RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 DIAPH1O60610 1272 aaKnown RBP8.31□□□□□ -1.08
SPEN-202ENST00000438066 NME2P22392 152 aa8.31□□□□□ -1.08
SPEN-202ENST00000438066 MASP1P48740 699 aa8.31□□□□□ -1.08
SPEN-202ENST00000438066 TAF7LQ5H9L4 462 aa8.31□□□□□ -1.08
SPEN-202ENST00000438066 LLGL2Q6P1M3 1020 aa8.31□□□□□ -1.08
SPEN-202ENST00000438066 SULF2Q8IWU5 870 aa8.31□□□□□ -1.08
SPEN-202ENST00000438066 ABHD17AQ96GS6 310 aa8.31□□□□□ -1.08
SPEN-202ENST00000438066 EFCC1Q9HA90 598 aa8.31□□□□□ -1.08
SPEN-202ENST00000438066 NOS1P29475 1434 aa8.31□□□□□ -1.08
SPEN-202ENST00000438066 NRXN1Q9ULB1 1477 aa8.31□□□□□ -1.08
SPEN-202ENST00000438066 PREX1Q8TCU6 1659 aa8.3□□□□□ -1.08
SPEN-202ENST00000438066 A0A0G2JS52 829 aa8.3□□□□□ -1.08
SPEN-202ENST00000438066 HCLS1P14317 486 aaPredicted RBP8.3□□□□□ -1.08
SPEN-202ENST00000438066 CASP7P55210 303 aa8.3□□□□□ -1.08
SPEN-202ENST00000438066 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.3□□□□□ -1.08
SPEN-202ENST00000438066 C6orf15Q6UXA7 325 aaPredicted RBP8.3□□□□□ -1.08
SPEN-202ENST00000438066 TRIM46Q7Z4K8 759 aa8.3□□□□□ -1.08
SPEN-202ENST00000438066 THAP3Q8WTV1 239 aaPredicted RBP8.3□□□□□ -1.08
SPEN-202ENST00000438066 GAL3ST3Q96A11 431 aa8.3□□□□□ -1.08
SPEN-202ENST00000438066 GHRHP01286 108 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 GPLD1P80108 840 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 PTPN11Q06124 597 aaPredicted RBP8.29□□□□□ -1.08
SPEN-202ENST00000438066 PCDH1Q08174 1060 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 LRRC14Q15048 493 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 CEP135Q66GS9 1140 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 SPNS2Q8IVW8 549 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 RBBP8NLQ8NC74 664 aaPredicted RBP8.29□□□□□ -1.08
SPEN-202ENST00000438066 BSNDQ8WZ55 320 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 TMX1Q9H3N1 280 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 CHPF2Q9P2E5 772 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 COL17A1Q9UMD9 1497 aaPredicted RBP8.29□□□□□ -1.08
SPEN-202ENST00000438066 PTCH2Q9Y6C5 1203 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 ASMTLO95671 621 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 B3GALT4O96024 378 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 S100BP04271 92 aaPredicted RBP8.29□□□□□ -1.08
SPEN-202ENST00000438066 SSRP1Q08945 709 aaKnown RBP8.29□□□□□ -1.08
SPEN-202ENST00000438066 TBC1D8BQ0IIM8 1120 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 ZNF423Q2M1K9 1284 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 ANTXR1Q9H6X2 564 aa8.29□□□□□ -1.08
SPEN-202ENST00000438066 POLR3KQ9Y2Y1 108 aaPredicted RBP8.29□□□□□ -1.08
SPEN-202ENST00000438066 EIF2AK2P19525 551 aaKnown RBP8.28□□□□□ -1.08
SPEN-202ENST00000438066 MPRIPQ6WCQ1 1025 aa8.28□□□□□ -1.08
SPEN-202ENST00000438066 EHMT1Q9H9B1 1298 aa8.28□□□□□ -1.08
SPEN-202ENST00000438066 SUGT1Q9Y2Z0 365 aa8.28□□□□□ -1.08
SPEN-202ENST00000438066 CD2APQ9Y5K6 639 aa8.28□□□□□ -1.08
SPEN-202ENST00000438066 ST20-MTHFSA0A0A6YYL1 179 aa8.27□□□□□ -1.09
SPEN-202ENST00000438066 EIF5BO60841 1220 aaKnown RBP8.27□□□□□ -1.09
SPEN-202ENST00000438066 SMNDC1O75940 238 aaKnown RBP eCLIP8.27□□□□□ -1.09
SPEN-202ENST00000438066 ARNTP27540 789 aa8.27□□□□□ -1.09
SPEN-202ENST00000438066 RPL6Q02878 288 aaKnown RBP8.27□□□□□ -1.09
SPEN-202ENST00000438066 TCEA2Q15560 299 aa8.27□□□□□ -1.09
SPEN-202ENST00000438066 C21orf62-AS1Q17RA5 79 aa8.27□□□□□ -1.09
SPEN-202ENST00000438066 GGT6Q6P531 493 aa8.27□□□□□ -1.09
SPEN-202ENST00000438066 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.27□□□□□ -1.09
SPEN-202ENST00000438066 FAM178BQ8IXR5 827 aa8.27□□□□□ -1.09
SPEN-202ENST00000438066 RBSNQ9H1K0 784 aa8.27□□□□□ -1.09
SPEN-202ENST00000438066 NDFIP2Q9NV92 336 aa8.27□□□□□ -1.09
SPEN-202ENST00000438066 MYO3AQ8NEV4 1616 aa8.27□□□□□ -1.09
SPEN-202ENST00000438066 MYO5BQ9ULV0 1848 aa8.27□□□□□ -1.09
SPEN-202ENST00000438066 WASHC2CQ9Y4E1 1318 aa8.26□□□□□ -1.09
SPEN-202ENST00000438066 A0A1W2PQH9 124 aa8.26□□□□□ -1.09
SPEN-202ENST00000438066 MAN1A2O60476 641 aa8.26□□□□□ -1.09
SPEN-202ENST00000438066 PDGFRBP09619 1106 aa8.26□□□□□ -1.09
SPEN-202ENST00000438066 DBN1Q16643 649 aa8.26□□□□□ -1.09
SPEN-202ENST00000438066 CCDC181Q5TID7 509 aa8.26□□□□□ -1.09
SPEN-202ENST00000438066 MRM1Q6IN84 353 aaKnown RBP8.26□□□□□ -1.09
SPEN-202ENST00000438066 ADAMTSL4Q6UY14 1074 aa8.26□□□□□ -1.09
SPEN-202ENST00000438066 TTC6Q86TZ1 520 aa8.26□□□□□ -1.09
SPEN-202ENST00000438066 ZMYM5Q9UJ78 669 aa8.26□□□□□ -1.09
SPEN-202ENST00000438066 SETBP1Q9Y6X0 1596 aa8.26□□□□□ -1.09
SPEN-202ENST00000438066 DALRD3Q5D0E6 543 aaKnown RBP8.26□□□□□ -1.09
SPEN-202ENST00000438066 VN1R5Q7Z5H4 357 aa8.26□□□□□ -1.09
SPEN-202ENST00000438066 JMYQ8N9B5 988 aa8.26□□□□□ -1.09
SPEN-202ENST00000438066 NEXMIFQ5QGS0 1516 aa8.26□□□□□ -1.09
SPEN-202ENST00000438066 SCAF11Q99590 1463 aaKnown RBP8.25□□□□□ -1.09
SPEN-202ENST00000438066 CLTCQ00610 1675 aaKnown RBP8.25□□□□□ -1.09
SPEN-202ENST00000438066 H7C1W4 665 aa8.25□□□□□ -1.09
SPEN-202ENST00000438066 MAP1SQ66K74 1059 aaPredicted RBP8.25□□□□□ -1.09
SPEN-202ENST00000438066 CERS3Q8IU89 383 aa8.25□□□□□ -1.09
SPEN-202ENST00000438066 ST13P5Q8NFI4 369 aaPredicted RBP8.25□□□□□ -1.09
SPEN-202ENST00000438066 TESK2Q96S53 571 aa8.25□□□□□ -1.09
SPEN-202ENST00000438066 UBE2OQ9C0C9 1292 aaKnown RBP8.25□□□□□ -1.09
SPEN-202ENST00000438066 DNAJB12Q9NXW2 375 aaKnown RBP8.25□□□□□ -1.09
SPEN-202ENST00000438066 PIK3C2GO75747 1445 aa8.25□□□□□ -1.09
SPEN-202ENST00000438066 TMEM131LA2VDJ0 1609 aa8.25□□□□□ -1.09
SPEN-202ENST00000438066 MYOM1P52179 1685 aa8.24□□□□□ -1.09
SPEN-202ENST00000438066 SOBPA7XYQ1 873 aa8.24□□□□□ -1.09
SPEN-202ENST00000438066 ATE1O95260 518 aa8.24□□□□□ -1.09
SPEN-202ENST00000438066 CDK8P49336 464 aa8.24□□□□□ -1.09
SPEN-202ENST00000438066 C19orf47Q8N9M1 422 aaKnown RBP8.24□□□□□ -1.09
SPEN-202ENST00000438066 EMILIN2Q9BXX0 1053 aa8.24□□□□□ -1.09
SPEN-202ENST00000438066 PRKRIP1Q9H875 184 aaPredicted RBP8.24□□□□□ -1.09
SPEN-202ENST00000438066 SLC52A1Q9NWF4 448 aa8.24□□□□□ -1.09
SPEN-202ENST00000438066 SOX13Q9UN79 622 aa8.24□□□□□ -1.09
SPEN-202ENST00000438066 DISP3Q9P2K9 1392 aa8.24□□□□□ -1.09
SPEN-202ENST00000438066 ERVK-7P63135 1459 aa8.24□□□□□ -1.09
SPEN-202ENST00000438066 FAM187AA6NFU0 413 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 GUCY2CP25092 1073 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 PTSQ03393 145 aa8.23□□□□□ -1.09
SPEN-202ENST00000438066 ZNF252P-AS1Q0IIN9 211 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms