RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 CTAGE5O15320 804 aa18.16■□□□□ 0.5
SNX13-204ENST00000444712 POLR3DP05423 398 aaPredicted RBP18.16■□□□□ 0.5
SNX13-204ENST00000444712 ADALQ6DHV7 355 aa18.16■□□□□ 0.5
SNX13-204ENST00000444712 TEX11Q8IYF3 940 aa18.16■□□□□ 0.5
SNX13-204ENST00000444712 LINC00301Q8NCQ3 95 aa18.16■□□□□ 0.5
SNX13-204ENST00000444712 CTCFLQ8NI51 663 aaPredicted RBP18.16■□□□□ 0.5
SNX13-204ENST00000444712 G3V3G9 751 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 CYP2D6P10635 497 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 GTF2IP78347 998 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 DCAF8Q5TAQ9 597 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 ANO1Q5XXA6 986 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 RBM43Q6ZSC3 357 aaKnown RBP18.15■□□□□ 0.5
SNX13-204ENST00000444712 DGKHQ86XP1 1220 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 C2CD5Q86YS7 1000 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 CCAR1Q8IX12 1150 aaKnown RBP18.15■□□□□ 0.5
SNX13-204ENST00000444712 JMYQ8N9B5 988 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 FUCA2Q9BTY2 467 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 MKNK2Q9HBH9 465 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 KIF28PB7ZC32 967 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 SMIM22K7EJ46 135 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 RIMBP2O15034 1052 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 MMP1P03956 469 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 TROAPQ12815 778 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 MSL1Q68DK7 614 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 ZNF622Q969S3 477 aaKnown RBP eCLIP18.15■□□□□ 0.5
SNX13-204ENST00000444712 AIFM3Q96NN9 605 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 MAP3K14Q99558 947 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 TCP11L1Q9NUJ3 509 aa18.15■□□□□ 0.5
SNX13-204ENST00000444712 SPTLC2O15270 562 aa18.14■□□□□ 0.49
SNX13-204ENST00000444712 PRPF3O43395 683 aaKnown RBP18.14■□□□□ 0.49
SNX13-204ENST00000444712 KIF5BP33176 963 aa18.14■□□□□ 0.49
SNX13-204ENST00000444712 ANKS1AQ92625 1134 aa18.14■□□□□ 0.49
SNX13-204ENST00000444712 CAMKK2Q96RR4 588 aa18.14■□□□□ 0.49
SNX13-204ENST00000444712 FTOQ9C0B1 505 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNX13-204ENST00000444712 FOXP1Q9H334 677 aaPredicted RBP18.14■□□□□ 0.49
SNX13-204ENST00000444712 MYH8P13535 1937 aa18.14■□□□□ 0.49
SNX13-204ENST00000444712 NR1I2O75469 434 aa18.13■□□□□ 0.49
SNX13-204ENST00000444712 FAM160A1Q05DH4 1040 aa18.13■□□□□ 0.49
SNX13-204ENST00000444712 ZNF444Q8N0Y2 327 aaPredicted RBP18.13■□□□□ 0.49
SNX13-204ENST00000444712 MRPS27Q92552 414 aaKnown RBP18.13■□□□□ 0.49
SNX13-204ENST00000444712 CNKSR1Q969H4 720 aa18.13■□□□□ 0.49
SNX13-204ENST00000444712 GJB4Q9NTQ9 266 aa18.13■□□□□ 0.49
SNX13-204ENST00000444712 KINO60870 393 aaKnown RBP18.13■□□□□ 0.49
SNX13-204ENST00000444712 TFAP4Q01664 338 aa18.13■□□□□ 0.49
SNX13-204ENST00000444712 FAM47AQ5JRC9 791 aa18.13■□□□□ 0.49
SNX13-204ENST00000444712 PODNQ7Z5L7 613 aa18.13■□□□□ 0.49
SNX13-204ENST00000444712 MAPKAPK5Q8IW41 473 aa18.13■□□□□ 0.49
SNX13-204ENST00000444712 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.13■□□□□ 0.49
SNX13-204ENST00000444712 KAT14Q9H8E8 782 aa18.13■□□□□ 0.49
SNX13-204ENST00000444712 RGS17Q9UGC6 210 aaPredicted RBP18.13■□□□□ 0.49
SNX13-204ENST00000444712 PCDHA7Q9UN72 937 aa18.13■□□□□ 0.49
SNX13-204ENST00000444712 CLIC4Q9Y696 253 aa18.13■□□□□ 0.49
SNX13-204ENST00000444712 FLT1P17948 1338 aa18.12■□□□□ 0.49
SNX13-204ENST00000444712 PPP6R2O75170 966 aa18.12■□□□□ 0.49
SNX13-204ENST00000444712 POTEAQ6S8J7 498 aa18.12■□□□□ 0.49
SNX13-204ENST00000444712 TMTC3Q6ZXV5 915 aa18.12■□□□□ 0.49
SNX13-204ENST00000444712 RNF214Q8ND24 703 aa18.12■□□□□ 0.49
SNX13-204ENST00000444712 CAVIN2O95810 425 aa18.11■□□□□ 0.49
SNX13-204ENST00000444712 TSPY3P0CV98 308 aa18.11■□□□□ 0.49
SNX13-204ENST00000444712 TSPY8P0CW00 308 aa18.11■□□□□ 0.49
SNX13-204ENST00000444712 RHBDL3P58872 404 aa18.11■□□□□ 0.49
SNX13-204ENST00000444712 FKBP1AP62942 108 aaKnown RBP18.11■□□□□ 0.49
SNX13-204ENST00000444712 SLC39A14Q15043 492 aa18.11■□□□□ 0.49
SNX13-204ENST00000444712 EZH2Q15910 746 aaKnown RBP18.11■□□□□ 0.49
SNX13-204ENST00000444712 NOSTRINQ8IVI9 506 aa18.11■□□□□ 0.49
SNX13-204ENST00000444712 FSIP1Q8NA03 581 aa18.11■□□□□ 0.49
SNX13-204ENST00000444712 SLX4Q8IY92 1834 aa18.11■□□□□ 0.49
SNX13-204ENST00000444712 CC2D2BQ6DHV5 1058 aa18.11■□□□□ 0.49
SNX13-204ENST00000444712 C16orf86Q6ZW13 317 aa18.11■□□□□ 0.49
SNX13-204ENST00000444712 DIS3L2Q8IYB7 885 aaKnown RBP18.11■□□□□ 0.49
SNX13-204ENST00000444712 FBXW7Q969H0 707 aa18.11■□□□□ 0.49
SNX13-204ENST00000444712 PDLIM2Q96JY6 352 aa18.11■□□□□ 0.49
SNX13-204ENST00000444712 DAGLAQ9Y4D2 1042 aa18.11■□□□□ 0.49
SNX13-204ENST00000444712 GNAQP50148 359 aa18.1■□□□□ 0.49
SNX13-204ENST00000444712 FUT2Q10981 343 aa18.1■□□□□ 0.49
SNX13-204ENST00000444712 RILPL1Q5EBL4 403 aa18.1■□□□□ 0.49
SNX13-204ENST00000444712 SASS6Q6UVJ0 657 aa18.1■□□□□ 0.49
SNX13-204ENST00000444712 ANO8Q9HCE9 1232 aaPredicted RBP18.1■□□□□ 0.49
SNX13-204ENST00000444712 BRMS1Q9HCU9 246 aa18.1■□□□□ 0.49
SNX13-204ENST00000444712 GUCY1A2P33402 732 aa18.1■□□□□ 0.49
SNX13-204ENST00000444712 EVX2Q03828 476 aa18.1■□□□□ 0.49
SNX13-204ENST00000444712 EN1Q05925 392 aaPredicted RBP18.1■□□□□ 0.49
SNX13-204ENST00000444712 SF3B2Q13435 895 aaKnown RBP18.1■□□□□ 0.49
SNX13-204ENST00000444712 CAMK4Q16566 473 aa18.1■□□□□ 0.49
SNX13-204ENST00000444712 HHIPL2Q6UWX4 724 aa18.1■□□□□ 0.49
SNX13-204ENST00000444712 FAM43AQ8N2R8 423 aa18.1■□□□□ 0.49
SNX13-204ENST00000444712 TYRO3Q06418 890 aa18.09■□□□□ 0.49
SNX13-204ENST00000444712 GRIPAP1Q4V328 841 aa18.09■□□□□ 0.49
SNX13-204ENST00000444712 HS1BP3Q53T59 392 aa18.09■□□□□ 0.49
SNX13-204ENST00000444712 RCSD1Q6JBY9 416 aa18.09■□□□□ 0.49
SNX13-204ENST00000444712 CCDC82Q8N4S0 544 aa18.09■□□□□ 0.49
SNX13-204ENST00000444712 ENGASEQ8NFI3 743 aa18.09■□□□□ 0.49
SNX13-204ENST00000444712 DYNLL2Q96FJ2 89 aa18.09■□□□□ 0.49
SNX13-204ENST00000444712 SAP30BPQ9UHR5 308 aaKnown RBP18.09■□□□□ 0.49
SNX13-204ENST00000444712 TTF2Q9UNY4 1162 aaKnown RBP18.09■□□□□ 0.49
SNX13-204ENST00000444712 CNTNAP5Q8WYK1 1306 aa18.09■□□□□ 0.49
SNX13-204ENST00000444712 BAG6P46379 1132 aa18.08■□□□□ 0.49
SNX13-204ENST00000444712 SUPT20HQ8NEM7 779 aa18.08■□□□□ 0.49
SNX13-204ENST00000444712 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.08■□□□□ 0.49
SNX13-204ENST00000444712 CEP131Q9UPN4 1083 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms