RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 ZMYND8Q9ULU4 1186 aaPredicted RBP12.34□□□□□ -0.43
UBE2D4-206ENST00000446008 LHX6Q9UPM6 363 aa12.34□□□□□ -0.43
UBE2D4-206ENST00000446008 LRRFIP2Q9Y608 721 aaKnown RBP12.34□□□□□ -0.43
UBE2D4-206ENST00000446008 POTEB3A0JP26 581 aa12.33□□□□□ -0.44
UBE2D4-206ENST00000446008 EYA2O00167 538 aa12.33□□□□□ -0.44
UBE2D4-206ENST00000446008 MAGEA10P43363 369 aaPredicted RBP12.33□□□□□ -0.44
UBE2D4-206ENST00000446008 RFX5P48382 616 aaPredicted RBP12.33□□□□□ -0.44
UBE2D4-206ENST00000446008 POTEBQ6S5H4 581 aa12.33□□□□□ -0.44
UBE2D4-206ENST00000446008 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.44
UBE2D4-206ENST00000446008 C11orf49Q9H6J7 331 aa12.33□□□□□ -0.44
UBE2D4-206ENST00000446008 PNMA3Q9UL41 463 aa12.33□□□□□ -0.44
UBE2D4-206ENST00000446008 OGDHLQ9ULD0 1010 aa12.33□□□□□ -0.44
UBE2D4-206ENST00000446008 DDX60LQ5H9U9 1706 aaKnown RBP12.33□□□□□ -0.44
UBE2D4-206ENST00000446008 DNAH12Q6ZR08 3092 aa12.33□□□□□ -0.44
UBE2D4-206ENST00000446008 GAKO14976 1311 aa12.33□□□□□ -0.44
UBE2D4-206ENST00000446008 PLXNB2O15031 1838 aa12.32□□□□□ -0.44
UBE2D4-206ENST00000446008 RFX7Q2KHR2 1363 aa12.32□□□□□ -0.44
UBE2D4-206ENST00000446008 DDTLA6NHG4 134 aaPredicted RBP12.32□□□□□ -0.44
UBE2D4-206ENST00000446008 TRIM75PA6NK02 468 aa12.32□□□□□ -0.44
UBE2D4-206ENST00000446008 SEMA3EO15041 775 aa12.32□□□□□ -0.44
UBE2D4-206ENST00000446008 GCLCP48506 637 aaPredicted RBP12.32□□□□□ -0.44
UBE2D4-206ENST00000446008 TREML2Q5T2D2 321 aa12.32□□□□□ -0.44
UBE2D4-206ENST00000446008 ATG9AQ7Z3C6 839 aa12.32□□□□□ -0.44
UBE2D4-206ENST00000446008 COL25A1Q9BXS0 654 aaPredicted RBP12.32□□□□□ -0.44
UBE2D4-206ENST00000446008 USP44Q9H0E7 712 aa12.32□□□□□ -0.44
UBE2D4-206ENST00000446008 GNL3LQ9NVN8 582 aaKnown RBP12.32□□□□□ -0.44
UBE2D4-206ENST00000446008 DENND2AQ9ULE3 1009 aa12.32□□□□□ -0.44
UBE2D4-206ENST00000446008 LOC285556D6RIA3 1793 aa12.31□□□□□ -0.44
UBE2D4-206ENST00000446008 SYN1P17600 705 aa12.31□□□□□ -0.44
UBE2D4-206ENST00000446008 ZSCAN29Q8IWY8 852 aaPredicted RBP12.31□□□□□ -0.44
UBE2D4-206ENST00000446008 ZGPATQ8N5A5 531 aaKnown RBP12.31□□□□□ -0.44
UBE2D4-206ENST00000446008 TBC1D2Q9BYX2 928 aa12.31□□□□□ -0.44
UBE2D4-206ENST00000446008 UBE2OQ9C0C9 1292 aaKnown RBP12.31□□□□□ -0.44
UBE2D4-206ENST00000446008 SALL2Q9Y467 1007 aaPredicted RBP12.31□□□□□ -0.44
UBE2D4-206ENST00000446008 VCANP13611 3396 aa12.3□□□□□ -0.44
UBE2D4-206ENST00000446008 DPYSL4O14531 572 aa12.3□□□□□ -0.44
UBE2D4-206ENST00000446008 SLURP2P0DP57 97 aa12.3□□□□□ -0.44
UBE2D4-206ENST00000446008 TRIM32Q13049 653 aa12.3□□□□□ -0.44
UBE2D4-206ENST00000446008 PABPC4Q13310 644 aaKnown RBP eCLIP12.3□□□□□ -0.44
UBE2D4-206ENST00000446008 ATP2B3Q16720 1220 aa12.3□□□□□ -0.44
UBE2D4-206ENST00000446008 MAP3K21Q5TCX8 1036 aa12.3□□□□□ -0.44
UBE2D4-206ENST00000446008 OSBPL5Q9H0X9 879 aaPredicted RBP12.3□□□□□ -0.44
UBE2D4-206ENST00000446008 DDX4Q9NQI0 724 aaKnown RBP12.3□□□□□ -0.44
UBE2D4-206ENST00000446008 SH3D19Q5HYK7 790 aa12.29□□□□□ -0.44
UBE2D4-206ENST00000446008 FAM109BQ6ICB4 259 aaPredicted RBP12.29□□□□□ -0.44
UBE2D4-206ENST00000446008 CCDC84Q86UT8 332 aaPredicted RBP12.29□□□□□ -0.44
UBE2D4-206ENST00000446008 SLF2Q8IX21 1173 aa12.29□□□□□ -0.44
UBE2D4-206ENST00000446008 MRPL50Q8N5N7 158 aaKnown RBP12.29□□□□□ -0.44
UBE2D4-206ENST00000446008 CEP126Q9P2H0 1117 aa12.29□□□□□ -0.44
UBE2D4-206ENST00000446008 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.29□□□□□ -0.44
UBE2D4-206ENST00000446008 MORF4L1Q9UBU8 362 aa12.29□□□□□ -0.44
UBE2D4-206ENST00000446008 ATAD5Q96QE3 1844 aa12.29□□□□□ -0.44
UBE2D4-206ENST00000446008 PFASO15067 1338 aa12.29□□□□□ -0.44
UBE2D4-206ENST00000446008 PTPRCP08575 1304 aa12.29□□□□□ -0.44
UBE2D4-206ENST00000446008 EYSQ5T1H1 3165 aa12.28□□□□□ -0.44
UBE2D4-206ENST00000446008 CIAO1O76071 339 aa12.28□□□□□ -0.44
UBE2D4-206ENST00000446008 COL6A1P12109 1028 aa12.28□□□□□ -0.44
UBE2D4-206ENST00000446008 XRCC5P13010 732 aaKnown RBP12.28□□□□□ -0.44
UBE2D4-206ENST00000446008 PHKA1P46020 1223 aa12.28□□□□□ -0.44
UBE2D4-206ENST00000446008 SPP2Q13103 211 aa12.28□□□□□ -0.44
UBE2D4-206ENST00000446008 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.28□□□□□ -0.44
UBE2D4-206ENST00000446008 ZNF280CQ8ND82 737 aa12.28□□□□□ -0.44
UBE2D4-206ENST00000446008 TRIB2Q92519 343 aa12.28□□□□□ -0.44
UBE2D4-206ENST00000446008 ASCC2Q9H1I8 757 aaPredicted RBP12.28□□□□□ -0.44
UBE2D4-206ENST00000446008 PDS5AQ29RF7 1337 aaKnown RBP12.28□□□□□ -0.44
UBE2D4-206ENST00000446008 MAP4K4O95819 1239 aaPredicted RBP12.27□□□□□ -0.45
UBE2D4-206ENST00000446008 BTDP43251 543 aa12.27□□□□□ -0.45
UBE2D4-206ENST00000446008 PICALMQ13492 652 aa12.27□□□□□ -0.45
UBE2D4-206ENST00000446008 TRMT44Q8IYL2 757 aaKnown RBP12.27□□□□□ -0.45
UBE2D4-206ENST00000446008 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.27□□□□□ -0.45
UBE2D4-206ENST00000446008 COL2A1P02458 1487 aaPredicted RBP12.27□□□□□ -0.45
UBE2D4-206ENST00000446008 PRUNE2Q8WUY3 3088 aa12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 GPR75-ASB3A0A0A6YYF3 556 aa12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 USP17L5A8MUK1 530 aa12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 CYP2B6P20813 491 aa12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 HOXA7P31268 230 aaPredicted RBP12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 CAP2P40123 477 aa12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 HMGCS2P54868 508 aa12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 RHBDL3P58872 404 aa12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 SPTY2D1Q68D10 685 aaPredicted RBP12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 CCDC102BQ68D86 513 aa12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 DZIP1Q86YF9 867 aaKnown RBP12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 GUCD1Q96NT3 240 aa12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 MROH7-TTC4A0A0A0MT08 1334 aa12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 SPTBN5Q9NRC6 3674 aaKnown RBP12.26□□□□□ -0.45
UBE2D4-206ENST00000446008 IL15P40933 162 aaPredicted RBP12.25□□□□□ -0.45
UBE2D4-206ENST00000446008 LRRC26Q2I0M4 334 aa12.25□□□□□ -0.45
UBE2D4-206ENST00000446008 SOCS4Q8WXH5 440 aa12.25□□□□□ -0.45
UBE2D4-206ENST00000446008 USP6NLQ92738 828 aa12.25□□□□□ -0.45
UBE2D4-206ENST00000446008 NUDT12Q9BQG2 462 aa12.25□□□□□ -0.45
UBE2D4-206ENST00000446008 SIL1Q9H173 461 aa12.25□□□□□ -0.45
UBE2D4-206ENST00000446008 AS3MTQ9HBK9 375 aa12.25□□□□□ -0.45
UBE2D4-206ENST00000446008 ABCF2Q9UG63 623 aa12.25□□□□□ -0.45
UBE2D4-206ENST00000446008 FAM196BA6NMK8 535 aa12.24□□□□□ -0.45
UBE2D4-206ENST00000446008 ADORA1P30542 326 aa12.24□□□□□ -0.45
UBE2D4-206ENST00000446008 CACNB2Q08289 660 aaPredicted RBP12.24□□□□□ -0.45
UBE2D4-206ENST00000446008 RASGRF1Q13972 1273 aa12.24□□□□□ -0.45
UBE2D4-206ENST00000446008 RRP1BQ14684 758 aaKnown RBP12.24□□□□□ -0.45
UBE2D4-206ENST00000446008 ZNF687Q8N1G0 1237 aa12.24□□□□□ -0.45
UBE2D4-206ENST00000446008 WDR18Q9BV38 432 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms