RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ZBTB21Q9ULJ3 1066 aa16.56■□□□□ 0.24
LTBR-202ENST00000440421 HPS5Q9UPZ3 1129 aa16.56■□□□□ 0.24
LTBR-202ENST00000440421 GLRX3O76003 335 aaKnown RBP16.55■□□□□ 0.24
LTBR-202ENST00000440421 HMGCS2P54868 508 aa16.55■□□□□ 0.24
LTBR-202ENST00000440421 B4GALNT3Q6L9W6 998 aa16.55■□□□□ 0.24
LTBR-202ENST00000440421 FBXO46Q6PJ61 603 aaPredicted RBP16.55■□□□□ 0.24
LTBR-202ENST00000440421 PARK7Q99497 189 aaKnown RBP16.55■□□□□ 0.24
LTBR-202ENST00000440421 TBC1D2Q9BYX2 928 aa16.55■□□□□ 0.24
LTBR-202ENST00000440421 EFCC1Q9HA90 598 aa16.55■□□□□ 0.24
LTBR-202ENST00000440421 SLC4A4Q9Y6R1 1079 aa16.55■□□□□ 0.24
LTBR-202ENST00000440421 SALL3Q9BXA9 1300 aa16.54■□□□□ 0.24
LTBR-202ENST00000440421 RNF113AO15541 343 aaKnown RBP16.54■□□□□ 0.24
LTBR-202ENST00000440421 GH2P01242 217 aa16.54■□□□□ 0.24
LTBR-202ENST00000440421 IGHDP01880 384 aa16.54■□□□□ 0.24
LTBR-202ENST00000440421 MTMR2Q13614 643 aa16.54■□□□□ 0.24
LTBR-202ENST00000440421 CERKLQ49MI3 558 aaPredicted RBP16.54■□□□□ 0.24
LTBR-202ENST00000440421 TREML2Q5T2D2 321 aa16.54■□□□□ 0.24
LTBR-202ENST00000440421 TATDN1Q6P1N9 297 aa16.54■□□□□ 0.24
LTBR-202ENST00000440421 C17orf99Q6UX52 265 aa16.54■□□□□ 0.24
LTBR-202ENST00000440421 ATP8A2Q9NTI2 1148 aa16.54■□□□□ 0.24
LTBR-202ENST00000440421 AGTPBP1Q9UPW5 1226 aa16.54■□□□□ 0.24
LTBR-202ENST00000440421 BAZ2AQ9UIF9 1905 aaKnown RBP16.53■□□□□ 0.24
LTBR-202ENST00000440421 ADGRA2Q96PE1 1338 aa16.53■□□□□ 0.24
LTBR-202ENST00000440421 SHMT1P34896 483 aa16.53■□□□□ 0.24
LTBR-202ENST00000440421 KIF22Q14807 665 aa16.53■□□□□ 0.24
LTBR-202ENST00000440421 APPBP2Q92624 585 aa16.53■□□□□ 0.24
LTBR-202ENST00000440421 OSBP2Q969R2 916 aa16.53■□□□□ 0.24
LTBR-202ENST00000440421 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
LTBR-202ENST00000440421 FSD1Q9BTV5 496 aa16.53■□□□□ 0.24
LTBR-202ENST00000440421 WDR18Q9BV38 432 aa16.53■□□□□ 0.24
LTBR-202ENST00000440421 LNPKQ9C0E8 428 aa16.53■□□□□ 0.24
LTBR-202ENST00000440421 ARHGAP39Q9C0H5 1083 aa16.53■□□□□ 0.24
LTBR-202ENST00000440421 GINM1Q9NU53 330 aa16.53■□□□□ 0.24
LTBR-202ENST00000440421 ZSWIM8A7E2V4 1837 aa16.53■□□□□ 0.24
LTBR-202ENST00000440421 CYP2D7A0A087X1C5 515 aa16.52■□□□□ 0.24
LTBR-202ENST00000440421 ZFYP08048 801 aaPredicted RBP16.52■□□□□ 0.24
LTBR-202ENST00000440421 LACTBP83111 547 aaPredicted RBP16.52■□□□□ 0.24
LTBR-202ENST00000440421 GABPAQ06546 454 aa16.52■□□□□ 0.24
LTBR-202ENST00000440421 RAB3GAP1Q15042 981 aa16.52■□□□□ 0.24
LTBR-202ENST00000440421 ABCB5Q2M3G0 1257 aa16.52■□□□□ 0.24
LTBR-202ENST00000440421 SMC5Q8IY18 1101 aa16.52■□□□□ 0.24
LTBR-202ENST00000440421 PROCA1Q8NCQ7 364 aaPredicted RBP16.52■□□□□ 0.24
LTBR-202ENST00000440421 SLC44A5Q8NCS7 719 aa16.52■□□□□ 0.24
LTBR-202ENST00000440421 DYNLL2Q96FJ2 89 aa16.52■□□□□ 0.24
LTBR-202ENST00000440421 STRBPQ96SI9 672 aaKnown RBP16.52■□□□□ 0.24
LTBR-202ENST00000440421 PTPN22Q9Y2R2 807 aa16.52■□□□□ 0.24
LTBR-202ENST00000440421 SLC45A1Q9Y2W3 748 aa16.52■□□□□ 0.24
LTBR-202ENST00000440421 LOC285556D6RIA3 1793 aa16.51■□□□□ 0.23
LTBR-202ENST00000440421 USP17L10C9JJH3 530 aa16.51■□□□□ 0.23
LTBR-202ENST00000440421 USP17L12C9JPN9 530 aa16.51■□□□□ 0.23
LTBR-202ENST00000440421 USP17L21D6R901 530 aa16.51■□□□□ 0.23
LTBR-202ENST00000440421 SMIM22K7EJ46 135 aa16.51■□□□□ 0.23
LTBR-202ENST00000440421 M0R2C6 588 aa16.51■□□□□ 0.23
LTBR-202ENST00000440421 PDE1AP54750 535 aa16.51■□□□□ 0.23
LTBR-202ENST00000440421 BACE1P56817 501 aa16.51■□□□□ 0.23
LTBR-202ENST00000440421 ARHGEF6Q15052 776 aa16.51■□□□□ 0.23
LTBR-202ENST00000440421 SH3D19Q5HYK7 790 aa16.51■□□□□ 0.23
LTBR-202ENST00000440421 AMOTL1Q8IY63 956 aa16.51■□□□□ 0.23
LTBR-202ENST00000440421 SMCR8Q8TEV9 937 aaPredicted RBP16.51■□□□□ 0.23
LTBR-202ENST00000440421 CABP5Q9NP86 173 aa16.51■□□□□ 0.23
LTBR-202ENST00000440421 TMOD4Q9NZQ9 345 aa16.51■□□□□ 0.23
LTBR-202ENST00000440421 MPHOSPH10O00566 681 aaKnown RBP16.5■□□□□ 0.23
LTBR-202ENST00000440421 LRRFIP1Q32MZ4 808 aaKnown RBP16.5■□□□□ 0.23
LTBR-202ENST00000440421 C12orf60Q5U649 245 aa16.5■□□□□ 0.23
LTBR-202ENST00000440421 FEZ1Q99689 392 aa16.5■□□□□ 0.23
LTBR-202ENST00000440421 STAP2Q9UGK3 403 aa16.5■□□□□ 0.23
LTBR-202ENST00000440421 C19orf81C9J6K1 198 aa16.49■□□□□ 0.23
LTBR-202ENST00000440421 GPAA1O43292 621 aa16.49■□□□□ 0.23
LTBR-202ENST00000440421 BCRP11274 1271 aa16.49■□□□□ 0.23
LTBR-202ENST00000440421 OSBPP22059 807 aa16.49■□□□□ 0.23
LTBR-202ENST00000440421 CTGFP29279 349 aa16.49■□□□□ 0.23
LTBR-202ENST00000440421 SOX10P56693 466 aa16.49■□□□□ 0.23
LTBR-202ENST00000440421 PABPC4Q13310 644 aaKnown RBP eCLIP16.49■□□□□ 0.23
LTBR-202ENST00000440421 ZYXQ15942 572 aaKnown RBP16.49■□□□□ 0.23
LTBR-202ENST00000440421 CTR9Q6PD62 1173 aa16.49■□□□□ 0.23
LTBR-202ENST00000440421 CHD1LQ86WJ1 897 aa16.49■□□□□ 0.23
LTBR-202ENST00000440421 SEC62Q99442 399 aaKnown RBP16.49■□□□□ 0.23
LTBR-202ENST00000440421 SWAP70Q9UH65 585 aa16.49■□□□□ 0.23
LTBR-202ENST00000440421 PNMA3Q9UL41 463 aa16.49■□□□□ 0.23
LTBR-202ENST00000440421 GSG1L2A8MUP6 293 aa16.48■□□□□ 0.23
LTBR-202ENST00000440421 FMNL1O95466 1100 aaPredicted RBP16.48■□□□□ 0.23
LTBR-202ENST00000440421 GUCY1A2P33402 732 aa16.48■□□□□ 0.23
LTBR-202ENST00000440421 PSMC4P43686 418 aa16.48■□□□□ 0.23
LTBR-202ENST00000440421 SEPT2Q15019 361 aa16.48■□□□□ 0.23
LTBR-202ENST00000440421 USP17L2Q6R6M4 530 aa16.48■□□□□ 0.23
LTBR-202ENST00000440421 ASCC2Q9H1I8 757 aaPredicted RBP16.48■□□□□ 0.23
LTBR-202ENST00000440421 APPP05067 770 aa16.47■□□□□ 0.23
LTBR-202ENST00000440421 CDK8P49336 464 aa16.47■□□□□ 0.23
LTBR-202ENST00000440421 NUCB1Q02818 461 aa16.47■□□□□ 0.23
LTBR-202ENST00000440421 ZMYM1Q5SVZ6 1142 aa16.47■□□□□ 0.23
LTBR-202ENST00000440421 STK11IPQ8N1F8 1099 aa16.47■□□□□ 0.23
LTBR-202ENST00000440421 ANKRD13CQ8N6S4 541 aa16.47■□□□□ 0.23
LTBR-202ENST00000440421 ACER1Q8TDN7 264 aa16.47■□□□□ 0.23
LTBR-202ENST00000440421 EVI5LQ96CN4 794 aa16.47■□□□□ 0.23
LTBR-202ENST00000440421 TRIM47Q96LD4 638 aa16.47■□□□□ 0.23
LTBR-202ENST00000440421 EMILIN3Q9NT22 766 aa16.47■□□□□ 0.23
LTBR-202ENST00000440421 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
LTBR-202ENST00000440421 PTCH2Q9Y6C5 1203 aa16.47■□□□□ 0.23
LTBR-202ENST00000440421 MYH8P13535 1937 aa16.47■□□□□ 0.23
LTBR-202ENST00000440421 MINDY4BA8MYZ0 360 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms