RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ARMC5Q96C12 935 aa24.01■■□□□ 1.43
SHROOM1-204ENST00000440118 HAUS7Q99871 368 aa24.01■■□□□ 1.43
SHROOM1-204ENST00000440118 RIOK1Q9BRS2 568 aaKnown RBP24.01■■□□□ 1.43
SHROOM1-204ENST00000440118 ZBTB21Q9ULJ3 1066 aa24.01■■□□□ 1.43
SHROOM1-204ENST00000440118 RAET1EQ8TD07 263 aa24■■□□□ 1.43
SHROOM1-204ENST00000440118 TRIM47Q96LD4 638 aa24■■□□□ 1.43
SHROOM1-204ENST00000440118 TMEM106CQ9BVX2 250 aa24■■□□□ 1.43
SHROOM1-204ENST00000440118 GINM1Q9NU53 330 aa24■■□□□ 1.43
SHROOM1-204ENST00000440118 MYCP01106 439 aaPredicted RBP23.99■■□□□ 1.43
SHROOM1-204ENST00000440118 BCRP11274 1271 aa23.99■■□□□ 1.43
SHROOM1-204ENST00000440118 OSBPP22059 807 aa23.99■■□□□ 1.43
SHROOM1-204ENST00000440118 METTL16Q86W50 562 aaKnown RBP23.99■■□□□ 1.43
SHROOM1-204ENST00000440118 FEZ1Q99689 392 aa23.99■■□□□ 1.43
SHROOM1-204ENST00000440118 EHD4Q9H223 541 aa23.99■■□□□ 1.43
SHROOM1-204ENST00000440118 MCM9Q9NXL9 1143 aa23.99■■□□□ 1.43
SHROOM1-204ENST00000440118 MYPNQ86TC9 1320 aa23.99■■□□□ 1.43
SHROOM1-204ENST00000440118 CENPFP49454 3210 aa23.99■■□□□ 1.43
SHROOM1-204ENST00000440118 BAZ2AQ9UIF9 1905 aaKnown RBP23.98■■□□□ 1.43
SHROOM1-204ENST00000440118 ZSCAN25Q6NSZ9 544 aa23.98■■□□□ 1.43
SHROOM1-204ENST00000440118 LCORLQ8N3X6 602 aa23.98■■□□□ 1.43
SHROOM1-204ENST00000440118 WDR18Q9BV38 432 aa23.98■■□□□ 1.43
SHROOM1-204ENST00000440118 DCTPP1Q9H773 170 aa23.98■■□□□ 1.43
SHROOM1-204ENST00000440118 ECHDC1Q9NTX5 307 aa23.98■■□□□ 1.43
SHROOM1-204ENST00000440118 SRRDQ9UH36 339 aa23.98■■□□□ 1.43
SHROOM1-204ENST00000440118 GH2P01242 217 aa23.97■■□□□ 1.43
SHROOM1-204ENST00000440118 BACE1P56817 501 aa23.97■■□□□ 1.43
SHROOM1-204ENST00000440118 IRX3P78415 501 aaPredicted RBP23.97■■□□□ 1.43
SHROOM1-204ENST00000440118 ANKRD13CQ8N6S4 541 aa23.97■■□□□ 1.43
SHROOM1-204ENST00000440118 SH3TC2Q8TF17 1288 aa23.97■■□□□ 1.43
SHROOM1-204ENST00000440118 SDR42E1Q8WUS8 393 aa23.97■■□□□ 1.43
SHROOM1-204ENST00000440118 DDRGK1Q96HY6 314 aa23.97■■□□□ 1.43
SHROOM1-204ENST00000440118 ARMT1Q9H993 441 aa23.97■■□□□ 1.43
SHROOM1-204ENST00000440118 TCRBV5S4A2TA0A5A2 114 aa23.96■■□□□ 1.43
SHROOM1-204ENST00000440118 MBD4O95243 580 aa23.96■■□□□ 1.43
SHROOM1-204ENST00000440118 ADD2P35612 726 aa23.96■■□□□ 1.43
SHROOM1-204ENST00000440118 SHROOM1Q2M3G4 852 aaPredicted RBP23.96■■□□□ 1.43
SHROOM1-204ENST00000440118 CERKLQ49MI3 558 aaPredicted RBP23.96■■□□□ 1.43
SHROOM1-204ENST00000440118 AMOTL1Q8IY63 956 aa23.96■■□□□ 1.43
SHROOM1-204ENST00000440118 ZNF333Q96JL9 665 aa23.96■■□□□ 1.43
SHROOM1-204ENST00000440118 CABP5Q9NP86 173 aa23.96■■□□□ 1.43
SHROOM1-204ENST00000440118 ZBTB47Q9UFB7 747 aaPredicted RBP23.96■■□□□ 1.43
SHROOM1-204ENST00000440118 C19orf81C9J6K1 198 aa23.95■■□□□ 1.42
SHROOM1-204ENST00000440118 USP17L10C9JJH3 530 aa23.95■■□□□ 1.42
SHROOM1-204ENST00000440118 TNPO2O14787 897 aaKnown RBP23.95■■□□□ 1.42
SHROOM1-204ENST00000440118 CTGFP29279 349 aa23.95■■□□□ 1.42
SHROOM1-204ENST00000440118 RAB3GAP1Q15042 981 aa23.95■■□□□ 1.42
SHROOM1-204ENST00000440118 POTEFA5A3E0 1075 aa23.94■■□□□ 1.42
SHROOM1-204ENST00000440118 GCLCP48506 637 aaPredicted RBP23.94■■□□□ 1.42
SHROOM1-204ENST00000440118 JAG1P78504 1218 aa23.94■■□□□ 1.42
SHROOM1-204ENST00000440118 ABCB5Q2M3G0 1257 aa23.94■■□□□ 1.42
SHROOM1-204ENST00000440118 SH3D19Q5HYK7 790 aa23.94■■□□□ 1.42
SHROOM1-204ENST00000440118 BIN2Q9UBW5 565 aaPredicted RBP23.94■■□□□ 1.42
SHROOM1-204ENST00000440118 MPHOSPH10O00566 681 aaKnown RBP23.93■■□□□ 1.42
SHROOM1-204ENST00000440118 PLCD1P51178 756 aa23.93■■□□□ 1.42
SHROOM1-204ENST00000440118 PRKCZQ05513 592 aa23.93■■□□□ 1.42
SHROOM1-204ENST00000440118 FAM110CQ1W6H9 321 aa23.93■■□□□ 1.42
SHROOM1-204ENST00000440118 TATDN1Q6P1N9 297 aa23.93■■□□□ 1.42
SHROOM1-204ENST00000440118 ASCC2Q9H1I8 757 aaPredicted RBP23.93■■□□□ 1.42
SHROOM1-204ENST00000440118 TAOK2Q9UL54 1235 aa23.93■■□□□ 1.42
SHROOM1-204ENST00000440118 UBE3CQ15386 1083 aa23.92■■□□□ 1.42
SHROOM1-204ENST00000440118 ZYXQ15942 572 aaKnown RBP23.92■■□□□ 1.42
SHROOM1-204ENST00000440118 SLFNL1Q499Z3 407 aa23.92■■□□□ 1.42
SHROOM1-204ENST00000440118 TSHZ3Q63HK5 1081 aa23.92■■□□□ 1.42
SHROOM1-204ENST00000440118 CRBNQ96SW2 442 aa23.92■■□□□ 1.42
SHROOM1-204ENST00000440118 DCP1AQ9NPI6 582 aaPredicted RBP23.92■■□□□ 1.42
SHROOM1-204ENST00000440118 PCDHB15Q9Y5E8 787 aa23.92■■□□□ 1.42
SHROOM1-204ENST00000440118 GRK4P32298 578 aa23.91■■□□□ 1.42
SHROOM1-204ENST00000440118 USP17L2Q6R6M4 530 aa23.91■■□□□ 1.42
SHROOM1-204ENST00000440118 COA7Q96BR5 231 aa23.91■■□□□ 1.42
SHROOM1-204ENST00000440118 ATP8A2Q9NTI2 1148 aa23.91■■□□□ 1.42
SHROOM1-204ENST00000440118 DOCK3Q8IZD9 2030 aa23.9■■□□□ 1.42
SHROOM1-204ENST00000440118 SHMT1P34896 483 aa23.9■■□□□ 1.42
SHROOM1-204ENST00000440118 PRKAB2O43741 272 aa23.89■■□□□ 1.41
SHROOM1-204ENST00000440118 CYP2D6P10635 497 aa23.89■■□□□ 1.41
SHROOM1-204ENST00000440118 USP14P54578 494 aa23.89■■□□□ 1.41
SHROOM1-204ENST00000440118 SWAP70Q9UH65 585 aa23.89■■□□□ 1.41
SHROOM1-204ENST00000440118 SLC4A4Q9Y6R1 1079 aa23.89■■□□□ 1.41
SHROOM1-204ENST00000440118 ERC2O15083 957 aa23.88■■□□□ 1.41
SHROOM1-204ENST00000440118 EN2P19622 333 aaPredicted RBP23.88■■□□□ 1.41
SHROOM1-204ENST00000440118 UBXN2AP68543 259 aa23.88■■□□□ 1.41
SHROOM1-204ENST00000440118 LRRFIP1Q32MZ4 808 aaKnown RBP23.88■■□□□ 1.41
SHROOM1-204ENST00000440118 SLAIN1Q8ND83 568 aa23.88■■□□□ 1.41
SHROOM1-204ENST00000440118 GABRQQ9UN88 632 aa23.88■■□□□ 1.41
SHROOM1-204ENST00000440118 CHGBP05060 677 aa23.87■■□□□ 1.41
SHROOM1-204ENST00000440118 FLT3LGP49771 235 aa23.87■■□□□ 1.41
SHROOM1-204ENST00000440118 CCAR1Q8IX12 1150 aaKnown RBP23.87■■□□□ 1.41
SHROOM1-204ENST00000440118 KBTBD3Q8NAB2 608 aa23.87■■□□□ 1.41
SHROOM1-204ENST00000440118 TTC41PQ6P2S7 1318 aa23.86■■□□□ 1.41
SHROOM1-204ENST00000440118 ADCY3O60266 1144 aa23.86■■□□□ 1.41
SHROOM1-204ENST00000440118 HOXA7P31268 230 aaPredicted RBP23.86■■□□□ 1.41
SHROOM1-204ENST00000440118 HERVK_113P62684 666 aa23.86■■□□□ 1.41
SHROOM1-204ENST00000440118 CWC22Q9HCG8 908 aaKnown RBP23.86■■□□□ 1.41
SHROOM1-204ENST00000440118 EMILIN3Q9NT22 766 aa23.86■■□□□ 1.41
SHROOM1-204ENST00000440118 EVX2Q03828 476 aa23.85■■□□□ 1.41
SHROOM1-204ENST00000440118 GABPAQ06546 454 aa23.85■■□□□ 1.41
SHROOM1-204ENST00000440118 SEPT2Q15019 361 aa23.85■■□□□ 1.41
SHROOM1-204ENST00000440118 SLC44A5Q8NCS7 719 aa23.85■■□□□ 1.41
SHROOM1-204ENST00000440118 GTF3C2Q8WUA4 911 aaPredicted RBP23.85■■□□□ 1.41
SHROOM1-204ENST00000440118 P2RX7Q99572 595 aaKnown RBP23.85■■□□□ 1.41
SHROOM1-204ENST00000440118 PAGR1Q9BTK6 254 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms