RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 FAM155AB1AL88 458 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P18-201ENST00000438801 GNA15P30679 374 aa5.51□□□□□ -1.53
HMGB1P18-201ENST00000438801 CAP2P40123 477 aa5.51□□□□□ -1.53
HMGB1P18-201ENST00000438801 CDK8P49336 464 aa5.51□□□□□ -1.53
HMGB1P18-201ENST00000438801 ZNF124Q15973 351 aa5.51□□□□□ -1.53
HMGB1P18-201ENST00000438801 NKG7Q16617 165 aa5.51□□□□□ -1.53
HMGB1P18-201ENST00000438801 SFRP5Q5T4F7 317 aa5.51□□□□□ -1.53
HMGB1P18-201ENST00000438801 ZSWIM9Q86XI8 627 aa5.51□□□□□ -1.53
HMGB1P18-201ENST00000438801 HID1Q8IV36 788 aa5.51□□□□□ -1.53
HMGB1P18-201ENST00000438801 HSPA12BQ96MM6 686 aa5.51□□□□□ -1.53
HMGB1P18-201ENST00000438801 SEMA3GQ9NS98 782 aa5.51□□□□□ -1.53
HMGB1P18-201ENST00000438801 LMCD1Q9NZU5 365 aa5.51□□□□□ -1.53
HMGB1P18-201ENST00000438801 CNTNAP4Q9C0A0 1308 aa5.5□□□□□ -1.53
HMGB1P18-201ENST00000438801 ZNF865P0CJ78 1059 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P18-201ENST00000438801 LMNB1P20700 586 aa5.5□□□□□ -1.53
HMGB1P18-201ENST00000438801 RPS26P62854 115 aaKnown RBP5.5□□□□□ -1.53
HMGB1P18-201ENST00000438801 CCDC85BQ15834 202 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P18-201ENST00000438801 CDKAL1Q5VV42 579 aa5.5□□□□□ -1.53
HMGB1P18-201ENST00000438801 C22orf34Q6ZV56 151 aa5.5□□□□□ -1.53
HMGB1P18-201ENST00000438801 MFSD4AQ8N468 514 aa5.5□□□□□ -1.53
HMGB1P18-201ENST00000438801 RIN3Q8TB24 985 aa5.5□□□□□ -1.53
HMGB1P18-201ENST00000438801 CTNND2Q9UQB3 1225 aa5.5□□□□□ -1.53
HMGB1P18-201ENST00000438801 ZNF503-AS2A6NEH8 195 aa5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 H3BS24 57 aa5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 PRPF40AO75400 957 aaKnown RBP5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 FGD1P98174 961 aa5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 SEPT6Q14141 434 aa5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 PKN1Q16512 942 aa5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 KCNMB1Q16558 191 aa5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 PRAMEF13Q5VWM6 474 aa5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 LETMD1Q6P1Q0 360 aa5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 KSR1Q8IVT5 923 aa5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 CARS2Q9HA77 564 aaKnown RBP5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 ATP13A1Q9HD20 1204 aa5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 FAM53CQ9NYF3 392 aa5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 PCDHB5Q9Y5E4 795 aa5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 AK5Q9Y6K8 562 aa5.49□□□□□ -1.53
HMGB1P18-201ENST00000438801 LRRC10BA6NIK2 292 aa5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 DBX1A6NMT0 343 aa5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 PATL2C9JE40 543 aaKnown RBP5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 GFRA2O00451 464 aa5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 CST3P01034 146 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 GRK4P32298 578 aa5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 AFMP43652 599 aa5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 ZNF746Q6NUN9 644 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 NPAS4Q8IUM7 802 aa5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 XAGE3Q8WTP9 111 aa5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 FAM84AQ96KN4 292 aa5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 SLC38A3Q99624 504 aa5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 TRAIPQ9BWF2 469 aa5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 ST14Q9Y5Y6 855 aa5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 CAPN6Q9Y6Q1 641 aa5.48□□□□□ -1.53
HMGB1P18-201ENST00000438801 CBX7O95931 251 aa5.47□□□□□ -1.53
HMGB1P18-201ENST00000438801 MESP2Q0VG99 397 aa5.47□□□□□ -1.53
HMGB1P18-201ENST00000438801 MAP3K11Q16584 847 aa5.47□□□□□ -1.53
HMGB1P18-201ENST00000438801 FYB2Q5VWT5 728 aa5.47□□□□□ -1.53
HMGB1P18-201ENST00000438801 AGMOQ6ZNB7 445 aa5.47□□□□□ -1.53
HMGB1P18-201ENST00000438801 THAP5Q7Z6K1 395 aa5.47□□□□□ -1.53
HMGB1P18-201ENST00000438801 DUSP9Q99956 384 aaKnown RBP5.47□□□□□ -1.53
HMGB1P18-201ENST00000438801 RNF19AQ9NV58 838 aa5.47□□□□□ -1.53
HMGB1P18-201ENST00000438801 TACC3Q9Y6A5 838 aa5.47□□□□□ -1.53
HMGB1P18-201ENST00000438801 ADGRL1O94910 1474 aa5.46□□□□□ -1.53
HMGB1P18-201ENST00000438801 CYP7A1P22680 504 aa5.46□□□□□ -1.54
HMGB1P18-201ENST00000438801 LIG3P49916 1009 aa5.46□□□□□ -1.54
HMGB1P18-201ENST00000438801 MLANAQ16655 118 aa5.46□□□□□ -1.54
HMGB1P18-201ENST00000438801 EAPPQ56P03 285 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P18-201ENST00000438801 COX4I2Q96KJ9 171 aa5.46□□□□□ -1.54
HMGB1P18-201ENST00000438801 C19orf73Q9NVV2 129 aa5.46□□□□□ -1.54
HMGB1P18-201ENST00000438801 TJP2Q9UDY2 1190 aa5.46□□□□□ -1.54
HMGB1P18-201ENST00000438801 SRCAPQ6ZRS2 3230 aa5.46□□□□□ -1.54
HMGB1P18-201ENST00000438801 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P18-201ENST00000438801 PGRP06401 933 aa5.45□□□□□ -1.54
HMGB1P18-201ENST00000438801 GLI1P08151 1106 aa5.45□□□□□ -1.54
HMGB1P18-201ENST00000438801 KIR3DL1P43629 444 aa5.45□□□□□ -1.54
HMGB1P18-201ENST00000438801 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
HMGB1P18-201ENST00000438801 CDH24Q86UP0 819 aa5.45□□□□□ -1.54
HMGB1P18-201ENST00000438801 MRPL41Q8IXM3 137 aaKnown RBP5.45□□□□□ -1.54
HMGB1P18-201ENST00000438801 UBE2FQ969M7 185 aa5.45□□□□□ -1.54
HMGB1P18-201ENST00000438801 LIN37Q96GY3 246 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P18-201ENST00000438801 KIRREL1Q96J84 757 aa5.45□□□□□ -1.54
HMGB1P18-201ENST00000438801 DPH2Q9BQC3 489 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P18-201ENST00000438801 MIR1-1HGQ9H1L0 117 aa5.45□□□□□ -1.54
HMGB1P18-201ENST00000438801 ANKRD33BA6NCL7 494 aa5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 RBAK-RBAKDNI3L0D1 243 aa5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 TFE3P19532 575 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 GDNFP39905 211 aa5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 PDE4BQ07343 736 aa5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 TNK2Q07912 1038 aa5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 TSNAXIP1Q2TAA8 658 aa5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 TMEM67Q5HYA8 995 aa5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 MEI1Q5TIA1 1274 aa5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 SLC6A19Q695T7 634 aa5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 BHLHE22Q8NFJ8 381 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 TMEM87BQ96K49 555 aa5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 ALPK1Q96QP1 1244 aa5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 ZSWIM5Q9P217 1185 aa5.44□□□□□ -1.54
HMGB1P18-201ENST00000438801 RLBP1P12271 317 aa5.43□□□□□ -1.54
HMGB1P18-201ENST00000438801 ETV3P41162 512 aa5.43□□□□□ -1.54
HMGB1P18-201ENST00000438801 MPZL3Q6UWV2 235 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms