RNA–Protein interactions for RNA: ENST00000444869.5

COMMD3-202, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-202ENST00000444869 WDR18Q9BV38 432 aa17.02■□□□□ 0.32
COMMD3-202ENST00000444869 CRNKL1Q9BZJ0 848 aaKnown RBP17.02■□□□□ 0.32
COMMD3-202ENST00000444869 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.02■□□□□ 0.32
COMMD3-202ENST00000444869 AGTPBP1Q9UPW5 1226 aa17.02■□□□□ 0.32
COMMD3-202ENST00000444869 CYP2C8P10632 490 aa17.01■□□□□ 0.31
COMMD3-202ENST00000444869 BCRP11274 1271 aa17.01■□□□□ 0.31
COMMD3-202ENST00000444869 UBE3CQ15386 1083 aa17.01■□□□□ 0.31
COMMD3-202ENST00000444869 SHROOM1Q2M3G4 852 aaPredicted RBP17.01■□□□□ 0.31
COMMD3-202ENST00000444869 TRIM34Q9BYJ4 488 aa17.01■□□□□ 0.31
COMMD3-202ENST00000444869 AS3MTQ9HBK9 375 aa17.01■□□□□ 0.31
COMMD3-202ENST00000444869 CPA4Q9UI42 421 aa17.01■□□□□ 0.31
COMMD3-202ENST00000444869 SERPINB13Q9UIV8 391 aa17.01■□□□□ 0.31
COMMD3-202ENST00000444869 ZBTB21Q9ULJ3 1066 aa17.01■□□□□ 0.31
COMMD3-202ENST00000444869 GNRH1P01148 92 aa17■□□□□ 0.31
COMMD3-202ENST00000444869 GABPAQ06546 454 aa17■□□□□ 0.31
COMMD3-202ENST00000444869 SLC4A8Q2Y0W8 1093 aa17■□□□□ 0.31
COMMD3-202ENST00000444869 SLFNL1Q499Z3 407 aa17■□□□□ 0.31
COMMD3-202ENST00000444869 GPATCH3Q96I76 525 aa17■□□□□ 0.31
COMMD3-202ENST00000444869 ARHGAP39Q9C0H5 1083 aa17■□□□□ 0.31
COMMD3-202ENST00000444869 DCP1AQ9NPI6 582 aaPredicted RBP17■□□□□ 0.31
COMMD3-202ENST00000444869 TTC41PQ6P2S7 1318 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 GDF11O95390 407 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 CHGBP05060 677 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 CTGFP29279 349 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 PLCD1P51178 756 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 HMGCS2P54868 508 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 SOX10P56693 466 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 AAMPQ13685 434 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 KIF22Q14807 665 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 TREML2Q5T2D2 321 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 ZSCAN25Q6NSZ9 544 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 KBTBD3Q8NAB2 608 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 SDR42E1Q8WUS8 393 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 ARMT1Q9H993 441 aa16.99■□□□□ 0.31
COMMD3-202ENST00000444869 SALL3Q9BXA9 1300 aa16.98■□□□□ 0.31
COMMD3-202ENST00000444869 MBD4O95243 580 aa16.98■□□□□ 0.31
COMMD3-202ENST00000444869 SHMT1P34896 483 aa16.98■□□□□ 0.31
COMMD3-202ENST00000444869 BACE1P56817 501 aa16.98■□□□□ 0.31
COMMD3-202ENST00000444869 HDAC1Q13547 482 aaPredicted RBP16.98■□□□□ 0.31
COMMD3-202ENST00000444869 TSHZ3Q63HK5 1081 aa16.98■□□□□ 0.31
COMMD3-202ENST00000444869 ARMC5Q96C12 935 aa16.98■□□□□ 0.31
COMMD3-202ENST00000444869 MCM9Q9NXL9 1143 aa16.98■□□□□ 0.31
COMMD3-202ENST00000444869 TAOK2Q9UL54 1235 aa16.98■□□□□ 0.31
COMMD3-202ENST00000444869 PITPNM1O00562 1244 aa16.97■□□□□ 0.31
COMMD3-202ENST00000444869 PRMT2P55345 433 aa16.97■□□□□ 0.31
COMMD3-202ENST00000444869 EVX2Q03828 476 aa16.97■□□□□ 0.31
COMMD3-202ENST00000444869 MTMR2Q13614 643 aa16.97■□□□□ 0.31
COMMD3-202ENST00000444869 PI4K2BQ8TCG2 481 aa16.97■□□□□ 0.31
COMMD3-202ENST00000444869 TRIM47Q96LD4 638 aa16.97■□□□□ 0.31
COMMD3-202ENST00000444869 ATP8A2Q9NTI2 1148 aa16.97■□□□□ 0.31
COMMD3-202ENST00000444869 PNMA3Q9UL41 463 aa16.97■□□□□ 0.31
COMMD3-202ENST00000444869 PTCH2Q9Y6C5 1203 aa16.97■□□□□ 0.31
COMMD3-202ENST00000444869 TNRC18O15417 2968 aaPredicted RBP16.96■□□□□ 0.31
COMMD3-202ENST00000444869 C19orf81C9J6K1 198 aa16.96■□□□□ 0.31
COMMD3-202ENST00000444869 PRKAB2O43741 272 aa16.96■□□□□ 0.31
COMMD3-202ENST00000444869 GH2P01242 217 aa16.96■□□□□ 0.31
COMMD3-202ENST00000444869 POLR3DP05423 398 aaPredicted RBP16.96■□□□□ 0.31
COMMD3-202ENST00000444869 PSMC4P43686 418 aa16.96■□□□□ 0.31
COMMD3-202ENST00000444869 MLLT1Q03111 559 aaPredicted RBP16.96■□□□□ 0.31
COMMD3-202ENST00000444869 OTUD7AQ8TE49 926 aaPredicted RBP16.96■□□□□ 0.31
COMMD3-202ENST00000444869 PUS7LQ9H0K6 701 aaKnown RBP16.96■□□□□ 0.31
COMMD3-202ENST00000444869 USP17L10C9JJH3 530 aa16.95■□□□□ 0.3
COMMD3-202ENST00000444869 PABPC4Q13310 644 aaKnown RBP eCLIP16.95■□□□□ 0.32e-13■□□□□ 8.7
COMMD3-202ENST00000444869 CERKLQ49MI3 558 aaPredicted RBP16.95■□□□□ 0.3
COMMD3-202ENST00000444869 SMCR8Q8TEV9 937 aaPredicted RBP16.95■□□□□ 0.3
COMMD3-202ENST00000444869 GCC1Q96CN9 775 aa16.95■□□□□ 0.3
COMMD3-202ENST00000444869 CENPFP49454 3210 aa16.95■□□□□ 0.3
COMMD3-202ENST00000444869 ERC2O15083 957 aa16.94■□□□□ 0.3
COMMD3-202ENST00000444869 GLRX3O76003 335 aaKnown RBP16.94■□□□□ 0.3
COMMD3-202ENST00000444869 ZFYP08048 801 aaPredicted RBP16.94■□□□□ 0.3
COMMD3-202ENST00000444869 CYP2D6P10635 497 aa16.94■□□□□ 0.3
COMMD3-202ENST00000444869 MX1P20591 662 aa16.94■□□□□ 0.3
COMMD3-202ENST00000444869 OSBPP22059 807 aa16.94■□□□□ 0.3
COMMD3-202ENST00000444869 HOXA7P31268 230 aaPredicted RBP16.94■□□□□ 0.3
COMMD3-202ENST00000444869 FAM110CQ1W6H9 321 aa16.94■□□□□ 0.3
COMMD3-202ENST00000444869 ABCB5Q2M3G0 1257 aa16.94■□□□□ 0.3
COMMD3-202ENST00000444869 APPBP2Q92624 585 aa16.94■□□□□ 0.3
COMMD3-202ENST00000444869 ZNF333Q96JL9 665 aa16.94■□□□□ 0.3
COMMD3-202ENST00000444869 C12orf42Q96LP6 360 aa16.94■□□□□ 0.3
COMMD3-202ENST00000444869 ASCC2Q9H1I8 757 aaPredicted RBP16.94■□□□□ 0.3
COMMD3-202ENST00000444869 SRRDQ9UH36 339 aa16.94■□□□□ 0.3
COMMD3-202ENST00000444869 GREB1LQ9C091 1923 aaPredicted RBP16.94■□□□□ 0.3
COMMD3-202ENST00000444869 GUCY1A2P33402 732 aa16.93■□□□□ 0.3
COMMD3-202ENST00000444869 GCLCP48506 637 aaPredicted RBP16.93■□□□□ 0.3
COMMD3-202ENST00000444869 FXR2P51116 673 aaKnown RBP eCLIP16.93■□□□□ 0.3
COMMD3-202ENST00000444869 FCGRTP55899 365 aa16.93■□□□□ 0.3
COMMD3-202ENST00000444869 C12orf60Q5U649 245 aa16.93■□□□□ 0.3
COMMD3-202ENST00000444869 OSBP2Q969R2 916 aa16.93■□□□□ 0.3
COMMD3-202ENST00000444869 STRBPQ96SI9 672 aaKnown RBP16.93■□□□□ 0.3
COMMD3-202ENST00000444869 EMILIN3Q9NT22 766 aa16.93■□□□□ 0.3
COMMD3-202ENST00000444869 TMOD4Q9NZQ9 345 aa16.93■□□□□ 0.3
COMMD3-202ENST00000444869 SWAP70Q9UH65 585 aa16.93■□□□□ 0.3
COMMD3-202ENST00000444869 DOCK3Q8IZD9 2030 aa16.92■□□□□ 0.3
COMMD3-202ENST00000444869 RNF113AO15541 343 aaKnown RBP16.92■□□□□ 0.3
COMMD3-202ENST00000444869 FMNL1O95466 1100 aaPredicted RBP16.92■□□□□ 0.3
COMMD3-202ENST00000444869 HOXD10P28358 340 aa16.92■□□□□ 0.3
COMMD3-202ENST00000444869 SLC9C1Q4G0N8 1177 aa16.92■□□□□ 0.3
COMMD3-202ENST00000444869 SLC44A5Q8NCS7 719 aa16.92■□□□□ 0.3
COMMD3-202ENST00000444869 KIAA1683Q9H0B3 1180 aa16.92■□□□□ 0.3
COMMD3-202ENST00000444869 SLC4A4Q9Y6R1 1079 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms