RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 GCLCP48506 637 aaPredicted RBP22.4■■□□□ 1.18
AC004540.1-201ENST00000439120 FAM110CQ1W6H9 321 aa22.4■■□□□ 1.18
AC004540.1-201ENST00000439120 SH3D19Q5HYK7 790 aa22.4■■□□□ 1.18
AC004540.1-201ENST00000439120 COA7Q96BR5 231 aa22.4■■□□□ 1.18
AC004540.1-201ENST00000439120 ZBTB21Q9ULJ3 1066 aa22.4■■□□□ 1.18
AC004540.1-201ENST00000439120 MAGEB6P1A0A0J9YX57 407 aa22.39■■□□□ 1.17
AC004540.1-201ENST00000439120 GOLIM4O00461 696 aa22.39■■□□□ 1.17
AC004540.1-201ENST00000439120 BACE1P56817 501 aa22.39■■□□□ 1.17
AC004540.1-201ENST00000439120 IRX3P78415 501 aaPredicted RBP22.39■■□□□ 1.17
AC004540.1-201ENST00000439120 SLC9C2Q5TAH2 1124 aa22.39■■□□□ 1.17
AC004540.1-201ENST00000439120 TTC6Q86TZ1 520 aa22.39■■□□□ 1.17
AC004540.1-201ENST00000439120 SIRT2Q8IXJ6 389 aa22.39■■□□□ 1.17
AC004540.1-201ENST00000439120 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.39■■□□□ 1.17
AC004540.1-201ENST00000439120 ASCC2Q9H1I8 757 aaPredicted RBP22.39■■□□□ 1.17
AC004540.1-201ENST00000439120 GABRQQ9UN88 632 aa22.39■■□□□ 1.17
AC004540.1-201ENST00000439120 C19orf81C9J6K1 198 aa22.38■■□□□ 1.17
AC004540.1-201ENST00000439120 USP17L10C9JJH3 530 aa22.38■■□□□ 1.17
AC004540.1-201ENST00000439120 FLT3LGP49771 235 aa22.38■■□□□ 1.17
AC004540.1-201ENST00000439120 MTFR1Q15390 333 aa22.38■■□□□ 1.17
AC004540.1-201ENST00000439120 NKX2-3Q8TAU0 364 aa22.38■■□□□ 1.17
AC004540.1-201ENST00000439120 SERPINB13Q9UIV8 391 aa22.38■■□□□ 1.17
AC004540.1-201ENST00000439120 TAOK2Q9UL54 1235 aa22.38■■□□□ 1.17
AC004540.1-201ENST00000439120 ADCY3O60266 1144 aa22.37■■□□□ 1.17
AC004540.1-201ENST00000439120 CCL5P13501 91 aa22.37■■□□□ 1.17
AC004540.1-201ENST00000439120 PDE6AP16499 860 aa22.37■■□□□ 1.17
AC004540.1-201ENST00000439120 PDE3AQ14432 1141 aa22.37■■□□□ 1.17
AC004540.1-201ENST00000439120 CRNKL1Q9BZJ0 848 aaKnown RBP22.37■■□□□ 1.17
AC004540.1-201ENST00000439120 MKI67P46013 3256 aaKnown RBP22.37■■□□□ 1.17
AC004540.1-201ENST00000439120 JAG1P78504 1218 aa22.36■■□□□ 1.17
AC004540.1-201ENST00000439120 RNF208Q9H0X6 261 aa22.36■■□□□ 1.17
AC004540.1-201ENST00000439120 EHD4Q9H223 541 aa22.36■■□□□ 1.17
AC004540.1-201ENST00000439120 ZNF532Q9HCE3 1301 aa22.35■■□□□ 1.17
AC004540.1-201ENST00000439120 NAV1Q8NEY1 1877 aa22.35■■□□□ 1.17
AC004540.1-201ENST00000439120 SLC34A2O95436 690 aa22.35■■□□□ 1.17
AC004540.1-201ENST00000439120 GH2P01242 217 aa22.35■■□□□ 1.17
AC004540.1-201ENST00000439120 POLR3DP05423 398 aaPredicted RBP22.35■■□□□ 1.17
AC004540.1-201ENST00000439120 SHROOM1Q2M3G4 852 aaPredicted RBP22.35■■□□□ 1.17
AC004540.1-201ENST00000439120 GCC1Q96CN9 775 aa22.35■■□□□ 1.17
AC004540.1-201ENST00000439120 FEZ1Q99689 392 aa22.35■■□□□ 1.17
AC004540.1-201ENST00000439120 RIOK1Q9BRS2 568 aaKnown RBP22.35■■□□□ 1.17
AC004540.1-201ENST00000439120 IRF5Q13568 498 aa22.34■■□□□ 1.17
AC004540.1-201ENST00000439120 CERKLQ49MI3 558 aaPredicted RBP22.34■■□□□ 1.17
AC004540.1-201ENST00000439120 C20orf194Q5TEA3 1177 aa22.34■■□□□ 1.17
AC004540.1-201ENST00000439120 PXYLP1Q8TE99 480 aa22.34■■□□□ 1.17
AC004540.1-201ENST00000439120 PAG1Q9NWQ8 432 aa22.34■■□□□ 1.17
AC004540.1-201ENST00000439120 ELNP15502 786 aa22.33■■□□□ 1.17
AC004540.1-201ENST00000439120 RAB3GAP1Q15042 981 aa22.33■■□□□ 1.17
AC004540.1-201ENST00000439120 ABCB5Q2M3G0 1257 aa22.33■■□□□ 1.17
AC004540.1-201ENST00000439120 TATDN1Q6P1N9 297 aa22.33■■□□□ 1.17
AC004540.1-201ENST00000439120 USP17L2Q6R6M4 530 aa22.33■■□□□ 1.17
AC004540.1-201ENST00000439120 LRRCC1Q9C099 1032 aa22.33■■□□□ 1.17
AC004540.1-201ENST00000439120 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.33■■□□□ 1.17
AC004540.1-201ENST00000439120 BOLA2Q9H3K6 86 aa22.33■■□□□ 1.17
AC004540.1-201ENST00000439120 CABP5Q9NP86 173 aa22.33■■□□□ 1.17
AC004540.1-201ENST00000439120 INHAP05111 366 aa22.32■■□□□ 1.16
AC004540.1-201ENST00000439120 GJB1P08034 283 aa22.32■■□□□ 1.16
AC004540.1-201ENST00000439120 HOXA7P31268 230 aaPredicted RBP22.32■■□□□ 1.16
AC004540.1-201ENST00000439120 MCM9Q9NXL9 1143 aa22.32■■□□□ 1.16
AC004540.1-201ENST00000439120 ATP5JP18859 108 aa22.31■■□□□ 1.16
AC004540.1-201ENST00000439120 GJA8P48165 433 aa22.31■■□□□ 1.16
AC004540.1-201ENST00000439120 HERVK_113P62684 666 aa22.31■■□□□ 1.16
AC004540.1-201ENST00000439120 ZYXQ15942 572 aaKnown RBP22.31■■□□□ 1.16
AC004540.1-201ENST00000439120 CCAR1Q8IX12 1150 aaKnown RBP22.31■■□□□ 1.16
AC004540.1-201ENST00000439120 EDC3Q96F86 508 aaKnown RBP22.31■■□□□ 1.16
AC004540.1-201ENST00000439120 UNC93B1Q9H1C4 597 aa22.31■■□□□ 1.16
AC004540.1-201ENST00000439120 DDX60LQ5H9U9 1706 aaKnown RBP22.31■■□□□ 1.16
AC004540.1-201ENST00000439120 PLCD1P51178 756 aa22.3■■□□□ 1.16
AC004540.1-201ENST00000439120 GPRC5AQ8NFJ5 357 aa22.3■■□□□ 1.16
AC004540.1-201ENST00000439120 GTF3C2Q8WUA4 911 aaPredicted RBP22.3■■□□□ 1.16
AC004540.1-201ENST00000439120 SHISA4Q96DD7 197 aa22.3■■□□□ 1.16
AC004540.1-201ENST00000439120 P2RX7Q99572 595 aaKnown RBP22.3■■□□□ 1.16
AC004540.1-201ENST00000439120 MORF4L1Q9UBU8 362 aa22.3■■□□□ 1.16
AC004540.1-201ENST00000439120 TCRBV5S4A2TA0A5A2 114 aa22.29■■□□□ 1.16
AC004540.1-201ENST00000439120 USP14P54578 494 aa22.29■■□□□ 1.16
AC004540.1-201ENST00000439120 LCORLQ8N3X6 602 aa22.29■■□□□ 1.16
AC004540.1-201ENST00000439120 U2AF1L4Q8WU68 220 aaKnown RBP22.29■■□□□ 1.16
AC004540.1-201ENST00000439120 SDR42E1Q8WUS8 393 aa22.29■■□□□ 1.16
AC004540.1-201ENST00000439120 HAUS7Q99871 368 aa22.29■■□□□ 1.16
AC004540.1-201ENST00000439120 EMILIN3Q9NT22 766 aa22.29■■□□□ 1.16
AC004540.1-201ENST00000439120 MPHOSPH10O00566 681 aaKnown RBP22.28■■□□□ 1.16
AC004540.1-201ENST00000439120 SHMT1P34896 483 aa22.28■■□□□ 1.16
AC004540.1-201ENST00000439120 ADD2P35612 726 aa22.28■■□□□ 1.16
AC004540.1-201ENST00000439120 PAGR1Q9BTK6 254 aa22.28■■□□□ 1.16
AC004540.1-201ENST00000439120 ARMT1Q9H993 441 aa22.28■■□□□ 1.16
AC004540.1-201ENST00000439120 DOCK3Q8IZD9 2030 aa22.28■■□□□ 1.16
AC004540.1-201ENST00000439120 MBD4O95243 580 aa22.27■■□□□ 1.16
AC004540.1-201ENST00000439120 ZSCAN25Q6NSZ9 544 aa22.27■■□□□ 1.16
AC004540.1-201ENST00000439120 AMOTL1Q8IY63 956 aa22.27■■□□□ 1.16
AC004540.1-201ENST00000439120 DDRGK1Q96HY6 314 aa22.27■■□□□ 1.16
AC004540.1-201ENST00000439120 CWC22Q9HCG8 908 aaKnown RBP22.27■■□□□ 1.16
AC004540.1-201ENST00000439120 DCP1AQ9NPI6 582 aaPredicted RBP22.27■■□□□ 1.16
AC004540.1-201ENST00000439120 USP17L15C9J2P7 530 aa22.26■■□□□ 1.15
AC004540.1-201ENST00000439120 USP17L13C9JLJ4 530 aa22.26■■□□□ 1.15
AC004540.1-201ENST00000439120 USP17L11C9JVI0 530 aa22.26■■□□□ 1.15
AC004540.1-201ENST00000439120 USP17L18D6R9N7 530 aa22.26■■□□□ 1.15
AC004540.1-201ENST00000439120 USP17L22D6RA61 530 aa22.26■■□□□ 1.15
AC004540.1-201ENST00000439120 USP17L17D6RBQ6 530 aa22.26■■□□□ 1.15
AC004540.1-201ENST00000439120 USP17L19D6RCP7 530 aa22.26■■□□□ 1.15
AC004540.1-201ENST00000439120 USP17L20D6RJB6 530 aa22.26■■□□□ 1.15
AC004540.1-201ENST00000439120 SMARCA5O60264 1052 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms