RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 C8orf37Q96NL8 207 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 OSBPL5Q9H0X9 879 aaPredicted RBP13.93□□□□□ -0.18
HDAC8-214ENST00000439122 AATFQ9NY61 560 aaKnown RBP eCLIP13.93□□□□□ -0.18
HDAC8-214ENST00000439122 VPS54Q9P1Q0 977 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 USP27XA6NNY8 438 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 ATP1A3P13637 1013 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 PTPREP23469 700 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 HIBADHP31937 336 aaKnown RBP13.93□□□□□ -0.18
HDAC8-214ENST00000439122 FANCCQ00597 558 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 FOXP4Q8IVH2 680 aaPredicted RBP13.93□□□□□ -0.18
HDAC8-214ENST00000439122 ARID3AQ99856 593 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 NARFQ9UHQ1 456 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 HOOK1Q9UJC3 728 aaKnown RBP13.93□□□□□ -0.18
HDAC8-214ENST00000439122 FBXO2Q9UK22 296 aaPredicted RBP13.93□□□□□ -0.18
HDAC8-214ENST00000439122 PCDHA5Q9Y5H7 936 aa13.93□□□□□ -0.18
HDAC8-214ENST00000439122 CASZ1Q86V15 1759 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 SEMA3EO15041 775 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 GNPATO15228 680 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 FOXN1O15353 648 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 POLR2DO15514 142 aaKnown RBP13.92□□□□□ -0.18
HDAC8-214ENST00000439122 MYL5Q02045 173 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 ZNF592Q92610 1267 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 NGLY1Q96IV0 654 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 TRMT1Q9NXH9 659 aaKnown RBP13.92□□□□□ -0.18
HDAC8-214ENST00000439122 CEP131Q9UPN4 1083 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 MYH6P13533 1939 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 PLEKHA8P1O95397 391 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 GLIPR1L2Q4G1C9 344 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 ZNF710Q8N1W2 664 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 HSD3B7Q9H2F3 369 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 JAG2Q9Y219 1238 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 V9GY48 417 aaPredicted RBP13.92□□□□□ -0.18
HDAC8-214ENST00000439122 DUOX1Q9NRD9 1551 aa13.92□□□□□ -0.18
HDAC8-214ENST00000439122 NPHP1O15259 732 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 SERPINC1P01008 464 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 PCP11498 1178 aaKnown RBP13.91□□□□□ -0.18
HDAC8-214ENST00000439122 PRDX5P30044 214 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 EVX2Q03828 476 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 PKN1Q16512 942 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 CEP135Q66GS9 1140 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 TPTE2Q6XPS3 522 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 PDILTQ8N807 584 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 ANKRD2Q9GZV1 360 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 PAXBP1Q9Y5B6 917 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 SCN7AQ01118 1682 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 RPS6KA4O75676 772 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 SFPQP23246 707 aaKnown RBP eCLIP13.91□□□□□ -0.18
HDAC8-214ENST00000439122 KRT2P35908 639 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 TROAPQ12815 778 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 POSTNQ15063 836 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 PTPN14Q15678 1187 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 CCDC150Q8NCX0 1101 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 SHISA4Q96DD7 197 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 CRNKL1Q9BZJ0 848 aaKnown RBP13.91□□□□□ -0.18
HDAC8-214ENST00000439122 RBM28Q9NW13 759 aaKnown RBP13.91□□□□□ -0.18
HDAC8-214ENST00000439122 SRPRBQ9Y5M8 271 aaKnown RBP13.91□□□□□ -0.18
HDAC8-214ENST00000439122 LTBP4Q8N2S1 1624 aa13.91□□□□□ -0.18
HDAC8-214ENST00000439122 FAM205CA6NFA0 338 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 RGL2O15211 777 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 PRPF3O43395 683 aaKnown RBP13.9□□□□□ -0.18
HDAC8-214ENST00000439122 FGRP09769 529 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 UBASH3AP57075 661 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 MDM2Q00987 491 aaPredicted RBP13.9□□□□□ -0.18
HDAC8-214ENST00000439122 FUT2Q10981 343 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 ARMCX5Q6P1M9 558 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 CCAR2Q8N163 923 aaKnown RBP13.9□□□□□ -0.18
HDAC8-214ENST00000439122 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
HDAC8-214ENST00000439122 DCP1AQ9NPI6 582 aaPredicted RBP13.9□□□□□ -0.18
HDAC8-214ENST00000439122 ZNF831Q5JPB2 1677 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 TRIM75PA6NK02 468 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 NMT2O60551 498 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 CALM1P0DP23 149 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 CALM2P0DP24 149 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 CALM3P0DP25 149 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 CFAP100Q494V2 611 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 FAM47AQ5JRC9 791 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 RC3H1Q5TC82 1133 aaKnown RBP13.9□□□□□ -0.18
HDAC8-214ENST00000439122 PHF20Q9BVI0 1012 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 CSRNP2Q9H175 543 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 SERTAD1Q9UHV2 236 aa13.9□□□□□ -0.18
HDAC8-214ENST00000439122 BMP6P22004 513 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 VPS72Q15906 364 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 SLC4A8Q2Y0W8 1093 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 USP49Q70CQ1 688 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 ELOA2Q8IYF1 753 aaPredicted RBP13.89□□□□□ -0.19
HDAC8-214ENST00000439122 CCDC112Q8NEF3 446 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 FANCLQ9NW38 375 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 CCNL1Q9UK58 526 aaPredicted RBP13.89□□□□□ -0.19
HDAC8-214ENST00000439122 RTCBQ9Y3I0 505 aaKnown RBP13.89□□□□□ -0.19
HDAC8-214ENST00000439122 MYH13Q9UKX3 1938 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 CTIFO43310 598 aaKnown RBP13.89□□□□□ -0.19
HDAC8-214ENST00000439122 CBFA2T2O43439 604 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 DDAH1O94760 285 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 PRR29P0C7W0 189 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 CYP2D6P10635 497 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 PDE4BQ07343 736 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 EARS2Q5JPH6 523 aaKnown RBP13.89□□□□□ -0.19
HDAC8-214ENST00000439122 FAM182BQ5T319 152 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 NYAP1Q6ZVC0 841 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 TXNRD3Q86VQ6 643 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms