RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ANGEL1Q9UNK9 670 aaKnown RBP17.84■□□□□ 0.45
DHFR-201ENST00000439211 IQSEC3Q9UPP2 1182 aaPredicted RBP17.84■□□□□ 0.45
DHFR-201ENST00000439211 CHUKO15111 745 aa17.84■□□□□ 0.45
DHFR-201ENST00000439211 PNOCQ13519 176 aa17.84■□□□□ 0.45
DHFR-201ENST00000439211 KRT40Q6A162 431 aa17.84■□□□□ 0.45
DHFR-201ENST00000439211 DESI2Q9BSY9 194 aa17.84■□□□□ 0.45
DHFR-201ENST00000439211 OSBPL5Q9H0X9 879 aaPredicted RBP17.84■□□□□ 0.45
DHFR-201ENST00000439211 ADGRL3Q9HAR2 1447 aa17.84■□□□□ 0.45
DHFR-201ENST00000439211 EXOSC10Q01780 885 aaKnown RBP17.84■□□□□ 0.45
DHFR-201ENST00000439211 SSRP1Q08945 709 aaKnown RBP17.84■□□□□ 0.45
DHFR-201ENST00000439211 DHX40Q8IX18 779 aaKnown RBP17.84■□□□□ 0.45
DHFR-201ENST00000439211 YEATS4O95619 227 aa17.83■□□□□ 0.45
DHFR-201ENST00000439211 SCARF1Q14162 830 aa17.83■□□□□ 0.45
DHFR-201ENST00000439211 E2F5Q15329 346 aa17.83■□□□□ 0.45
DHFR-201ENST00000439211 SYNE4Q8N205 404 aa17.83■□□□□ 0.45
DHFR-201ENST00000439211 CAGE1Q8TC20 777 aa17.83■□□□□ 0.45
DHFR-201ENST00000439211 WDR24Q96S15 920 aa17.83■□□□□ 0.45
DHFR-201ENST00000439211 BAG1Q99933 345 aaPredicted RBP17.83■□□□□ 0.45
DHFR-201ENST00000439211 CD248Q9HCU0 757 aa17.83■□□□□ 0.45
DHFR-201ENST00000439211 GOLGA6CA6NDK9 693 aa17.83■□□□□ 0.44
DHFR-201ENST00000439211 GOLGA6DP0CG33 693 aa17.83■□□□□ 0.44
DHFR-201ENST00000439211 ATP1A3P13637 1013 aa17.83■□□□□ 0.44
DHFR-201ENST00000439211 MICALCLQ6ZW33 695 aa17.83■□□□□ 0.44
DHFR-201ENST00000439211 IQCA1Q86XH1 822 aa17.83■□□□□ 0.44
DHFR-201ENST00000439211 CCDC148Q8NFR7 591 aa17.83■□□□□ 0.44
DHFR-201ENST00000439211 GOLGA6AQ9NYA3 693 aa17.83■□□□□ 0.44
DHFR-201ENST00000439211 LRP2BPQ9P2M1 347 aa17.83■□□□□ 0.44
DHFR-201ENST00000439211 ATP2C2O75185 946 aa17.83■□□□□ 0.44
DHFR-201ENST00000439211 ZNF569Q5MCW4 686 aa17.83■□□□□ 0.44
DHFR-201ENST00000439211 FMR1NBQ8N0W7 255 aaPredicted RBP17.83■□□□□ 0.44
DHFR-201ENST00000439211 CNKSR2Q8WXI2 1034 aa17.83■□□□□ 0.44
DHFR-201ENST00000439211 ITGA6P23229 1130 aa17.82■□□□□ 0.44
DHFR-201ENST00000439211 NLRP12P59046 1061 aa17.82■□□□□ 0.44
DHFR-201ENST00000439211 CCDC70Q6NSX1 233 aa17.82■□□□□ 0.44
DHFR-201ENST00000439211 TEX11Q8IYF3 940 aa17.82■□□□□ 0.44
DHFR-201ENST00000439211 MIEF2Q96C03 454 aa17.82■□□□□ 0.44
DHFR-201ENST00000439211 XRN1Q8IZH2 1706 aaKnown RBP17.82■□□□□ 0.44
DHFR-201ENST00000439211 EXOC5O00471 708 aa17.82■□□□□ 0.44
DHFR-201ENST00000439211 ARHGAP6O43182 974 aa17.82■□□□□ 0.44
DHFR-201ENST00000439211 FAM208AQ9UK61 1670 aaKnown RBP17.82■□□□□ 0.44
DHFR-201ENST00000439211 RGPD1P0DJD0 1748 aa17.82■□□□□ 0.44
DHFR-201ENST00000439211 FDPSP14324 419 aaKnown RBP17.82■□□□□ 0.44
DHFR-201ENST00000439211 SRGAP1Q7Z6B7 1085 aa17.82■□□□□ 0.44
DHFR-201ENST00000439211 DNAJC10Q8IXB1 793 aa17.82■□□□□ 0.44
DHFR-201ENST00000439211 CCDC114Q96M63 670 aa17.82■□□□□ 0.44
DHFR-201ENST00000439211 KIF3CO14782 793 aa17.81■□□□□ 0.44
DHFR-201ENST00000439211 NAP1L1P55209 391 aaKnown RBP17.81■□□□□ 0.44
DHFR-201ENST00000439211 MYL5Q02045 173 aa17.81■□□□□ 0.44
DHFR-201ENST00000439211 RBM43Q6ZSC3 357 aaKnown RBP17.81■□□□□ 0.44
DHFR-201ENST00000439211 CMTR1Q8N1G2 835 aaKnown RBP17.81■□□□□ 0.44
DHFR-201ENST00000439211 UBAC1Q9BSL1 405 aa17.81■□□□□ 0.44
DHFR-201ENST00000439211 NACAP1Q9BZK3 213 aa17.81■□□□□ 0.44
DHFR-201ENST00000439211 MTMR7Q9Y216 660 aa17.81■□□□□ 0.44
DHFR-201ENST00000439211 CACNA1FO60840 1977 aa17.81■□□□□ 0.44
DHFR-201ENST00000439211 IRX1P78414 480 aaPredicted RBP17.81■□□□□ 0.44
DHFR-201ENST00000439211 KIRREL3Q8IZU9 778 aa17.81■□□□□ 0.44
DHFR-201ENST00000439211 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.81■□□□□ 0.447e-43■■□□□ 14
DHFR-201ENST00000439211 ARHGAP23Q9P227 1491 aa17.81■□□□□ 0.44
DHFR-201ENST00000439211 IRF6O14896 467 aa17.81■□□□□ 0.44
DHFR-201ENST00000439211 ERCC3P19447 782 aa17.81■□□□□ 0.44
DHFR-201ENST00000439211 MYO1FO00160 1098 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 GNGT1P63211 74 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 INCENPQ9NQS7 918 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 MYO6Q9UM54 1294 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 TMEM94Q12767 1356 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 GOLGA6L7A0A1B0GV03 622 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 MAP3K12Q12852 859 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 A0A1W2PQ27 194 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 A0A1W2PQ64 194 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 A0A1W2PQD8 194 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 CTDSPL2Q05D32 466 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 TCIRG1Q13488 830 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 B4GALNT4Q76KP1 1039 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 PAIP2Q9BPZ3 127 aaKnown RBP17.8■□□□□ 0.44
DHFR-201ENST00000439211 KCNJ14Q9UNX9 436 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 SLIT1O75093 1534 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 FMN2Q9NZ56 1722 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 ZNF532Q9HCE3 1301 aa17.8■□□□□ 0.44
DHFR-201ENST00000439211 KIF23Q02241 960 aaPredicted RBP17.79■□□□□ 0.44
DHFR-201ENST00000439211 RBBP5Q15291 538 aaKnown RBP17.79■□□□□ 0.44
DHFR-201ENST00000439211 ZKSCAN8Q15776 578 aaPredicted RBP17.79■□□□□ 0.44
DHFR-201ENST00000439211 MFSD6Q6ZSS7 791 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 KIAA1328Q86T90 577 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 MIGA1Q8NAN2 632 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 KAT2BQ92831 832 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 KCNH3Q9ULD8 1083 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 TTF1Q15361 905 aaPredicted RBP17.79■□□□□ 0.44
DHFR-201ENST00000439211 MAGEB6Q8N7X4 407 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 GPR108Q9NPR9 543 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 IRS4O14654 1257 aaPredicted RBP17.79■□□□□ 0.44
DHFR-201ENST00000439211 CMA1P23946 247 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 AFMP43652 599 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 STIM1Q13586 685 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 POLR3EQ9NVU0 708 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 DENND2AQ9ULE3 1009 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 CTAGE9A4FU28 777 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 KIF28PB7ZC32 967 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 SKAP2O75563 359 aaPredicted RBP17.79■□□□□ 0.44
DHFR-201ENST00000439211 CCDC175P0C221 793 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 ZNF827Q17R98 1081 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms