RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 FLT3LGP49771 235 aa28.75■■■□□ 2.19
TMEM238-201ENST00000444469 BACE1P56817 501 aa28.75■■■□□ 2.19
TMEM238-201ENST00000444469 MTFR1Q15390 333 aa28.75■■■□□ 2.19
TMEM238-201ENST00000444469 DNAJC2Q99543 621 aaKnown RBP28.75■■■□□ 2.19
TMEM238-201ENST00000444469 RNF208Q9H0X6 261 aa28.75■■■□□ 2.19
TMEM238-201ENST00000444469 ZBTB21Q9ULJ3 1066 aa28.75■■■□□ 2.19
TMEM238-201ENST00000444469 MYO5AQ9Y4I1 1855 aaKnown RBP28.74■■■□□ 2.19
TMEM238-201ENST00000444469 FOCADQ5VW36 1801 aa28.74■■■□□ 2.19
TMEM238-201ENST00000444469 C19orf81C9J6K1 198 aa28.74■■■□□ 2.19
TMEM238-201ENST00000444469 USP17L10C9JJH3 530 aa28.74■■■□□ 2.19
TMEM238-201ENST00000444469 METTL16Q86W50 562 aaKnown RBP28.74■■■□□ 2.19
TMEM238-201ENST00000444469 ASCC2Q9H1I8 757 aaPredicted RBP28.74■■■□□ 2.19
TMEM238-201ENST00000444469 DNAJC18Q9H819 358 aa28.74■■■□□ 2.19
TMEM238-201ENST00000444469 ZBTB40Q9NUA8 1239 aa28.74■■■□□ 2.19
TMEM238-201ENST00000444469 LOC285556D6RIA3 1793 aa28.74■■■□□ 2.19
TMEM238-201ENST00000444469 MAGEB6P1A0A0J9YX57 407 aa28.73■■■□□ 2.19
TMEM238-201ENST00000444469 MGAMO43451 1857 aa28.73■■■□□ 2.19
TMEM238-201ENST00000444469 SERPINB13Q9UIV8 391 aa28.73■■■□□ 2.19
TMEM238-201ENST00000444469 SLC9C2Q5TAH2 1124 aa28.72■■■□□ 2.19
TMEM238-201ENST00000444469 CDK5RAP2Q96SN8 1893 aa28.72■■■□□ 2.19
TMEM238-201ENST00000444469 IRF5Q13568 498 aa28.71■■■□□ 2.19
TMEM238-201ENST00000444469 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.71■■■□□ 2.19
TMEM238-201ENST00000444469 FEZ1Q99689 392 aa28.71■■■□□ 2.19
TMEM238-201ENST00000444469 CRNKL1Q9BZJ0 848 aaKnown RBP28.71■■■□□ 2.19
TMEM238-201ENST00000444469 SIPA1L1O43166 1804 aa28.71■■■□□ 2.19
TMEM238-201ENST00000444469 GOLIM4O00461 696 aa28.7■■■□□ 2.18
TMEM238-201ENST00000444469 POLR3DP05423 398 aaPredicted RBP28.7■■■□□ 2.18
TMEM238-201ENST00000444469 GJB1P08034 283 aa28.7■■■□□ 2.18
TMEM238-201ENST00000444469 PXYLP1Q8TE99 480 aa28.7■■■□□ 2.18
TMEM238-201ENST00000444469 EHD4Q9H223 541 aa28.7■■■□□ 2.18
TMEM238-201ENST00000444469 GH2P01242 217 aa28.69■■■□□ 2.18
TMEM238-201ENST00000444469 ELNP15502 786 aa28.69■■■□□ 2.18
TMEM238-201ENST00000444469 PDE6AP16499 860 aa28.69■■■□□ 2.18
TMEM238-201ENST00000444469 GJA8P48165 433 aa28.69■■■□□ 2.18
TMEM238-201ENST00000444469 CABP5Q9NP86 173 aa28.69■■■□□ 2.18
TMEM238-201ENST00000444469 INHAP05111 366 aa28.68■■■□□ 2.18
TMEM238-201ENST00000444469 USP17L2Q6R6M4 530 aa28.68■■■□□ 2.18
TMEM238-201ENST00000444469 CCAR1Q8IX12 1150 aaKnown RBP28.68■■■□□ 2.18
TMEM238-201ENST00000444469 MYH1P12882 1939 aa28.67■■■□□ 2.18
TMEM238-201ENST00000444469 HOXA7P31268 230 aaPredicted RBP28.67■■■□□ 2.18
TMEM238-201ENST00000444469 JAG1P78504 1218 aa28.67■■■□□ 2.18
TMEM238-201ENST00000444469 CERKLQ49MI3 558 aaPredicted RBP28.67■■■□□ 2.18
TMEM238-201ENST00000444469 SIRT2Q8IXJ6 389 aa28.67■■■□□ 2.18
TMEM238-201ENST00000444469 ZNF532Q9HCE3 1301 aa28.67■■■□□ 2.18
TMEM238-201ENST00000444469 PDE3AQ14432 1141 aa28.66■■■□□ 2.18
TMEM238-201ENST00000444469 RAB3GAP1Q15042 981 aa28.66■■■□□ 2.18
TMEM238-201ENST00000444469 ABCB5Q2M3G0 1257 aa28.66■■■□□ 2.18
TMEM238-201ENST00000444469 SHROOM1Q2M3G4 852 aaPredicted RBP28.66■■■□□ 2.18
TMEM238-201ENST00000444469 GTF3C2Q8WUA4 911 aaPredicted RBP28.66■■■□□ 2.18
TMEM238-201ENST00000444469 RIOK1Q9BRS2 568 aaKnown RBP28.66■■■□□ 2.18
TMEM238-201ENST00000444469 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.66■■■□□ 2.18
TMEM238-201ENST00000444469 UNC93B1Q9H1C4 597 aa28.66■■■□□ 2.18
TMEM238-201ENST00000444469 CENPFP49454 3210 aa28.66■■■□□ 2.18
TMEM238-201ENST00000444469 TATDN1Q6P1N9 297 aa28.65■■■□□ 2.18
TMEM238-201ENST00000444469 U2AF1L4Q8WU68 220 aaKnown RBP28.65■■■□□ 2.18
TMEM238-201ENST00000444469 CWC22Q9HCG8 908 aaKnown RBP28.65■■■□□ 2.18
TMEM238-201ENST00000444469 PAG1Q9NWQ8 432 aa28.65■■■□□ 2.18
TMEM238-201ENST00000444469 MORF4L1Q9UBU8 362 aa28.65■■■□□ 2.18
TMEM238-201ENST00000444469 USP14P54578 494 aa28.64■■■□□ 2.18
TMEM238-201ENST00000444469 HERVK_113P62684 666 aa28.64■■■□□ 2.18
TMEM238-201ENST00000444469 ZYXQ15942 572 aaKnown RBP28.64■■■□□ 2.18
TMEM238-201ENST00000444469 GPRC5AQ8NFJ5 357 aa28.64■■■□□ 2.18
TMEM238-201ENST00000444469 SHISA4Q96DD7 197 aa28.64■■■□□ 2.18
TMEM238-201ENST00000444469 P2RX7Q99572 595 aaKnown RBP28.64■■■□□ 2.18
TMEM238-201ENST00000444469 HTATIP2Q9BUP3 242 aa28.64■■■□□ 2.18
TMEM238-201ENST00000444469 BOLA2Q9H3K6 86 aa28.64■■■□□ 2.18
TMEM238-201ENST00000444469 MCM9Q9NXL9 1143 aa28.64■■■□□ 2.18
TMEM238-201ENST00000444469 CAPN2P17655 700 aa28.63■■■□□ 2.17
TMEM238-201ENST00000444469 DPF3Q92784 378 aa28.63■■■□□ 2.17
TMEM238-201ENST00000444469 LRRCC1Q9C099 1032 aa28.63■■■□□ 2.17
TMEM238-201ENST00000444469 SGPL1O95470 568 aa28.61■■■□□ 2.17
TMEM238-201ENST00000444469 TFRCP02786 760 aaKnown RBP28.61■■■□□ 2.17
TMEM238-201ENST00000444469 ATP5JP18859 108 aa28.61■■■□□ 2.17
TMEM238-201ENST00000444469 AMOTL1Q8IY63 956 aa28.61■■■□□ 2.17
TMEM238-201ENST00000444469 DDRGK1Q96HY6 314 aa28.61■■■□□ 2.17
TMEM238-201ENST00000444469 PAGR1Q9BTK6 254 aa28.61■■■□□ 2.17
TMEM238-201ENST00000444469 MPHOSPH10O00566 681 aaKnown RBP28.6■■■□□ 2.17
TMEM238-201ENST00000444469 FARP2O94887 1054 aaPredicted RBP28.6■■■□□ 2.17
TMEM238-201ENST00000444469 HMGCRP04035 888 aa28.6■■■□□ 2.17
TMEM238-201ENST00000444469 PLCD1P51178 756 aa28.6■■■□□ 2.17
TMEM238-201ENST00000444469 EMILIN3Q9NT22 766 aa28.6■■■□□ 2.17
TMEM238-201ENST00000444469 USP17L15C9J2P7 530 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 USP17L13C9JLJ4 530 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 USP17L11C9JVI0 530 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 USP17L18D6R9N7 530 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 USP17L22D6RA61 530 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 USP17L17D6RBQ6 530 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 USP17L19D6RCP7 530 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 USP17L20D6RJB6 530 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 MAPK4P31152 587 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 USP17L24Q0WX57 530 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 SDR42E1Q8WUS8 393 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 SOCS4Q8WXH5 440 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 EDC3Q96F86 508 aaKnown RBP28.59■■■□□ 2.17
TMEM238-201ENST00000444469 DEFB118Q96PH6 123 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 NAV1Q8NEY1 1877 aa28.59■■■□□ 2.17
TMEM238-201ENST00000444469 C20orf194Q5TEA3 1177 aa28.58■■■□□ 2.17
TMEM238-201ENST00000444469 ZSCAN25Q6NSZ9 544 aa28.58■■■□□ 2.17
TMEM238-201ENST00000444469 LCORLQ8N3X6 602 aa28.58■■■□□ 2.17
TMEM238-201ENST00000444469 C12orf42Q96LP6 360 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms