RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 MTMR2Q13614 643 aa20.17■□□□□ 0.82
TSPAN9-204ENST00000444315 UBE3CQ15386 1083 aa20.17■□□□□ 0.82
TSPAN9-204ENST00000444315 SLFNL1Q499Z3 407 aa20.17■□□□□ 0.82
TSPAN9-204ENST00000444315 FSD1Q9BTV5 496 aa20.17■□□□□ 0.82
TSPAN9-204ENST00000444315 GINM1Q9NU53 330 aa20.17■□□□□ 0.82
TSPAN9-204ENST00000444315 AGTPBP1Q9UPW5 1226 aa20.17■□□□□ 0.82
TSPAN9-204ENST00000444315 SUPT16HQ9Y5B9 1047 aaKnown RBP20.17■□□□□ 0.82
TSPAN9-204ENST00000444315 BAZ2AQ9UIF9 1905 aaKnown RBP20.17■□□□□ 0.82
TSPAN9-204ENST00000444315 GLRX3O76003 335 aaKnown RBP20.16■□□□□ 0.82
TSPAN9-204ENST00000444315 GH2P01242 217 aa20.16■□□□□ 0.82
TSPAN9-204ENST00000444315 LACTBP83111 547 aaPredicted RBP20.16■□□□□ 0.82
TSPAN9-204ENST00000444315 RRP1BQ14684 758 aaKnown RBP20.16■□□□□ 0.82
TSPAN9-204ENST00000444315 ABCB5Q2M3G0 1257 aa20.16■□□□□ 0.82
TSPAN9-204ENST00000444315 GPAT2Q6NUI2 795 aa20.16■□□□□ 0.82
TSPAN9-204ENST00000444315 KBTBD3Q8NAB2 608 aa20.16■□□□□ 0.82
TSPAN9-204ENST00000444315 PROCA1Q8NCQ7 364 aaPredicted RBP20.16■□□□□ 0.82
TSPAN9-204ENST00000444315 EHD4Q9H223 541 aa20.16■□□□□ 0.82
TSPAN9-204ENST00000444315 DNAJC18Q9H819 358 aa20.16■□□□□ 0.82
TSPAN9-204ENST00000444315 IRX3P78415 501 aaPredicted RBP20.15■□□□□ 0.82
TSPAN9-204ENST00000444315 ZYXQ15942 572 aaKnown RBP20.15■□□□□ 0.82
TSPAN9-204ENST00000444315 DCP1AQ9NPI6 582 aaPredicted RBP20.15■□□□□ 0.82
TSPAN9-204ENST00000444315 ATP8A2Q9NTI2 1148 aa20.15■□□□□ 0.82
TSPAN9-204ENST00000444315 PTPN22Q9Y2R2 807 aa20.15■□□□□ 0.82
TSPAN9-204ENST00000444315 LOC285556D6RIA3 1793 aa20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 DDX60LQ5H9U9 1706 aaKnown RBP20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 USP17L10C9JJH3 530 aa20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 PRKAB2O43741 272 aa20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 APPP05067 770 aa20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 ZFYP08048 801 aaPredicted RBP20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 HOXD10P28358 340 aa20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 PSMC4P43686 418 aa20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 PLCD1P51178 756 aa20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 HDAC1Q13547 482 aaPredicted RBP20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 MOGSQ13724 837 aa20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 SLC9C1Q4G0N8 1177 aa20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 TREML2Q5T2D2 321 aa20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 B4GALNT3Q6L9W6 998 aa20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 EXOC6Q8TAG9 804 aa20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 SLC45A1Q9Y2W3 748 aa20.14■□□□□ 0.81
TSPAN9-204ENST00000444315 ZSWIM8A7E2V4 1837 aa20.13■□□□□ 0.81
TSPAN9-204ENST00000444315 RNF113AO15541 343 aaKnown RBP20.13■□□□□ 0.81
TSPAN9-204ENST00000444315 FCGRTP55899 365 aa20.13■□□□□ 0.81
TSPAN9-204ENST00000444315 C17orf99Q6UX52 265 aa20.13■□□□□ 0.81
TSPAN9-204ENST00000444315 OTUD7AQ8TE49 926 aaPredicted RBP20.13■□□□□ 0.81
TSPAN9-204ENST00000444315 ARHGAP39Q9C0H5 1083 aa20.13■□□□□ 0.81
TSPAN9-204ENST00000444315 C19orf81C9J6K1 198 aa20.12■□□□□ 0.81
TSPAN9-204ENST00000444315 CHGBP05060 677 aa20.12■□□□□ 0.81
TSPAN9-204ENST00000444315 CYP2D6P10635 497 aa20.12■□□□□ 0.81
TSPAN9-204ENST00000444315 BACE1P56817 501 aa20.12■□□□□ 0.81
TSPAN9-204ENST00000444315 SHROOM1Q2M3G4 852 aaPredicted RBP20.12■□□□□ 0.81
TSPAN9-204ENST00000444315 NBPF11Q86T75 865 aa20.12■□□□□ 0.81
TSPAN9-204ENST00000444315 METTL16Q86W50 562 aaKnown RBP20.12■□□□□ 0.81
TSPAN9-204ENST00000444315 RAET1EQ8TD07 263 aa20.12■□□□□ 0.81
TSPAN9-204ENST00000444315 APPBP2Q92624 585 aa20.12■□□□□ 0.81
TSPAN9-204ENST00000444315 WDR18Q9BV38 432 aa20.12■□□□□ 0.81
TSPAN9-204ENST00000444315 PUS7LQ9H0K6 701 aaKnown RBP20.12■□□□□ 0.81
TSPAN9-204ENST00000444315 SWAP70Q9UH65 585 aa20.12■□□□□ 0.81
TSPAN9-204ENST00000444315 GNRH1P01148 92 aa20.11■□□□□ 0.81
TSPAN9-204ENST00000444315 TDO2P48775 406 aa20.11■□□□□ 0.81
TSPAN9-204ENST00000444315 MLLT1Q03111 559 aaPredicted RBP20.11■□□□□ 0.81
TSPAN9-204ENST00000444315 USP17L2Q6R6M4 530 aa20.11■□□□□ 0.81
TSPAN9-204ENST00000444315 CCAR1Q8IX12 1150 aaKnown RBP20.11■□□□□ 0.81
TSPAN9-204ENST00000444315 ANKRD13CQ8N6S4 541 aa20.11■□□□□ 0.81
TSPAN9-204ENST00000444315 LNPKQ9C0E8 428 aa20.11■□□□□ 0.81
TSPAN9-204ENST00000444315 CWC22Q9HCG8 908 aaKnown RBP20.11■□□□□ 0.81
TSPAN9-204ENST00000444315 BIN2Q9UBW5 565 aaPredicted RBP20.11■□□□□ 0.81
TSPAN9-204ENST00000444315 TAOK2Q9UL54 1235 aa20.11■□□□□ 0.81
TSPAN9-204ENST00000444315 PTCH2Q9Y6C5 1203 aa20.11■□□□□ 0.81
TSPAN9-204ENST00000444315 MGAMO43451 1857 aa20.1■□□□□ 0.81
TSPAN9-204ENST00000444315 MYCP01106 439 aaPredicted RBP20.1■□□□□ 0.81
TSPAN9-204ENST00000444315 USP14P54578 494 aa20.1■□□□□ 0.81
TSPAN9-204ENST00000444315 IRX6P78412 446 aaPredicted RBP20.1■□□□□ 0.81
TSPAN9-204ENST00000444315 TATDN1Q6P1N9 297 aa20.1■□□□□ 0.81
TSPAN9-204ENST00000444315 STK11IPQ8N1F8 1099 aa20.1■□□□□ 0.81
TSPAN9-204ENST00000444315 DYNLL2Q96FJ2 89 aa20.1■□□□□ 0.81
TSPAN9-204ENST00000444315 MYPNQ86TC9 1320 aa20.09■□□□□ 0.81
TSPAN9-204ENST00000444315 TRIM6-TRIM34B2RNG4 842 aa20.09■□□□□ 0.81
TSPAN9-204ENST00000444315 USP17L12C9JPN9 530 aa20.09■□□□□ 0.81
TSPAN9-204ENST00000444315 USP17L21D6R901 530 aa20.09■□□□□ 0.81
TSPAN9-204ENST00000444315 TNPO2O14787 897 aaKnown RBP20.09■□□□□ 0.81
TSPAN9-204ENST00000444315 SHMT1P34896 483 aa20.09■□□□□ 0.81
TSPAN9-204ENST00000444315 PRMT2P55345 433 aa20.09■□□□□ 0.81
TSPAN9-204ENST00000444315 JAG1P78504 1218 aa20.09■□□□□ 0.81
TSPAN9-204ENST00000444315 TMEM106CQ9BVX2 250 aa20.09■□□□□ 0.81
TSPAN9-204ENST00000444315 ASCC2Q9H1I8 757 aaPredicted RBP20.09■□□□□ 0.81
TSPAN9-204ENST00000444315 ARPP21Q9UBL0 812 aaPredicted RBP20.09■□□□□ 0.81
TSPAN9-204ENST00000444315 ADGRA2Q96PE1 1338 aa20.08■□□□□ 0.81
TSPAN9-204ENST00000444315 CYP2D7A0A087X1C5 515 aa20.08■□□□□ 0.81
TSPAN9-204ENST00000444315 MINDY4BA8MYZ0 360 aa20.08■□□□□ 0.81
TSPAN9-204ENST00000444315 GPAA1O43292 621 aa20.08■□□□□ 0.81
TSPAN9-204ENST00000444315 GNAT2P19087 354 aa20.08■□□□□ 0.81
TSPAN9-204ENST00000444315 GCLCP48506 637 aaPredicted RBP20.08■□□□□ 0.81
TSPAN9-204ENST00000444315 ATP2B2Q01814 1243 aa20.08■□□□□ 0.81
TSPAN9-204ENST00000444315 SH3D19Q5HYK7 790 aa20.08■□□□□ 0.81
TSPAN9-204ENST00000444315 SLC44A5Q8NCS7 719 aa20.08■□□□□ 0.81
TSPAN9-204ENST00000444315 PI4K2BQ8TCG2 481 aa20.08■□□□□ 0.81
TSPAN9-204ENST00000444315 TRIM47Q96LD4 638 aa20.08■□□□□ 0.81
TSPAN9-204ENST00000444315 NACAP1Q9BZK3 213 aa20.08■□□□□ 0.81
TSPAN9-204ENST00000444315 RAD21O60216 631 aa20.07■□□□□ 0.8
TSPAN9-204ENST00000444315 BCRP11274 1271 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms