RNA–Protein interactions for RNA: ENST00000442419.1

SNHG11-210, Transcript of small nucleolar RNA host gene 11, human

TSL 3

Gene SNHG11, Length 741 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG11-210	ENST00000442419	NBPF3	Q9H094	633 aa		14.04	□□□□□ -0.16
SNHG11-210	ENST00000442419	PDS5A	Q29RF7	1337 aa	Known RBP	14.04	□□□□□ -0.16
SNHG11-210	ENST00000442419	HIP1	O00291	1037 aa		14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	IGSF3	O75054	1194 aa		14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	FRAT2	O75474	233 aa	Predicted RBP	14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	ATXN8OS	P0DMR3	200 aa		14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	CHML	P26374	656 aa		14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	MCAM	P43121	646 aa		14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	FAM109B	Q6ICB4	259 aa	Predicted RBP	14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	POTED	Q86YR6	584 aa		14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	KBTBD3	Q8NAB2	608 aa		14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	RILPL2	Q969X0	211 aa		14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	COA7	Q96BR5	231 aa		14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	GNL3L	Q9NVN8	582 aa	Known RBP	14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	PAG1	Q9NWQ8	432 aa		14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	RPTOR	Q8N122	1335 aa		14.03	□□□□□ -0.16
SNHG11-210	ENST00000442419	ALPK3	Q96L96	1907 aa		14.02	□□□□□ -0.16
SNHG11-210	ENST00000442419	MGAM	O43451	1857 aa		14.02	□□□□□ -0.16
SNHG11-210	ENST00000442419	CASC1	Q6TDU7	716 aa		14.02	□□□□□ -0.17
SNHG11-210	ENST00000442419	UBE2O	Q9C0C9	1292 aa	Known RBP	14.02	□□□□□ -0.17
SNHG11-210	ENST00000442419	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	14.02	□□□□□ -0.17
SNHG11-210	ENST00000442419	EPB41L2	O43491	1005 aa	Known RBP	14.01	□□□□□ -0.17
SNHG11-210	ENST00000442419	HMGCR	P04035	888 aa		14.01	□□□□□ -0.17
SNHG11-210	ENST00000442419	TTF1	Q15361	905 aa	Predicted RBP	14.01	□□□□□ -0.17
SNHG11-210	ENST00000442419	SMCR8	Q8TEV9	937 aa	Predicted RBP	14.01	□□□□□ -0.17
SNHG11-210	ENST00000442419	C11orf49	Q9H6J7	331 aa		14.01	□□□□□ -0.17
SNHG11-210	ENST00000442419	SNRK	Q9NRH2	765 aa		14.01	□□□□□ -0.17
SNHG11-210	ENST00000442419	HMG20B	Q9P0W2	317 aa		14.01	□□□□□ -0.17
SNHG11-210	ENST00000442419	DENND2A	Q9ULE3	1009 aa		14.01	□□□□□ -0.17
SNHG11-210	ENST00000442419	ATRNL1	Q5VV63	1379 aa		14	□□□□□ -0.17
SNHG11-210	ENST00000442419	MAP4K4	O95819	1239 aa	Predicted RBP	14	□□□□□ -0.17
SNHG11-210	ENST00000442419	SYN1	P17600	705 aa		14	□□□□□ -0.17
SNHG11-210	ENST00000442419	ZAP70	P43403	619 aa		14	□□□□□ -0.17
SNHG11-210	ENST00000442419	RASGRF1	Q13972	1273 aa		14	□□□□□ -0.17
SNHG11-210	ENST00000442419	FAM110C	Q1W6H9	321 aa		14	□□□□□ -0.17
SNHG11-210	ENST00000442419	SCYL3	Q8IZE3	742 aa		14	□□□□□ -0.17
SNHG11-210	ENST00000442419	SPATA5	Q8NB90	893 aa		14	□□□□□ -0.17
SNHG11-210	ENST00000442419	DNAJC2	Q99543	621 aa	Known RBP	14	□□□□□ -0.17
SNHG11-210	ENST00000442419	PICK1	Q9NRD5	415 aa		14	□□□□□ -0.17
SNHG11-210	ENST00000442419	TSHZ2	Q9NRE2	1034 aa		14	□□□□□ -0.17
SNHG11-210	ENST00000442419	AFG3L2	Q9Y4W6	797 aa		14	□□□□□ -0.17
SNHG11-210	ENST00000442419	ZHX2	Q9Y6X8	837 aa		14	□□□□□ -0.17
SNHG11-210	ENST00000442419	PHF20L1	A8MW92	1017 aa		13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	POTEB2	H3BUK9	544 aa		13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	GOLIM4	O00461	696 aa		13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	CYP2E1	P05181	493 aa	Predicted RBP	13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	PTPRA	P18433	802 aa		13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	NFIA	Q12857	509 aa		13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	TMED8	Q6PL24	325 aa	Predicted RBP	13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	GADL1	Q6ZQY3	521 aa		13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	EDC3	Q96F86	508 aa	Known RBP	13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	ESYT1	Q9BSJ8	1104 aa		13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	HMX1	Q9NP08	348 aa	Predicted RBP	13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	TAOK2	Q9UL54	1235 aa		13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	OGDHL	Q9ULD0	1010 aa		13.99	□□□□□ -0.17
SNHG11-210	ENST00000442419	RAD50	Q92878	1312 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	SEC24B	O95487	1268 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	MYCN	P04198	464 aa	Predicted RBP	13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	ZFY	P08048	801 aa	Predicted RBP	13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	TCP10	Q12799	353 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	CDC42EP5	Q6NZY7	148 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	WDR66	Q8TBY9	1149 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	RUFY2	Q8WXA3	655 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	GUCD1	Q96NT3	240 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	FSD1	Q9BTV5	496 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	ANTXR1	Q9H6X2	564 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	PRDM6	Q9NQX0	595 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	FAM198A	Q9UFP1	575 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	PNMA3	Q9UL41	463 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	AGTPBP1	Q9UPW5	1226 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	DAGLA	Q9Y4D2	1042 aa		13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	COL2A1	P02458	1487 aa	Predicted RBP	13.98	□□□□□ -0.17
SNHG11-210	ENST00000442419	LAMA2	P24043	3122 aa	Known RBP	13.97	□□□□□ -0.17
SNHG11-210	ENST00000442419	SALL1	Q9NSC2	1324 aa		13.97	□□□□□ -0.17
SNHG11-210	ENST00000442419	SGSM2	O43147	1006 aa		13.97	□□□□□ -0.17
SNHG11-210	ENST00000442419	PI16	Q6UXB8	463 aa		13.97	□□□□□ -0.17
SNHG11-210	ENST00000442419	ANKRD13C	Q8N6S4	541 aa		13.97	□□□□□ -0.17
SNHG11-210	ENST00000442419	NDUFB9	Q9Y6M9	179 aa		13.97	□□□□□ -0.17
SNHG11-210	ENST00000442419	PFAS	O15067	1338 aa		13.96	□□□□□ -0.17
SNHG11-210	ENST00000442419	RNF113A	O15541	343 aa	Known RBP	13.96	□□□□□ -0.17
SNHG11-210	ENST00000442419	REC8	O95072	547 aa		13.96	□□□□□ -0.17
SNHG11-210	ENST00000442419	GCLC	P48506	637 aa	Predicted RBP	13.96	□□□□□ -0.17
SNHG11-210	ENST00000442419	MAP3K10	Q02779	954 aa		13.96	□□□□□ -0.17
SNHG11-210	ENST00000442419	UBE3C	Q15386	1083 aa		13.96	□□□□□ -0.17
SNHG11-210	ENST00000442419	ZMYM1	Q5SVZ6	1142 aa		13.96	□□□□□ -0.17
SNHG11-210	ENST00000442419	ZSCAN25	Q6NSZ9	544 aa		13.96	□□□□□ -0.17
SNHG11-210	ENST00000442419	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
SNHG11-210	ENST00000442419	PIH1D3	Q9NQM4	214 aa	Known RBP	13.96	□□□□□ -0.17
SNHG11-210	ENST00000442419	HELLS	Q9NRZ9	838 aa		13.96	□□□□□ -0.17
SNHG11-210	ENST00000442419	DIAPH3	Q9NSV4	1193 aa		13.96	□□□□□ -0.17
SNHG11-210	ENST00000442419	GJD2	Q9UKL4	321 aa		13.96	□□□□□ -0.17
SNHG11-210	ENST00000442419	MUC3A	Q02505	3323 aa		13.95	□□□□□ -0.18
SNHG11-210	ENST00000442419	CTNND1	O60716	968 aa	Known RBP	13.95	□□□□□ -0.18
SNHG11-210	ENST00000442419	ENTPD3	O75355	529 aa		13.95	□□□□□ -0.18
SNHG11-210	ENST00000442419	COL6A1	P12109	1028 aa		13.95	□□□□□ -0.18
SNHG11-210	ENST00000442419	MAP3K21	Q5TCX8	1036 aa		13.95	□□□□□ -0.18
SNHG11-210	ENST00000442419	IDI2	Q9BXS1	227 aa		13.95	□□□□□ -0.18
SNHG11-210	ENST00000442419	UPF2	Q9HAU5	1272 aa	Known RBP	13.95	□□□□□ -0.18
SNHG11-210	ENST00000442419	AK9	Q5TCS8	1911 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms