RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 CST3P01034 146 aaPredicted RBP5.95□□□□□ -1.46
LSM1P1-201ENST00000438629 NTF4P34130 210 aa5.95□□□□□ -1.46
LSM1P1-201ENST00000438629 SPOCK3Q9BQ16 436 aa5.95□□□□□ -1.46
LSM1P1-201ENST00000438629 TJP2Q9UDY2 1190 aa5.95□□□□□ -1.46
LSM1P1-201ENST00000438629 SLC22A31A6NKX4 558 aa5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 ITGB2P05107 769 aa5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 CYP27A1Q02318 531 aa5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 DOC2BQ14184 412 aa5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 SLBPQ14493 270 aaKnown RBP eCLIP5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 INTS3Q68E01 1043 aaKnown RBP5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 SEZ6L2Q6UXD5 910 aa5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 SLFN12Q8IYM2 578 aa5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 FAM13CQ8NE31 585 aa5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 TMEM40Q8WWA1 233 aa5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 ARMC5Q96C12 935 aa5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 ACSF2Q96CM8 615 aaPredicted RBP5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 DRC1Q96MC2 740 aa5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 C7orf69Q9H7B7 122 aa5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 PPT2Q9UMR5 302 aa5.94□□□□□ -1.46
LSM1P1-201ENST00000438629 MEIS3P2A8K0S8 358 aa5.93□□□□□ -1.46
LSM1P1-201ENST00000438629 CCNFP41002 786 aa5.93□□□□□ -1.46
LSM1P1-201ENST00000438629 GIPRP48546 466 aa5.93□□□□□ -1.46
LSM1P1-201ENST00000438629 CHMP4BP1P59074 171 aa5.93□□□□□ -1.46
LSM1P1-201ENST00000438629 CYP27C1Q4G0S4 372 aa5.93□□□□□ -1.46
LSM1P1-201ENST00000438629 CDCP2Q5VXM1 449 aa5.93□□□□□ -1.46
LSM1P1-201ENST00000438629 RNF43Q68DV7 783 aa5.93□□□□□ -1.46
LSM1P1-201ENST00000438629 GPAT2Q6NUI2 795 aa5.93□□□□□ -1.46
LSM1P1-201ENST00000438629 CCDC74BQ96LY2 380 aa5.93□□□□□ -1.46
LSM1P1-201ENST00000438629 TM9SF2Q99805 663 aa5.93□□□□□ -1.46
LSM1P1-201ENST00000438629 FBRSQ9HAH7 460 aa5.93□□□□□ -1.46
LSM1P1-201ENST00000438629 KLHL3Q9UH77 587 aa5.93□□□□□ -1.46
LSM1P1-201ENST00000438629 HMX2A2RU54 273 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 PROCP04070 461 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 FGRP09769 529 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 RAG1P15918 1043 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 CYP7A1P22680 504 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 NKG7Q16617 165 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 TNNI3KQ59H18 835 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 SOGA3Q5TF21 947 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 PRAMEF13Q5VWM6 474 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 DUSP27Q5VZP5 1158 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 ZNF746Q6NUN9 644 aaPredicted RBP5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 OGFOD3Q6PK18 319 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 ARMCX6Q7L4S7 300 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 MCF2L2Q86YR7 1114 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 TAB3Q8N5C8 712 aaPredicted RBP5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 ATG4CQ96DT6 458 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 TBC1D32Q96NH3 1257 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 DBNDD2Q9BQY9 259 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 HIRIP3Q9BW71 556 aaPredicted RBP5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 CNNM2Q9H8M5 875 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 LGR6Q9HBX8 967 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 PRDM10Q9NQV6 1147 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 C1GALT1Q9NS00 363 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 SLC12A7Q9Y666 1083 aa5.92□□□□□ -1.46
LSM1P1-201ENST00000438629 CHURC1-FNTBB4DL54 471 aa5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 STK10O94804 968 aaKnown RBP5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 NME1P15531 152 aaKnown RBP5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 GBP1P32455 592 aa5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 CPSF6Q16630 551 aaKnown RBP eCLIP5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 ARSHQ5FYA8 562 aa5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 NLRC3Q7RTR2 1065 aa5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 ZAR1Q86SH2 424 aa5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 PHACTR4Q8IZ21 702 aa5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 C19orf47Q8N9M1 422 aaKnown RBP5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 CYB5D2Q8WUJ1 264 aa5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 COX4I2Q96KJ9 171 aa5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 PSMG3-AS1Q96PY0 264 aa5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 METTL22Q9BUU2 404 aaPredicted RBP5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 ATG3Q9NT62 314 aa5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 PPP1R1BQ9UD71 204 aaPredicted RBP5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 R3HCC1Q9Y3T6 440 aaKnown RBP5.91□□□□□ -1.46
LSM1P1-201ENST00000438629 UPK3BL1B0FP48 263 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 UPK3BL2E5RIL1 263 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 TNFRSF10CO14798 259 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 RGS13O14921 159 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 DYNC1LI2O43237 492 aaPredicted RBP5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 IGLV1-40P01703 118 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 ETV3P41162 512 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 CASP7P55210 303 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 NFIAQ12857 509 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 RSPO4Q2I0M5 234 aaPredicted RBP5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 NKAPLQ5M9Q1 402 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 OVOS1Q6IE37 1185 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 LETMD1Q6P1Q0 360 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 CCDC81Q6ZN84 652 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 ANAPC16Q96DE5 110 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 SHDQ96IW2 340 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 DHRS1Q96LJ7 313 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 GTF2IRD1Q9UHL9 959 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 CEP131Q9UPN4 1083 aa5.9□□□□□ -1.46
LSM1P1-201ENST00000438629 FSTP19883 344 aa5.89□□□□□ -1.47
LSM1P1-201ENST00000438629 GUCY2CP25092 1073 aa5.89□□□□□ -1.47
LSM1P1-201ENST00000438629 GTF2F1P35269 517 aaKnown RBP eCLIP5.89□□□□□ -1.47
LSM1P1-201ENST00000438629 CDK5R2Q13319 367 aa5.89□□□□□ -1.47
LSM1P1-201ENST00000438629 UBE3DQ7Z6J8 389 aa5.89□□□□□ -1.47
LSM1P1-201ENST00000438629 LSRQ86X29 649 aaPredicted RBP5.89□□□□□ -1.47
LSM1P1-201ENST00000438629 CKAP2LQ8IYA6 745 aa5.89□□□□□ -1.47
LSM1P1-201ENST00000438629 UBXN4Q92575 508 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 285.7 ms