RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 EHD4Q9H223 541 aa22.78■■□□□ 1.24
COMMD1-204ENST00000445644 ZBTB21Q9ULJ3 1066 aa22.78■■□□□ 1.24
COMMD1-204ENST00000445644 ASNSP08243 561 aa22.77■■□□□ 1.24
COMMD1-204ENST00000445644 ARMC5Q96C12 935 aa22.77■■□□□ 1.24
COMMD1-204ENST00000445644 TRIM34Q9BYJ4 488 aa22.77■■□□□ 1.24
COMMD1-204ENST00000445644 ARMT1Q9H993 441 aa22.77■■□□□ 1.24
COMMD1-204ENST00000445644 MKI67P46013 3256 aaKnown RBP22.76■■□□□ 1.23
COMMD1-204ENST00000445644 KIF22Q14807 665 aa22.76■■□□□ 1.23
COMMD1-204ENST00000445644 CRNKL1Q9BZJ0 848 aaKnown RBP22.76■■□□□ 1.23
COMMD1-204ENST00000445644 AS3MTQ9HBK9 375 aa22.76■■□□□ 1.23
COMMD1-204ENST00000445644 ECHDC1Q9NTX5 307 aa22.76■■□□□ 1.23
COMMD1-204ENST00000445644 SERPINB13Q9UIV8 391 aa22.76■■□□□ 1.23
COMMD1-204ENST00000445644 PRKAB2O43741 272 aa22.75■■□□□ 1.23
COMMD1-204ENST00000445644 SHMT1P34896 483 aa22.75■■□□□ 1.23
COMMD1-204ENST00000445644 PSMC4P43686 418 aa22.75■■□□□ 1.23
COMMD1-204ENST00000445644 GABPAQ06546 454 aa22.75■■□□□ 1.23
COMMD1-204ENST00000445644 MTMR2Q13614 643 aa22.75■■□□□ 1.23
COMMD1-204ENST00000445644 DCP1AQ9NPI6 582 aaPredicted RBP22.75■■□□□ 1.23
COMMD1-204ENST00000445644 POTEFA5A3E0 1075 aa22.74■■□□□ 1.23
COMMD1-204ENST00000445644 MBD4O95243 580 aa22.74■■□□□ 1.23
COMMD1-204ENST00000445644 GH2P01242 217 aa22.74■■□□□ 1.23
COMMD1-204ENST00000445644 OSBPP22059 807 aa22.74■■□□□ 1.23
COMMD1-204ENST00000445644 BACE1P56817 501 aa22.74■■□□□ 1.23
COMMD1-204ENST00000445644 ARHGEF6Q15052 776 aa22.74■■□□□ 1.23
COMMD1-204ENST00000445644 TTC6Q86TZ1 520 aa22.74■■□□□ 1.23
COMMD1-204ENST00000445644 GINM1Q9NU53 330 aa22.74■■□□□ 1.23
COMMD1-204ENST00000445644 DOCK3Q8IZD9 2030 aa22.74■■□□□ 1.23
COMMD1-204ENST00000445644 PLXNB2O15031 1838 aa22.73■■□□□ 1.23
COMMD1-204ENST00000445644 GNRH1P01148 92 aa22.73■■□□□ 1.23
COMMD1-204ENST00000445644 CYP2D6P10635 497 aa22.73■■□□□ 1.23
COMMD1-204ENST00000445644 UBE3CQ15386 1083 aa22.73■■□□□ 1.23
COMMD1-204ENST00000445644 OTUD7AQ8TE49 926 aaPredicted RBP22.73■■□□□ 1.23
COMMD1-204ENST00000445644 ZNF333Q96JL9 665 aa22.73■■□□□ 1.23
COMMD1-204ENST00000445644 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.73■■□□□ 1.23
COMMD1-204ENST00000445644 MCM9Q9NXL9 1143 aa22.73■■□□□ 1.23
COMMD1-204ENST00000445644 SMIM22K7EJ46 135 aa22.72■■□□□ 1.23
COMMD1-204ENST00000445644 PUS7LQ9H0K6 701 aaKnown RBP22.72■■□□□ 1.23
COMMD1-204ENST00000445644 SRRDQ9UH36 339 aa22.72■■□□□ 1.23
COMMD1-204ENST00000445644 FMNL1O95466 1100 aaPredicted RBP22.71■■□□□ 1.23
COMMD1-204ENST00000445644 POLR3DP05423 398 aaPredicted RBP22.71■■□□□ 1.23
COMMD1-204ENST00000445644 GUCY1A2P33402 732 aa22.71■■□□□ 1.23
COMMD1-204ENST00000445644 SLC9C1Q4G0N8 1177 aa22.71■■□□□ 1.23
COMMD1-204ENST00000445644 SMCR8Q8TEV9 937 aaPredicted RBP22.71■■□□□ 1.23
COMMD1-204ENST00000445644 SH3TC2Q8TF17 1288 aa22.71■■□□□ 1.23
COMMD1-204ENST00000445644 ASCC2Q9H1I8 757 aaPredicted RBP22.71■■□□□ 1.23
COMMD1-204ENST00000445644 USP17L10C9JJH3 530 aa22.7■■□□□ 1.22
COMMD1-204ENST00000445644 PRMT2P55345 433 aa22.7■■□□□ 1.22
COMMD1-204ENST00000445644 CERKLQ49MI3 558 aaPredicted RBP22.7■■□□□ 1.22
COMMD1-204ENST00000445644 ANKRD13CQ8N6S4 541 aa22.7■■□□□ 1.22
COMMD1-204ENST00000445644 PI4K2BQ8TCG2 481 aa22.7■■□□□ 1.22
COMMD1-204ENST00000445644 EMILIN3Q9NT22 766 aa22.7■■□□□ 1.22
COMMD1-204ENST00000445644 PNMA3Q9UL41 463 aa22.7■■□□□ 1.22
COMMD1-204ENST00000445644 GABRQQ9UN88 632 aa22.7■■□□□ 1.22
COMMD1-204ENST00000445644 MYPNQ86TC9 1320 aa22.7■■□□□ 1.22
COMMD1-204ENST00000445644 SALL3Q9BXA9 1300 aa22.7■■□□□ 1.22
COMMD1-204ENST00000445644 PRKCZQ05513 592 aa22.69■■□□□ 1.22
COMMD1-204ENST00000445644 KBTBD3Q8NAB2 608 aa22.69■■□□□ 1.22
COMMD1-204ENST00000445644 SLC44A5Q8NCS7 719 aa22.69■■□□□ 1.22
COMMD1-204ENST00000445644 CYP2D7A0A087X1C5 515 aa22.68■■□□□ 1.22
COMMD1-204ENST00000445644 C19orf81C9J6K1 198 aa22.68■■□□□ 1.22
COMMD1-204ENST00000445644 FCGRTP55899 365 aa22.68■■□□□ 1.22
COMMD1-204ENST00000445644 FAM110CQ1W6H9 321 aa22.68■■□□□ 1.22
COMMD1-204ENST00000445644 ABCB5Q2M3G0 1257 aa22.68■■□□□ 1.22
COMMD1-204ENST00000445644 ATP8A2Q9NTI2 1148 aa22.68■■□□□ 1.22
COMMD1-204ENST00000445644 GREB1LQ9C091 1923 aaPredicted RBP22.68■■□□□ 1.22
COMMD1-204ENST00000445644 TTC41PQ6P2S7 1318 aa22.67■■□□□ 1.22
COMMD1-204ENST00000445644 PEX10O60683 326 aa22.67■■□□□ 1.22
COMMD1-204ENST00000445644 HOXA7P31268 230 aaPredicted RBP22.67■■□□□ 1.22
COMMD1-204ENST00000445644 PABPC4Q13310 644 aaKnown RBP eCLIP22.67■■□□□ 1.227e-6■■□□□ 14.2
COMMD1-204ENST00000445644 RAB3GAP1Q15042 981 aa22.67■■□□□ 1.22
COMMD1-204ENST00000445644 ZSCAN25Q6NSZ9 544 aa22.67■■□□□ 1.22
COMMD1-204ENST00000445644 ACER1Q8TDN7 264 aa22.67■■□□□ 1.22
COMMD1-204ENST00000445644 DYNLL2Q96FJ2 89 aa22.67■■□□□ 1.22
COMMD1-204ENST00000445644 GPATCH3Q96I76 525 aa22.67■■□□□ 1.22
COMMD1-204ENST00000445644 TMOD4Q9NZQ9 345 aa22.67■■□□□ 1.22
COMMD1-204ENST00000445644 RLFQ13129 1914 aa22.67■■□□□ 1.22
COMMD1-204ENST00000445644 PARP14Q460N5 1801 aa22.66■■□□□ 1.22
COMMD1-204ENST00000445644 ZYXQ15942 572 aaKnown RBP22.66■■□□□ 1.22
COMMD1-204ENST00000445644 POTEEQ6S8J3 1075 aa22.66■■□□□ 1.22
COMMD1-204ENST00000445644 OSBP2Q969R2 916 aa22.66■■□□□ 1.22
COMMD1-204ENST00000445644 C12orf42Q96LP6 360 aa22.66■■□□□ 1.22
COMMD1-204ENST00000445644 SLC4A4Q9Y6R1 1079 aa22.66■■□□□ 1.22
COMMD1-204ENST00000445644 HOXD10P28358 340 aa22.65■■□□□ 1.22
COMMD1-204ENST00000445644 HDAC1Q13547 482 aaPredicted RBP22.65■■□□□ 1.22
COMMD1-204ENST00000445644 SEPT2Q15019 361 aa22.65■■□□□ 1.22
COMMD1-204ENST00000445644 C12orf60Q5U649 245 aa22.65■■□□□ 1.22
COMMD1-204ENST00000445644 USP17L2Q6R6M4 530 aa22.65■■□□□ 1.22
COMMD1-204ENST00000445644 NBPF11Q86T75 865 aa22.65■■□□□ 1.22
COMMD1-204ENST00000445644 STRBPQ96SI9 672 aaKnown RBP22.65■■□□□ 1.22
COMMD1-204ENST00000445644 P2RX7Q99572 595 aaKnown RBP22.65■■□□□ 1.22
COMMD1-204ENST00000445644 USP17L12C9JPN9 530 aa22.64■■□□□ 1.21
COMMD1-204ENST00000445644 USP17L21D6R901 530 aa22.64■■□□□ 1.21
COMMD1-204ENST00000445644 MYCP01106 439 aaPredicted RBP22.64■■□□□ 1.21
COMMD1-204ENST00000445644 EN2P19622 333 aaPredicted RBP22.64■■□□□ 1.21
COMMD1-204ENST00000445644 GCLCP48506 637 aaPredicted RBP22.64■■□□□ 1.21
COMMD1-204ENST00000445644 RAET1EQ8TD07 263 aa22.64■■□□□ 1.21
COMMD1-204ENST00000445644 TXNRD2Q9NNW7 524 aa22.64■■□□□ 1.21
COMMD1-204ENST00000445644 MORF4L1Q9UBU8 362 aa22.64■■□□□ 1.21
COMMD1-204ENST00000445644 A0A0G2JMZ2 1700 aa22.63■■□□□ 1.21
COMMD1-204ENST00000445644 A0A1W2PRG0 241 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms