RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 CDK8P49336 464 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 PRELPP51888 382 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 DDX11Q96FC9 970 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 SERPINB13Q9UIV8 391 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 GJA3Q9Y6H8 435 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 NMT2O60551 498 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 RXRAP19793 462 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 LMNB1P20700 586 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 PDCP20941 246 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 SYT1P21579 422 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 RPS12P25398 132 aaKnown RBP11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 SEC23AQ15436 765 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 FOXD4L5Q5VV16 416 aaPredicted RBP11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 CCDC144CPQ8IYA2 1237 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 FAM184AQ8NB25 1140 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 FOXD4L4Q8WXT5 416 aaPredicted RBP11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 MYL10Q9BUA6 226 aa11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 DHX36Q9H2U1 1008 aaKnown RBP11.12□□□□□ -0.63
SMPD4P1-203ENST00000443839 WDR33Q9C0J8 1336 aaKnown RBP11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 PTPDC1A2A3K4 754 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 GOLGA8AA7E2F4 631 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 FZD9O00144 591 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 STX6O43752 255 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 MYO1BO43795 1136 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 RASA1P20936 1047 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 HMGN5P82970 282 aaKnown RBP11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 NFKBIBQ15653 356 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 LARP1BQ659C4 914 aaKnown RBP11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 NSUN7Q8NE18 718 aaKnown RBP11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 FAM198AQ9UFP1 575 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 KIF3AQ9Y496 699 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 CLRN2A0PK11 232 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 CTDNEP1O95476 244 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 CPLX2Q6PUV4 134 aaKnown RBP11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 CATIPQ7Z7H3 387 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 ZFPM1Q8IX07 1006 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 ZNF654Q8IZM8 581 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 CRACR2BQ8N4Y2 399 aaPredicted RBP11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 SMARCC2Q8TAQ2 1214 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 NUP133Q8WUM0 1156 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 GBP4Q96PP9 640 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 MYOZ2Q9NPC6 264 aa11.11□□□□□ -0.63
SMPD4P1-203ENST00000443839 VPS37CA5D8V6 355 aaPredicted RBP11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 PPFIA3O75145 1194 aa11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 ENTPD3O75355 529 aa11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 CDKL5O76039 1030 aa11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 BRD1O95696 1058 aa11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 GMPSP49915 693 aaPredicted RBP11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 MMP14P50281 582 aa11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 CCDC178Q5BJE1 867 aa11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 MTMR14Q8NCE2 650 aa11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 TRIM34Q9BYJ4 488 aa11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 PI4KBQ9UBF8 816 aa11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 ZNF70Q9UC06 446 aaPredicted RBP11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 SWAP70Q9UH65 585 aa11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 ZDHHC9Q9Y397 364 aa11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 MYH8P13535 1937 aa11.1□□□□□ -0.63
SMPD4P1-203ENST00000443839 TCP10L2B9ZVM9 353 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 PDIA4P13667 645 aaKnown RBP11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 ADD1P35611 737 aaKnown RBP11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 RCAN1P53805 252 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 GABPAQ06546 454 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 RTN1Q16799 776 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 SPDYE2Q495Y8 402 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 EHD4Q9H223 541 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 VEZTQ9HBM0 779 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 STX8Q9UNK0 236 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 ZNF541Q9H0D2 1346 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 CCDC196A0A1B0GTZ2 297 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 SHTN1A0MZ66 631 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 DDTLA6NHG4 134 aaPredicted RBP11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 DGKHQ86XP1 1220 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 MICALL2Q8IY33 904 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 DPF2Q92785 391 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 KAT14Q9H8E8 782 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 IL17RBQ9NRM6 502 aa11.09□□□□□ -0.63
SMPD4P1-203ENST00000443839 DICER1Q9UPY3 1922 aaKnown RBP11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 H3BQV1 296 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 WNT10BO00744 389 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 CALM1P0DP23 149 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 CALM2P0DP24 149 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 CALM3P0DP25 149 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 ZSCAN22P10073 491 aaPredicted RBP11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 YBX3P16989 372 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 CDC27P30260 824 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 ZNF280AP59817 542 aaPredicted RBP11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 NBPF9Q3BBW0 867 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 RBM26Q5T8P6 1007 aaKnown RBP11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 IFFO2Q5TF58 517 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 FANCBQ8NB91 859 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 NEDD1Q8NHV4 660 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 CSRNP1Q96S65 589 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 TCP11L1Q9NUJ3 509 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 CNOT7Q9UIV1 285 aaKnown RBP11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 NID2Q14112 1375 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 ATRNL1Q5VV63 1379 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 DDAH1O94760 285 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 PPP2R5BQ15173 497 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 RCSD1Q6JBY9 416 aa11.08□□□□□ -0.64
SMPD4P1-203ENST00000443839 SH3BP5LQ7L8J4 393 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms