RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 PPP4CP60510 307 aa10.24□□□□□ -0.77
TOP3B-209ENST00000442653 TTC39AQ5SRH9 613 aa10.24□□□□□ -0.77
TOP3B-209ENST00000442653 METTL16Q86W50 562 aaKnown RBP10.24□□□□□ -0.77
TOP3B-209ENST00000442653 SSH3Q8TE77 659 aa10.24□□□□□ -0.77
TOP3B-209ENST00000442653 PAWRQ96IZ0 340 aaKnown RBP10.24□□□□□ -0.77
TOP3B-209ENST00000442653 WDR18Q9BV38 432 aa10.24□□□□□ -0.77
TOP3B-209ENST00000442653 TBC1D2Q9BYX2 928 aa10.24□□□□□ -0.77
TOP3B-209ENST00000442653 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.24□□□□□ -0.77
TOP3B-209ENST00000442653 DHX36Q9H2U1 1008 aaKnown RBP10.24□□□□□ -0.77
TOP3B-209ENST00000442653 C1orf115Q9H7X2 142 aa10.24□□□□□ -0.77
TOP3B-209ENST00000442653 TXNRD2Q9NNW7 524 aa10.24□□□□□ -0.77
TOP3B-209ENST00000442653 GPR108Q9NPR9 543 aa10.24□□□□□ -0.77
TOP3B-209ENST00000442653 PIH1D3Q9NQM4 214 aaKnown RBP10.24□□□□□ -0.77
TOP3B-209ENST00000442653 PALD1Q9ULE6 856 aa10.24□□□□□ -0.77
TOP3B-209ENST00000442653 FOCADQ5VW36 1801 aa10.23□□□□□ -0.77
TOP3B-209ENST00000442653 GDF11O95390 407 aa10.23□□□□□ -0.77
TOP3B-209ENST00000442653 BAG3O95817 575 aa10.23□□□□□ -0.77
TOP3B-209ENST00000442653 ASNSP08243 561 aa10.23□□□□□ -0.77
TOP3B-209ENST00000442653 PLCG2P16885 1265 aa10.23□□□□□ -0.77
TOP3B-209ENST00000442653 MNX1P50219 401 aaPredicted RBP10.23□□□□□ -0.77
TOP3B-209ENST00000442653 BACE1P56817 501 aa10.23□□□□□ -0.77
TOP3B-209ENST00000442653 PABPC4Q13310 644 aaKnown RBP eCLIP10.23□□□□□ -0.77
TOP3B-209ENST00000442653 POTEEQ6S8J3 1075 aa10.23□□□□□ -0.77
TOP3B-209ENST00000442653 TRIB2Q92519 343 aa10.23□□□□□ -0.77
TOP3B-209ENST00000442653 P2RX7Q99572 595 aaKnown RBP10.23□□□□□ -0.77
TOP3B-209ENST00000442653 NOL10Q9BSC4 688 aaKnown RBP10.23□□□□□ -0.77
TOP3B-209ENST00000442653 AS3MTQ9HBK9 375 aa10.23□□□□□ -0.77
TOP3B-209ENST00000442653 TLR7Q9NYK1 1049 aaKnown RBP10.23□□□□□ -0.77
TOP3B-209ENST00000442653 MORF4L1Q9UBU8 362 aa10.23□□□□□ -0.77
TOP3B-209ENST00000442653 SAP30BPQ9UHR5 308 aaKnown RBP10.23□□□□□ -0.77
TOP3B-209ENST00000442653 DBNLQ9UJU6 430 aaKnown RBP10.23□□□□□ -0.77
TOP3B-209ENST00000442653 UNC80Q8N2C7 3258 aa10.23□□□□□ -0.77
TOP3B-209ENST00000442653 SOX1O00570 391 aaPredicted RBP10.22□□□□□ -0.77
TOP3B-209ENST00000442653 SURF6O75683 361 aaKnown RBP10.22□□□□□ -0.77
TOP3B-209ENST00000442653 HOXA7P31268 230 aaPredicted RBP10.22□□□□□ -0.77
TOP3B-209ENST00000442653 ZAP70P43403 619 aa10.22□□□□□ -0.77
TOP3B-209ENST00000442653 HERVK_113P62684 666 aa10.22□□□□□ -0.77
TOP3B-209ENST00000442653 DYNLL1P63167 89 aaKnown RBP10.22□□□□□ -0.77
TOP3B-209ENST00000442653 IRX3P78415 501 aaPredicted RBP10.22□□□□□ -0.77
TOP3B-209ENST00000442653 ATP8B2P98198 1209 aa10.22□□□□□ -0.77
TOP3B-209ENST00000442653 OS9Q13438 667 aaPredicted RBP10.22□□□□□ -0.77
TOP3B-209ENST00000442653 CCDC158Q5M9N0 1113 aa10.22□□□□□ -0.77
TOP3B-209ENST00000442653 ZKSCAN2Q63HK3 967 aa10.22□□□□□ -0.77
TOP3B-209ENST00000442653 NECAB2Q7Z6G3 386 aa10.22□□□□□ -0.77
TOP3B-209ENST00000442653 ZNF512BQ96KM6 892 aaPredicted RBP10.22□□□□□ -0.77
TOP3B-209ENST00000442653 STAP2Q9UGK3 403 aa10.22□□□□□ -0.77
TOP3B-209ENST00000442653 ZBTB21Q9ULJ3 1066 aa10.22□□□□□ -0.77
TOP3B-209ENST00000442653 RLBP1P12271 317 aa10.21□□□□□ -0.77
TOP3B-209ENST00000442653 PRKAR2AP13861 404 aaKnown RBP10.21□□□□□ -0.77
TOP3B-209ENST00000442653 CYP2B6P20813 491 aa10.21□□□□□ -0.77
TOP3B-209ENST00000442653 MAP3K21Q5TCX8 1036 aa10.21□□□□□ -0.77
TOP3B-209ENST00000442653 FOXP4Q8IVH2 680 aaPredicted RBP10.21□□□□□ -0.77
TOP3B-209ENST00000442653 CRACR2BQ8N4Y2 399 aaPredicted RBP10.21□□□□□ -0.77
TOP3B-209ENST00000442653 GPRC5AQ8NFJ5 357 aa10.21□□□□□ -0.77
TOP3B-209ENST00000442653 EAF2Q96CJ1 260 aaPredicted RBP10.21□□□□□ -0.77
TOP3B-209ENST00000442653 PORCNQ9H237 461 aa10.21□□□□□ -0.77
TOP3B-209ENST00000442653 HMX1Q9NP08 348 aaPredicted RBP10.21□□□□□ -0.77
TOP3B-209ENST00000442653 EMILIN3Q9NT22 766 aa10.21□□□□□ -0.77
TOP3B-209ENST00000442653 TMOD4Q9NZQ9 345 aa10.21□□□□□ -0.77
TOP3B-209ENST00000442653 RBPJLQ9UBG7 517 aa10.21□□□□□ -0.77
TOP3B-209ENST00000442653 NDUFB9Q9Y6M9 179 aa10.21□□□□□ -0.77
TOP3B-209ENST00000442653 RPTORQ8N122 1335 aa10.21□□□□□ -0.78
TOP3B-209ENST00000442653 DDX60LQ5H9U9 1706 aaKnown RBP10.21□□□□□ -0.78
TOP3B-209ENST00000442653 C19orf81C9J6K1 198 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 USP17L10C9JJH3 530 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 IDH1O75874 414 aaKnown RBP10.2□□□□□ -0.78
TOP3B-209ENST00000442653 GH2P01242 217 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 CAPN2P17655 700 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 CYP7A1P22680 504 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 Q3C1V9 767 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 C7orf61Q8IZ16 206 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 ANKLE1Q8NAG6 615 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 MIGA1Q8NAN2 632 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 USP6NLQ92738 828 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 LRCH3Q96II8 777 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 TRIM34Q9BYJ4 488 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 CCDC8Q9H0W5 538 aaPredicted RBP10.2□□□□□ -0.78
TOP3B-209ENST00000442653 OGDHLQ9ULD0 1010 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 NOP58Q9Y2X3 529 aaKnown RBP10.2□□□□□ -0.78
TOP3B-209ENST00000442653 EYSQ5T1H1 3165 aa10.2□□□□□ -0.78
TOP3B-209ENST00000442653 A0A1W2PPC1 479 aa10.19□□□□□ -0.78
TOP3B-209ENST00000442653 XRCC5P13010 732 aaKnown RBP10.19□□□□□ -0.78
TOP3B-209ENST00000442653 ERVK-9P63128 1117 aa10.19□□□□□ -0.78
TOP3B-209ENST00000442653 ERVK-24P63145 666 aa10.19□□□□□ -0.78
TOP3B-209ENST00000442653 CCL14Q16627 93 aa10.19□□□□□ -0.78
TOP3B-209ENST00000442653 ITPRIPQ8IWB1 547 aa10.19□□□□□ -0.78
TOP3B-209ENST00000442653 MAGEB6Q8N7X4 407 aa10.19□□□□□ -0.78
TOP3B-209ENST00000442653 SOCS4Q8WXH5 440 aa10.19□□□□□ -0.78
TOP3B-209ENST00000442653 GDF15Q99988 308 aa10.19□□□□□ -0.78
TOP3B-209ENST00000442653 NUDT12Q9BQG2 462 aa10.19□□□□□ -0.78
TOP3B-209ENST00000442653 PAGR1Q9BTK6 254 aa10.19□□□□□ -0.78
TOP3B-209ENST00000442653 NBPF3Q9H094 633 aa10.19□□□□□ -0.78
TOP3B-209ENST00000442653 ANTXR1Q9H6X2 564 aa10.19□□□□□ -0.78
TOP3B-209ENST00000442653 GINM1Q9NU53 330 aa10.19□□□□□ -0.78
TOP3B-209ENST00000442653 ZMYND8Q9ULU4 1186 aaPredicted RBP10.19□□□□□ -0.78
TOP3B-209ENST00000442653 PFASO15067 1338 aa10.18□□□□□ -0.78
TOP3B-209ENST00000442653 MYH1P12882 1939 aa10.18□□□□□ -0.78
TOP3B-209ENST00000442653 HLA-DOAP06340 250 aa10.18□□□□□ -0.78
TOP3B-209ENST00000442653 ZKSCAN1P17029 563 aaPredicted RBP10.18□□□□□ -0.78
TOP3B-209ENST00000442653 SYN1P17600 705 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms