RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 WNT10AQ9GZT5 417 aa6.4□□□□□ -1.38
HMGB1P31-201ENST00000437242 C12orf49Q9H741 205 aa6.4□□□□□ -1.38
HMGB1P31-201ENST00000437242 FAM8A1Q9UBU6 413 aa6.4□□□□□ -1.38
HMGB1P31-201ENST00000437242 TTF2Q9UNY4 1162 aaKnown RBP6.4□□□□□ -1.38
HMGB1P31-201ENST00000437242 TSPAN15O95858 294 aa6.39□□□□□ -1.39
HMGB1P31-201ENST00000437242 CAP2P40123 477 aa6.39□□□□□ -1.39
HMGB1P31-201ENST00000437242 SLBPQ14493 270 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB1P31-201ENST00000437242 LCE4AQ5TA78 99 aa6.39□□□□□ -1.39
HMGB1P31-201ENST00000437242 LETMD1Q6P1Q0 360 aa6.39□□□□□ -1.39
HMGB1P31-201ENST00000437242 GAL3ST3Q96A11 431 aa6.39□□□□□ -1.39
HMGB1P31-201ENST00000437242 CCDC120Q96HB5 630 aa6.39□□□□□ -1.39
HMGB1P31-201ENST00000437242 WWC3Q9ULE0 1092 aa6.39□□□□□ -1.39
HMGB1P31-201ENST00000437242 GDNFP39905 211 aa6.38□□□□□ -1.39
HMGB1P31-201ENST00000437242 PTPN11Q06124 597 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P31-201ENST00000437242 NKG7Q16617 165 aa6.38□□□□□ -1.39
HMGB1P31-201ENST00000437242 PRR23BQ6ZRT6 265 aa6.38□□□□□ -1.39
HMGB1P31-201ENST00000437242 SYDE1Q6ZW31 735 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P31-201ENST00000437242 SV2BQ7L1I2 683 aa6.38□□□□□ -1.39
HMGB1P31-201ENST00000437242 HID1Q8IV36 788 aa6.38□□□□□ -1.39
HMGB1P31-201ENST00000437242 ASB16Q96NS5 453 aa6.38□□□□□ -1.39
HMGB1P31-201ENST00000437242 SNCAIPQ9Y6H5 919 aa6.38□□□□□ -1.39
HMGB1P31-201ENST00000437242 CAPN6Q9Y6Q1 641 aa6.38□□□□□ -1.39
HMGB1P31-201ENST00000437242 SUPT5HO00267 1087 aaKnown RBP6.37□□□□□ -1.39
HMGB1P31-201ENST00000437242 CBX7O95931 251 aa6.37□□□□□ -1.39
HMGB1P31-201ENST00000437242 LMNB1P20700 586 aa6.37□□□□□ -1.39
HMGB1P31-201ENST00000437242 CYP7A1P22680 504 aa6.37□□□□□ -1.39
HMGB1P31-201ENST00000437242 TTBK2Q6IQ55 1244 aa6.37□□□□□ -1.39
HMGB1P31-201ENST00000437242 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P31-201ENST00000437242 THAP5Q7Z6K1 395 aa6.37□□□□□ -1.39
HMGB1P31-201ENST00000437242 ZSCAN18Q8TBC5 510 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P31-201ENST00000437242 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
HMGB1P31-201ENST00000437242 C19orf73Q9NVV2 129 aa6.37□□□□□ -1.39
HMGB1P31-201ENST00000437242 ST14Q9Y5Y6 855 aa6.37□□□□□ -1.39
HMGB1P31-201ENST00000437242 CNTNAP4Q9C0A0 1308 aa6.36□□□□□ -1.39
HMGB1P31-201ENST00000437242 RAC2P15153 192 aa6.36□□□□□ -1.39
HMGB1P31-201ENST00000437242 PRAMEF13Q5VWM6 474 aa6.36□□□□□ -1.39
HMGB1P31-201ENST00000437242 ANKLE2Q86XL3 938 aa6.36□□□□□ -1.39
HMGB1P31-201ENST00000437242 XAGE3Q8WTP9 111 aa6.36□□□□□ -1.39
HMGB1P31-201ENST00000437242 COX4I2Q96KJ9 171 aa6.36□□□□□ -1.39
HMGB1P31-201ENST00000437242 ALPK1Q96QP1 1244 aa6.36□□□□□ -1.39
HMGB1P31-201ENST00000437242 SLAMF8Q9P0V8 285 aa6.36□□□□□ -1.39
HMGB1P31-201ENST00000437242 CST3P01034 146 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P31-201ENST00000437242 GRK4P32298 578 aa6.35□□□□□ -1.39
HMGB1P31-201ENST00000437242 KIR3DL1P43629 444 aa6.35□□□□□ -1.39
HMGB1P31-201ENST00000437242 CDK8P49336 464 aa6.35□□□□□ -1.39
HMGB1P31-201ENST00000437242 CILP2Q8IUL8 1156 aa6.35□□□□□ -1.39
HMGB1P31-201ENST00000437242 LRRC56Q8IYG6 542 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P31-201ENST00000437242 FBXO15Q8NCQ5 510 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P31-201ENST00000437242 UBE2FQ969M7 185 aa6.35□□□□□ -1.39
HMGB1P31-201ENST00000437242 DIRC2Q96SL1 478 aa6.35□□□□□ -1.39
HMGB1P31-201ENST00000437242 NSUN3Q9H649 340 aaKnown RBP6.35□□□□□ -1.39
HMGB1P31-201ENST00000437242 ZSWIM5Q9P217 1185 aa6.35□□□□□ -1.39
HMGB1P31-201ENST00000437242 NFIBO00712 420 aa6.34□□□□□ -1.39
HMGB1P31-201ENST00000437242 LDHBP07195 334 aaKnown RBP6.34□□□□□ -1.39
HMGB1P31-201ENST00000437242 P4HBP07237 508 aaKnown RBP6.34□□□□□ -1.39
HMGB1P31-201ENST00000437242 CFPP27918 469 aa6.34□□□□□ -1.39
HMGB1P31-201ENST00000437242 RIN3Q8TB24 985 aa6.34□□□□□ -1.39
HMGB1P31-201ENST00000437242 FRMD6Q96NE9 622 aa6.34□□□□□ -1.39
HMGB1P31-201ENST00000437242 EIF4BP23588 611 aaKnown RBP6.33□□□□□ -1.4
HMGB1P31-201ENST00000437242 SEPT6Q14141 434 aa6.33□□□□□ -1.4
HMGB1P31-201ENST00000437242 CCDC85BQ15834 202 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P31-201ENST00000437242 TTC6Q86TZ1 520 aa6.33□□□□□ -1.4
HMGB1P31-201ENST00000437242 IVNS1ABPQ9Y6Y0 642 aa6.33□□□□□ -1.4
HMGB1P31-201ENST00000437242 C1QTNF9P0C862 333 aa6.32□□□□□ -1.4
HMGB1P31-201ENST00000437242 RPS26P62854 115 aaKnown RBP6.32□□□□□ -1.4
HMGB1P31-201ENST00000437242 TNK2Q07912 1038 aa6.32□□□□□ -1.4
HMGB1P31-201ENST00000437242 TMPRSS7Q7RTY8 843 aa6.32□□□□□ -1.4
HMGB1P31-201ENST00000437242 CDH24Q86UP0 819 aa6.32□□□□□ -1.4
HMGB1P31-201ENST00000437242 C1QL4Q86Z23 238 aa6.32□□□□□ -1.4
HMGB1P31-201ENST00000437242 ABHD4Q8TB40 342 aa6.32□□□□□ -1.4
HMGB1P31-201ENST00000437242 PIWIL2Q8TC59 973 aaKnown RBP6.32□□□□□ -1.4
HMGB1P31-201ENST00000437242 DPH2Q9BQC3 489 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P31-201ENST00000437242 EPB41L4BQ9H329 900 aa6.32□□□□□ -1.4
HMGB1P31-201ENST00000437242 TACC3Q9Y6A5 838 aa6.32□□□□□ -1.4
HMGB1P31-201ENST00000437242 PGRP06401 933 aa6.31□□□□□ -1.4
HMGB1P31-201ENST00000437242 GNA15P30679 374 aa6.31□□□□□ -1.4
HMGB1P31-201ENST00000437242 ETV3P41162 512 aa6.31□□□□□ -1.4
HMGB1P31-201ENST00000437242 ERICH6Q7L0X2 663 aa6.31□□□□□ -1.4
HMGB1P31-201ENST00000437242 DCP1AQ9NPI6 582 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P31-201ENST00000437242 TMEM59LQ9UK28 342 aa6.31□□□□□ -1.4
HMGB1P31-201ENST00000437242 PCDHB5Q9Y5E4 795 aa6.31□□□□□ -1.4
HMGB1P31-201ENST00000437242 DNAJC25-GNG10A0A024R161 153 aa6.3□□□□□ -1.4
HMGB1P31-201ENST00000437242 TMEM253P0C7T8 217 aa6.3□□□□□ -1.4
HMGB1P31-201ENST00000437242 ZSCAN22P10073 491 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P31-201ENST00000437242 HK2P52789 917 aa6.3□□□□□ -1.4
HMGB1P31-201ENST00000437242 LCNL1Q6ZST4 164 aa6.3□□□□□ -1.4
HMGB1P31-201ENST00000437242 MRPL41Q8IXM3 137 aaKnown RBP6.3□□□□□ -1.4
HMGB1P31-201ENST00000437242 TMEM87BQ96K49 555 aa6.3□□□□□ -1.4
HMGB1P31-201ENST00000437242 TJP2Q9UDY2 1190 aa6.3□□□□□ -1.4
HMGB1P31-201ENST00000437242 GFRA2O00451 464 aa6.29□□□□□ -1.4
HMGB1P31-201ENST00000437242 ESR1P03372 595 aa6.29□□□□□ -1.4
HMGB1P31-201ENST00000437242 LIG3P49916 1009 aa6.29□□□□□ -1.4
HMGB1P31-201ENST00000437242 PDE4BQ07343 736 aa6.29□□□□□ -1.4
HMGB1P31-201ENST00000437242 KCNA1Q09470 495 aa6.29□□□□□ -1.4
HMGB1P31-201ENST00000437242 MAP3K11Q16584 847 aa6.29□□□□□ -1.4
HMGB1P31-201ENST00000437242 RALGPS1Q5JS13 557 aa6.29□□□□□ -1.4
HMGB1P31-201ENST00000437242 SLC6A19Q695T7 634 aa6.29□□□□□ -1.4
HMGB1P31-201ENST00000437242 AGMOQ6ZNB7 445 aa6.29□□□□□ -1.4
HMGB1P31-201ENST00000437242 CREG2Q8IUH2 290 aa6.29□□□□□ -1.4
HMGB1P31-201ENST00000437242 SIAH1Q8IUQ4 282 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms