RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 RNF214Q8ND24 703 aa5.01□□□□□ -1.61
HMGB1P12-201ENST00000438594 BCL2L13Q9BXK5 485 aa5.01□□□□□ -1.61
HMGB1P12-201ENST00000438594 TMEM39AQ9NV64 488 aa5.01□□□□□ -1.61
HMGB1P12-201ENST00000438594 FAM155AB1AL88 458 aaPredicted RBP5□□□□□ -1.61
HMGB1P12-201ENST00000438594 IGF2BP3O00425 579 aaKnown RBP eCLIP5□□□□□ -1.61
HMGB1P12-201ENST00000438594 GRM2Q14416 872 aa5□□□□□ -1.61
HMGB1P12-201ENST00000438594 NKPD1Q17RQ9 610 aa5□□□□□ -1.61
HMGB1P12-201ENST00000438594 CDKAL1Q5VV42 579 aa5□□□□□ -1.61
HMGB1P12-201ENST00000438594 CDC37L1Q7L3B6 337 aa5□□□□□ -1.61
HMGB1P12-201ENST00000438594 DPH6Q7L8W6 267 aa5□□□□□ -1.61
HMGB1P12-201ENST00000438594 PKNOX2Q96KN3 472 aa5□□□□□ -1.61
HMGB1P12-201ENST00000438594 NIF3L1Q9GZT8 377 aa5□□□□□ -1.61
HMGB1P12-201ENST00000438594 KCNK12Q9HB15 430 aa5□□□□□ -1.61
HMGB1P12-201ENST00000438594 PRDM5Q9NQX1 630 aaPredicted RBP5□□□□□ -1.61
HMGB1P12-201ENST00000438594 PPP4R2Q9NY27 417 aa5□□□□□ -1.61
HMGB1P12-201ENST00000438594 PITPNM2Q9BZ72 1349 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 TCAF2A6NFQ2 919 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 DCDC2CA8MYV0 355 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 EIF1AYO14602 144 aaKnown RBP4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 MAFGO15525 162 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 INHBBP09529 407 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 VAMP1P23763 118 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 CLCN7P51798 805 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 ERVK-24P63145 666 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 SETQ01105 290 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 HSP90AB4PQ58FF6 505 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 ZC3H12AQ5D1E8 599 aaKnown RBP4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 LCE5AQ5TCM9 118 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 CIAPIN1Q6FI81 312 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 TTLL10Q6ZVT0 673 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 STK35Q8TDR2 534 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 GPBAR1Q8TDU6 330 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 EPS8L3Q8TE67 593 aaKnown RBP4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 GIPC2Q8TF65 315 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 FOXQ1Q9C009 403 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 ATP13A1Q9HD20 1204 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 DCP1AQ9NPI6 582 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 AKAP2Q9Y2D5 859 aa4.99□□□□□ -1.61
HMGB1P12-201ENST00000438594 ICMTO60725 284 aa4.98□□□□□ -1.61
HMGB1P12-201ENST00000438594 ARNTP27540 789 aa4.98□□□□□ -1.61
HMGB1P12-201ENST00000438594 CTSWP56202 376 aa4.98□□□□□ -1.61
HMGB1P12-201ENST00000438594 GORABQ5T7V8 394 aa4.98□□□□□ -1.61
HMGB1P12-201ENST00000438594 PHLDB3Q6NSJ2 640 aa4.98□□□□□ -1.61
HMGB1P12-201ENST00000438594 ATG14Q6ZNE5 492 aa4.98□□□□□ -1.61
HMGB1P12-201ENST00000438594 FAM214BQ7L5A3 538 aa4.98□□□□□ -1.61
HMGB1P12-201ENST00000438594 PDZD3Q86UT5 571 aa4.98□□□□□ -1.61
HMGB1P12-201ENST00000438594 HSPA12BQ96MM6 686 aa4.98□□□□□ -1.61
HMGB1P12-201ENST00000438594 TPX2Q9ULW0 747 aaKnown RBP4.98□□□□□ -1.61
HMGB1P12-201ENST00000438594 H3BS24 57 aa4.97□□□□□ -1.61
HMGB1P12-201ENST00000438594 ANAPC15P60006 121 aa4.97□□□□□ -1.61
HMGB1P12-201ENST00000438594 KCNA10Q16322 511 aa4.97□□□□□ -1.61
HMGB1P12-201ENST00000438594 UBE3DQ7Z6J8 389 aa4.97□□□□□ -1.61
HMGB1P12-201ENST00000438594 C12orf40Q86WS4 652 aa4.97□□□□□ -1.61
HMGB1P12-201ENST00000438594 GPATCH3Q96I76 525 aa4.97□□□□□ -1.61
HMGB1P12-201ENST00000438594 PLCD4Q9BRC7 762 aa4.97□□□□□ -1.61
HMGB1P12-201ENST00000438594 EMILIN2Q9BXX0 1053 aa4.97□□□□□ -1.61
HMGB1P12-201ENST00000438594 DNAJC25Q9H1X3 360 aa4.97□□□□□ -1.61
HMGB1P12-201ENST00000438594 EPB41L4BQ9H329 900 aa4.97□□□□□ -1.61
HMGB1P12-201ENST00000438594 NLRP2Q9NX02 1062 aa4.97□□□□□ -1.61
HMGB1P12-201ENST00000438594 NUAK1O60285 661 aa4.96□□□□□ -1.62
HMGB1P12-201ENST00000438594 EOMESO95936 686 aa4.96□□□□□ -1.62
HMGB1P12-201ENST00000438594 RECKO95980 971 aa4.96□□□□□ -1.62
HMGB1P12-201ENST00000438594 KRT1P04264 644 aa4.96□□□□□ -1.62
HMGB1P12-201ENST00000438594 NME2P22392 152 aa4.96□□□□□ -1.62
HMGB1P12-201ENST00000438594 GDNFP39905 211 aa4.96□□□□□ -1.62
HMGB1P12-201ENST00000438594 SERPINB4P48594 390 aa4.96□□□□□ -1.62
HMGB1P12-201ENST00000438594 MPRIPQ6WCQ1 1025 aa4.96□□□□□ -1.62
HMGB1P12-201ENST00000438594 NOP9Q86U38 636 aaKnown RBP4.96□□□□□ -1.62
HMGB1P12-201ENST00000438594 NPAS4Q8IUM7 802 aa4.96□□□□□ -1.62
HMGB1P12-201ENST00000438594 SLAMF8Q9P0V8 285 aa4.96□□□□□ -1.62
HMGB1P12-201ENST00000438594 EGFL7Q9UHF1 273 aa4.96□□□□□ -1.62
HMGB1P12-201ENST00000438594 SBNO2Q9Y2G9 1366 aa4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 PRR33A8MZF0 331 aa4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 CENPBP07199 599 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 RAC2P15153 192 aa4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 PI16Q6UXB8 463 aa4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 ABHD4Q8TB40 342 aa4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 KCNN1Q92952 543 aa4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 ELMO3Q96BJ8 720 aa4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 CCDC120Q96HB5 630 aa4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 CSRNP1Q96S65 589 aa4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 FAM129BQ96TA1 746 aa4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 C19orf73Q9NVV2 129 aa4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 KLHL42Q9P2K6 505 aa4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 MAPK8IP1Q9UQF2 711 aa4.95□□□□□ -1.62
HMGB1P12-201ENST00000438594 ETV2O00321 342 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 GPR182O15218 404 aa4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 CBX7O95931 251 aa4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 SFRP5Q5T4F7 317 aa4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 CCDC181Q5TID7 509 aa4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 SPTY2D1Q68D10 685 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 B4GALNT3Q6L9W6 998 aa4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 ARMCX6Q7L4S7 300 aa4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 TTC6Q86TZ1 520 aa4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 MFSD4AQ8N468 514 aa4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 ALPK1Q96QP1 1244 aa4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 MIPEPQ99797 713 aa4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 BCO2Q9BYV7 579 aa4.94□□□□□ -1.62
HMGB1P12-201ENST00000438594 IRF2BPLQ9H1B7 796 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms