□ -0.34
CCDC12-203ENST00000446836 MPHOSPH10O00566 681 aaKnown RBP12.9□□□□□ -0.34
CCDC12-203ENST00000446836 GDF11O95390 407 aa12.9□□□□□ -0.34
CCDC12-203ENST00000446836 RASA1P20936 1047 aa12.9□□□□□ -0.34
CCDC12-203ENST00000446836 PTH1RQ03431 593 aa12.9□□□□□ -0.34
CCDC12-203ENST00000446836 GRM1Q13255 1194 aa12.9□□□□□ -0.34
CCDC12-203ENST00000446836 SNAPC2Q13487 334 aa12.9□□□□□ -0.34
CCDC12-203ENST00000446836 RNF20Q5VTR2 975 aa12.9□□□□□ -0.34
CCDC12-203ENST00000446836 ZNF280CQ8ND82 737 aa12.9□□□□□ -0.34
CCDC12-203ENST00000446836 CNNM2Q9H8M5 875 aa12.9□□□□□ -0.34
CCDC12-203ENST00000446836 KANSL2Q9H9L4 492 aa12.9□□□□□ -0.34
CCDC12-203ENST00000446836 AFG3L2Q9Y4W6 797 aa12.9□□□□□ -0.34
CCDC12-203ENST00000446836 PLIN4Q96Q06 1357 aa12.9□□□□□ -0.34
CCDC12-203ENST00000446836 TESPA1A2RU30 521 aaPredicted RBP12.89□□□□□ -0.35
CCDC12-203ENST00000446836 C19orf81C9J6K1 198 aa12.89□□□□□ -0.35
CCDC12-203ENST00000446836 SMIM22K7EJ46 135 aa12.89□□□□□ -0.35
CCDC12-203ENST00000446836 IRF6O14896 467 aa12.89□□□□□ -0.35
CCDC12-203ENST00000446836 CETPP11597 493 aa12.89□□□□□ -0.35
CCDC12-203ENST00000446836 AKR1B1P15121 316 aa12.89□□□□□ -0.35
CCDC12-203ENST00000446836 HAND2P61296 217 aa12.89□□□□□ -0.35
CCDC12-203ENST00000446836 KIF23Q02241 960 aaPredicted RBP12.89□□□□□ -0.35
CCDC12-203ENST00000446836 MAP2K1Q02750 393 aaPredicted RBP12.89□□□□□ -0.35
CCDC12-203ENST00000446836 CTDSPL2Q05D32 466 aa12.89□□□□□ -0.35
CCDC12-203ENST00000446836 RAB3GAP1Q15042 981 aa12.89□□□□□ -0.35
CCDC12-203ENST00000446836 SH2D4AQ9H788 454 aa12.89□□□□□ -0.35
CCDC12-203ENST00000446836 RBM8AQ9Y5S9 174 aaKnown RBP12.89□□□□□ -0.35
CCDC12-203ENST00000446836 PHIPQ8WWQ0 1821 aa12.89□□□□□ -0.35
CCDC12-203ENST00000446836 TSPY3P0CV98 308 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 TSPY8P0CW00 308 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 GJA5P36382 358 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 TM4SF4P48230 202 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 USP14P54578 494 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 JAG1P78504 1218 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 TRDNQ13061 729 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 OTUD7BQ6GQQ9 843 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 FASTKD5Q7L8L6 764 aaKnown RBP12.88□□□□□ -0.35
CCDC12-203ENST00000446836 JMYQ8N9B5 988 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 NEDD1Q8NHV4 660 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 ESR2Q92731 530 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 KRT23Q9C075 422 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 ARHGEF10LQ9HCE6 1279 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 ZCCHC17Q9NP64 241 aaKnown RBP12.88□□□□□ -0.35
CCDC12-203ENST00000446836 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.88□□□□□ -0.35
CCDC12-203ENST00000446836 SYNPO2Q9UMS6 1093 aa12.88□□□□□ -0.35
CCDC12-203ENST00000446836 GREB1LQ9C091 1923 aaPredicted RBP12.88□□□□□ -0.35
CCDC12-203ENST00000446836 A0A0G2JLL6 359 aaPredicted RBP12.87□□□□□ -0.35
CCDC12-203ENST00000446836 TSPY2A6NKD2 308 aa12.87□□□□□ -0.35
CCDC12-203ENST00000446836 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
CCDC12-203ENST00000446836 RANBP6O60518 1105 aaKnown RBP12.87□□□□□ -0.35
CCDC12-203ENST00000446836 AOC2O75106 756 aa12.87□□□□□ -0.35
CCDC12-203ENST00000446836 PRDM1O75626 825 aa12.87□□□□□ -0.35
CCDC12-203ENST00000446836 ALDH1A1P00352 501 aa12.87□□□□□ -0.35
CCDC12-203ENST00000446836 CYP21A2P08686 494 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms