RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SERPINB13Q9UIV8 391 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 TRIM17Q9Y577 477 aa8.62□□□□□ -1.03
CDC42BPA-208ENST00000442054 ZSCAN22P10073 491 aaPredicted RBP8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 ZKSCAN1P17029 563 aaPredicted RBP8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 MCAMP43121 646 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 RFX5P48382 616 aaPredicted RBP8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 ABCB5Q2M3G0 1257 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 SDR42E1Q8WUS8 393 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 EVI5LQ96CN4 794 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 SPTLC3Q9NUV7 552 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 TLR7Q9NYK1 1049 aaKnown RBP8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 FAM205AQ6ZU69 1335 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 HSP90AA1P07900 732 aaKnown RBP8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 CNGA1P29973 690 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 GTF2A2P52657 109 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 HIRAP54198 1017 aaPredicted RBP8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 HAND2P61296 217 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 AKAP17AQ02040 695 aaKnown RBP8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 RNF20Q5VTR2 975 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 FASTKD5Q7L8L6 764 aaKnown RBP8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 ERO1BQ86YB8 467 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 OPTNQ96CV9 577 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 MROH7-TTC4A0A0A0MT08 1334 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 USP17L12C9JPN9 530 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 USP17L21D6R901 530 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 RNF113AO15541 343 aaKnown RBP8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 GNAT2P19087 354 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 INHBEP58166 350 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 IQCA1Q86XH1 822 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 CERS5Q8N5B7 392 aa8.61□□□□□ -1.03
CDC42BPA-208ENST00000442054 MYH7P12883 1935 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 ZNF213O14771 459 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 MAP2K2P36507 400 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 PRELPP51888 382 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 IMMTQ16891 758 aaKnown RBP8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 SH3RF3Q8TEJ3 882 aaPredicted RBP8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 COA7Q96BR5 231 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 ZDHHC15Q96MV8 337 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 EFCC1Q9HA90 598 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 TNPO2O14787 897 aaKnown RBP8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 PRDM1O75626 825 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 TBC1D8O95759 1140 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 GTF2F1P35269 517 aaKnown RBP eCLIP8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 SPDYE2Q495Y8 402 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 CPXCR1Q8N123 301 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 DDX11Q96FC9 970 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 RNF41Q9H4P4 317 aaPredicted RBP8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 CNPY2Q9Y2B0 182 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 PCDHAC2Q9Y5I4 1007 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 F13A1P00488 732 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 CPA1P15085 419 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 CCNA1P78396 465 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 ME3Q16798 604 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 UVSSAQ2YD98 709 aa8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 RNF216Q9NWF9 866 aaPredicted RBP8.6□□□□□ -1.03
CDC42BPA-208ENST00000442054 LRP5O75197 1615 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 CCDC171Q6TFL3 1326 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 AKAP11Q9UKA4 1901 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 USP17L5A8MUK1 530 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 ENTPD3O75355 529 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 INPP5BP32019 993 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 NFIAQ12857 509 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 TOB2Q14106 344 aaPredicted RBP8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 NBPF11Q86T75 865 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 SAPCD2Q86UD0 394 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 GDPD2Q9HCC8 539 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 TCEAL9Q9UHQ7 104 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 LIMCH1Q9UPQ0 1083 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 RFX7Q2KHR2 1363 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 ATP5JP18859 108 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 ZNF280AP59817 542 aaPredicted RBP8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 PPP4R3BQ5MIZ7 849 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 NUP133Q8WUM0 1156 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 APPBP2Q92624 585 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 ARAP2Q8WZ64 1704 aa8.59□□□□□ -1.03
CDC42BPA-208ENST00000442054 GH2P01242 217 aa8.59□□□□□ -1.04
CDC42BPA-208ENST00000442054 KCNF1Q9H3M0 494 aa8.59□□□□□ -1.04
CDC42BPA-208ENST00000442054 PIH1D3Q9NQM4 214 aaKnown RBP8.59□□□□□ -1.04
CDC42BPA-208ENST00000442054 TPCN1Q9ULQ1 816 aa8.59□□□□□ -1.04
CDC42BPA-208ENST00000442054 STX6O43752 255 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 MFSD6Q6ZSS7 791 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 CCDC84Q86UT8 332 aaPredicted RBP8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 KBTBD3Q8NAB2 608 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 CLMNQ96JQ2 1002 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 PARK7Q99497 189 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.58□□□□□ -1.042e-7■■□□□ 12.9
CDC42BPA-208ENST00000442054 ELP1O95163 1332 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 GPAA1O43292 621 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 FLOT1O75955 427 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 USP14P54578 494 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 HMGCS2P54868 508 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 FKBP1AP62942 108 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 ICA1Q05084 483 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 C15orf52Q6ZUT6 534 aaKnown RBP8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 DPP9Q86TI2 863 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 FAM83AQ86UY5 434 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 REM2Q8IYK8 340 aaPredicted RBP8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 PIBF1Q8WXW3 757 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 TSPY26PQ9H489 355 aa8.58□□□□□ -1.04
CDC42BPA-208ENST00000442054 SLC5A4Q9NY91 659 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms