RNA–Protein interactions for RNA: ENST00000439649.7

GFRA1-204, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GFRA1, Length 9,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-204ENST00000439649 C20orf194Q5TEA3 1177 aa13.56□□□□□ -0.24
GFRA1-204ENST00000439649 HELLSQ9NRZ9 838 aa13.56□□□□□ -0.24
GFRA1-204ENST00000439649 ANGEL1Q9UNK9 670 aaKnown RBP13.56□□□□□ -0.24
GFRA1-204ENST00000439649 STAG1Q8WVM7 1258 aa13.56□□□□□ -0.24
GFRA1-204ENST00000439649 PDZD4Q76G19 769 aaPredicted RBP13.56□□□□□ -0.24
GFRA1-204ENST00000439649 KRT12Q99456 494 aa13.56□□□□□ -0.24
GFRA1-204ENST00000439649 CCDC169A6NNP5 214 aa13.56□□□□□ -0.24
GFRA1-204ENST00000439649 RFC4P35249 363 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 LMNB2Q03252 620 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 LRCH2Q5VUJ6 765 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 PPP1R2P3Q6NXS1 205 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 ABCA5Q8WWZ7 1642 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 MYH7P12883 1935 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 SLMAPQ14BN4 828 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 MCTP2Q6DN12 878 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 RILPQ96NA2 401 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 FAM8A1Q9UBU6 413 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 PNMA2Q9UL42 364 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 SEPT2Q15019 361 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 HACE1Q8IYU2 909 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 CSGALNACT2Q8N6G5 542 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 SOS2Q07890 1332 aaPredicted RBP13.55□□□□□ -0.24
GFRA1-204ENST00000439649 PTPDC1A2A3K4 754 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 VWA3AA6NCI4 1184 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 EXOC5O00471 708 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 MAGEF1Q9HAY2 307 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 TBC1D8O95759 1140 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 TNFAIP3P21580 790 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 GABPAQ06546 454 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 HSP90AA4PQ58FG1 418 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 SFMBT2Q5VUG0 894 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 SETDB2Q96T68 719 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 EFHD1Q9BUP0 239 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 SPZ1Q9BXG8 430 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 PPP1R9AQ9ULJ8 1098 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 POLR1AO95602 1720 aaPredicted RBP13.55□□□□□ -0.24
GFRA1-204ENST00000439649 MAST3O60307 1309 aa13.55□□□□□ -0.24
GFRA1-204ENST00000439649 KARSQ15046 597 aaKnown RBP13.54□□□□□ -0.24
GFRA1-204ENST00000439649 TRIM42Q8IWZ5 723 aa13.54□□□□□ -0.24
GFRA1-204ENST00000439649 WHAMMQ8TF30 809 aa13.54□□□□□ -0.24
GFRA1-204ENST00000439649 PSPC1Q8WXF1 523 aaKnown RBP13.54□□□□□ -0.24
GFRA1-204ENST00000439649 BACH1O14867 736 aa13.54□□□□□ -0.24
GFRA1-204ENST00000439649 CTNNA1P35221 906 aaKnown RBP13.54□□□□□ -0.24
GFRA1-204ENST00000439649 ZSCAN26Q16670 478 aa13.54□□□□□ -0.24
GFRA1-204ENST00000439649 CCDC93Q567U6 631 aa13.54□□□□□ -0.24
GFRA1-204ENST00000439649 CREB3L3Q68CJ9 461 aa13.54□□□□□ -0.24
GFRA1-204ENST00000439649 KSR2Q6VAB6 950 aa13.54□□□□□ -0.24
GFRA1-204ENST00000439649 RIOK3O14730 519 aaKnown RBP13.54□□□□□ -0.24
GFRA1-204ENST00000439649 PDE1CQ14123 709 aaPredicted RBP13.54□□□□□ -0.24
GFRA1-204ENST00000439649 MYO1AQ9UBC5 1043 aa13.54□□□□□ -0.24
GFRA1-204ENST00000439649 BZW2Q9Y6E2 419 aaKnown RBP13.54□□□□□ -0.24
GFRA1-204ENST00000439649 LRRD1A4D1F6 860 aa13.54□□□□□ -0.24
GFRA1-204ENST00000439649 ZNF445P59923 1031 aa13.54□□□□□ -0.24
GFRA1-204ENST00000439649 THUMPD2Q9BTF0 503 aaKnown RBP13.54□□□□□ -0.24
GFRA1-204ENST00000439649 CA8P35219 290 aa13.54□□□□□ -0.24
GFRA1-204ENST00000439649 ARHGEF10LQ9HCE6 1279 aa13.54□□□□□ -0.24
GFRA1-204ENST00000439649 FLT4P35916 1363 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 EFCAB8A8MWE9 144 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 SNCBQ16143 134 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 CASC4Q6P4E1 433 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 UHRF1BP1Q6BDS2 1440 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 XAB2Q9HCS7 855 aaKnown RBP13.53□□□□□ -0.24
GFRA1-204ENST00000439649 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.53□□□□□ -0.24
GFRA1-204ENST00000439649 OPHN1O60890 802 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 PHEXP78562 749 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 NLRP3Q96P20 1036 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 WWC3Q9ULE0 1092 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 POLR3AO14802 1390 aaPredicted RBP13.53□□□□□ -0.24
GFRA1-204ENST00000439649 ARHGAP42A6NI28 874 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 DPH6Q7L8W6 267 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 FAF1Q9UNN5 650 aaPredicted RBP13.53□□□□□ -0.24
GFRA1-204ENST00000439649 AFG3L2Q9Y4W6 797 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 SHROOM2Q13796 1616 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 PARD3Q8TEW0 1356 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 DNMT1P26358 1616 aaKnown RBP13.53□□□□□ -0.24
GFRA1-204ENST00000439649 XRCC5P13010 732 aaKnown RBP13.53□□□□□ -0.24
GFRA1-204ENST00000439649 ZC4H2Q9NQZ6 224 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 ZNF75DP51815 510 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 LINS1Q8NG48 757 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 CLSTN2Q9H4D0 955 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 CNOT10Q9H9A5 744 aaKnown RBP13.53□□□□□ -0.24
GFRA1-204ENST00000439649 PLS1Q14651 629 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 ANO1Q5XXA6 986 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 TXLNGQ9NUQ3 528 aa13.53□□□□□ -0.24
GFRA1-204ENST00000439649 SYCP2Q9BX26 1530 aa13.52□□□□□ -0.24
GFRA1-204ENST00000439649 CNPY4Q8N129 248 aa13.52□□□□□ -0.24
GFRA1-204ENST00000439649 TRIM6Q9C030 488 aaPredicted RBP13.52□□□□□ -0.24
GFRA1-204ENST00000439649 SUN1O94901 812 aa13.52□□□□□ -0.24
GFRA1-204ENST00000439649 ABCD1P33897 745 aa13.52□□□□□ -0.24
GFRA1-204ENST00000439649 MCM9Q9NXL9 1143 aa13.52□□□□□ -0.24
GFRA1-204ENST00000439649 CCNT1O60563 726 aaKnown RBP13.52□□□□□ -0.24
GFRA1-204ENST00000439649 CCHCR1Q8TD31 782 aa13.52□□□□□ -0.24
GFRA1-204ENST00000439649 AMFRQ9UKV5 643 aa13.52□□□□□ -0.24
GFRA1-204ENST00000439649 AMOTL2Q9Y2J4 779 aa13.52□□□□□ -0.24
GFRA1-204ENST00000439649 AK2P54819 239 aa13.52□□□□□ -0.25
GFRA1-204ENST00000439649 PPP1R21Q6ZMI0 780 aa13.52□□□□□ -0.25
GFRA1-204ENST00000439649 ELF2Q15723 593 aa13.52□□□□□ -0.25
GFRA1-204ENST00000439649 ANKRD20A4Q4UJ75 823 aa13.52□□□□□ -0.25
GFRA1-204ENST00000439649 ANKRD20A8PQ5CZ79 823 aa13.52□□□□□ -0.25
GFRA1-204ENST00000439649 ANKRD20A2Q5SQ80 823 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms