RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 USP49Q70CQ1 688 aa13.21□□□□□ -0.3
SMPD4-209ENST00000439886 ARMCX6Q7L4S7 300 aa13.21□□□□□ -0.3
SMPD4-209ENST00000439886 PSD3Q9NYI0 1048 aa13.21□□□□□ -0.3
SMPD4-209ENST00000439886 CTNND2Q9UQB3 1225 aa13.21□□□□□ -0.3
SMPD4-209ENST00000439886 MAP2K7O14733 419 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 PPFIA4O75335 1185 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 SSBP05455 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMPD4-209ENST00000439886 RDXP35241 583 aaKnown RBP13.2□□□□□ -0.3
SMPD4-209ENST00000439886 BLZF1Q9H2G9 400 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 BABAM1Q9NWV8 329 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 MACROD2A1Z1Q3 448 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 INPP5BP32019 993 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 GGCXP38435 758 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 SSRP1Q08945 709 aaKnown RBP13.2□□□□□ -0.3
SMPD4-209ENST00000439886 SF3A3Q12874 501 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■■■■□ 22.7
SMPD4-209ENST00000439886 CCDC122Q5T0U0 273 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 RRAGBQ5VZM2 374 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 TEX13AQ9BXU3 409 aaPredicted RBP13.2□□□□□ -0.3
SMPD4-209ENST00000439886 CABP5Q9NP86 173 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 TUBE1Q9UJT0 475 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 CAPN7Q9Y6W3 813 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 HOXB7P09629 217 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 GNGT1P63211 74 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 ESCO1Q5FWF5 840 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 ZMYM1Q5SVZ6 1142 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 KCTD16Q68DU8 428 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 SND1Q7KZF4 910 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMPD4-209ENST00000439886 DIS3L2Q8IYB7 885 aaKnown RBP13.2□□□□□ -0.3
SMPD4-209ENST00000439886 MLKLQ8NB16 471 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 ANKRD24Q8TF21 1146 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 PUS3Q9BZE2 481 aaKnown RBP13.2□□□□□ -0.3
SMPD4-209ENST00000439886 SENP2Q9HC62 589 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 GNL3LQ9NVN8 582 aaKnown RBP13.2□□□□□ -0.3
SMPD4-209ENST00000439886 SLC12A7Q9Y666 1083 aa13.2□□□□□ -0.3
SMPD4-209ENST00000439886 SYNRGQ9UMZ2 1314 aa13.19□□□□□ -0.3
SMPD4-209ENST00000439886 CORO7P57737 925 aa13.19□□□□□ -0.3
SMPD4-209ENST00000439886 ZC3H6P61129 1189 aaKnown RBP13.19□□□□□ -0.3
SMPD4-209ENST00000439886 COPRSQ9NQ92 184 aa13.19□□□□□ -0.3
SMPD4-209ENST00000439886 NRKQ7Z2Y5 1582 aa13.19□□□□□ -0.3
SMPD4-209ENST00000439886 FXR1P51114 621 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMPD4-209ENST00000439886 NR5A1Q13285 461 aa13.19□□□□□ -0.3
SMPD4-209ENST00000439886 NUCKS1Q9H1E3 243 aaKnown RBP13.19□□□□□ -0.3
SMPD4-209ENST00000439886 ATP2B2Q01814 1243 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 ZKSCAN8Q15776 578 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-209ENST00000439886 TRIM22Q8IYM9 498 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 JPH2Q9BR39 696 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-209ENST00000439886 METTL22Q9BUU2 404 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-209ENST00000439886 UBXN6Q9BZV1 441 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 ATG3Q9NT62 314 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 OVOS2A0A0J9YW53 1432 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 OVOS2Q6IE36 1432 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 CCDC196A0A1B0GTZ2 297 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 GOLGA6BA6NDN3 693 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 NDUFAB1O14561 156 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 ADORA1P30542 326 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 EIF5P55010 431 aaKnown RBP13.18□□□□□ -0.3
SMPD4-209ENST00000439886 UBXN1Q04323 297 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 MMS22LQ6ZRQ5 1243 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 EFCAB13Q8IY85 973 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 RAPGEF4Q8WZA2 1011 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 PUS7LQ9H0K6 701 aaKnown RBP13.18□□□□□ -0.3
SMPD4-209ENST00000439886 FAM169AQ9Y6X4 670 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 A0A087WUV0 522 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-209ENST00000439886 GPAA1O43292 621 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 A1BGP04217 495 aa13.18□□□□□ -0.3
SMPD4-209ENST00000439886 ANGEL1Q9UNK9 670 aaKnown RBP13.18□□□□□ -0.3
SMPD4-209ENST00000439886 ECM2O94769 699 aaPredicted RBP13.17□□□□□ -0.3
SMPD4-209ENST00000439886 ZAP70P43403 619 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 RESP18Q5W5W9 173 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 CNGA4Q8IV77 575 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 CPSF2Q9P2I0 782 aaKnown RBP13.17□□□□□ -0.3
SMPD4-209ENST00000439886 WWC3Q9ULE0 1092 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 TTF2Q9UNY4 1162 aaKnown RBP13.17□□□□□ -0.3
SMPD4-209ENST00000439886 HPS5Q9UPZ3 1129 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 CEP57Q86XR8 500 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 AIDAQ96BJ3 306 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 KAT14Q9H8E8 782 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 PCDHB6Q9Y5E3 794 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 LTKP29376 864 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 SLC7A5Q01650 507 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 C2orf54Q08AI8 447 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 CCDC57Q2TAC2 916 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 ENOX1Q8TC92 643 aaKnown RBP13.17□□□□□ -0.3
SMPD4-209ENST00000439886 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
SMPD4-209ENST00000439886 EPSTI1Q96J88 318 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 CHP1Q99653 195 aa13.17□□□□□ -0.3
SMPD4-209ENST00000439886 DLC1Q96QB1 1528 aa13.16□□□□□ -0.3
SMPD4-209ENST00000439886 ERCC3P19447 782 aa13.16□□□□□ -0.3
SMPD4-209ENST00000439886 USP8P40818 1118 aa13.16□□□□□ -0.3
SMPD4-209ENST00000439886 WHAMMP3Q1A5X7 153 aa13.16□□□□□ -0.3
SMPD4-209ENST00000439886 CCDC181Q5TID7 509 aa13.16□□□□□ -0.3
SMPD4-209ENST00000439886 MMS19Q96T76 1030 aa13.16□□□□□ -0.3
SMPD4-209ENST00000439886 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
SMPD4-209ENST00000439886 PXDNLA1KZ92 1463 aa13.16□□□□□ -0.3
SMPD4-209ENST00000439886 A0A0G2JS52 829 aa13.16□□□□□ -0.3
SMPD4-209ENST00000439886 ZNF185O15231 689 aa13.16□□□□□ -0.3
SMPD4-209ENST00000439886 ZPR1O75312 459 aa13.16□□□□□ -0.3
SMPD4-209ENST00000439886 ANKRD18AQ8IVF6 992 aa13.16□□□□□ -0.3
SMPD4-209ENST00000439886 PLIN2Q99541 437 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms