RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 USP4Q13107 963 aa6.07□□□□□ -1.44
CAST-209ENST00000437034 SMC1AQ14683 1233 aaKnown RBP6.07□□□□□ -1.44
CAST-209ENST00000437034 RSRC2Q7L4I2 434 aaKnown RBP6.07□□□□□ -1.44
CAST-209ENST00000437034 SPATS2Q86XZ4 545 aaKnown RBP6.07□□□□□ -1.44
CAST-209ENST00000437034 LRRC49Q8IUZ0 686 aa6.07□□□□□ -1.44
CAST-209ENST00000437034 SLAIN1Q8ND83 568 aa6.07□□□□□ -1.44
CAST-209ENST00000437034 ARMC2Q8NEN0 867 aa6.07□□□□□ -1.44
CAST-209ENST00000437034 PPP1R14CQ8TAE6 165 aa6.07□□□□□ -1.44
CAST-209ENST00000437034 KIAA1524Q8TCG1 905 aa6.07□□□□□ -1.44
CAST-209ENST00000437034 RSAD2Q8WXG1 361 aa6.07□□□□□ -1.44
CAST-209ENST00000437034 TBC1D5Q92609 795 aa6.07□□□□□ -1.44
CAST-209ENST00000437034 FAXDC2Q96IV6 333 aa6.07□□□□□ -1.44
CAST-209ENST00000437034 ALPK1Q96QP1 1244 aa6.07□□□□□ -1.44
CAST-209ENST00000437034 NGRNQ9NPE2 291 aaKnown RBP6.07□□□□□ -1.44
CAST-209ENST00000437034 PSD3Q9NYI0 1048 aa6.07□□□□□ -1.44
CAST-209ENST00000437034 SPO11Q9Y5K1 396 aa6.07□□□□□ -1.44
CAST-209ENST00000437034 SCG2P13521 617 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 MRE11P49959 708 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 SKOR1P84550 965 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 LDLRAD1Q5T700 205 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 TMEM164Q5U3C3 297 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 SASS6Q6UVJ0 657 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 LEKR1Q6ZMV7 388 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 NANOGNBQ7Z5D8 188 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 ZNF354CQ86Y25 554 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 ERC1Q8IUD2 1116 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 MIPOL1Q8TD10 442 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 WHAMMQ8TF30 809 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 RABGGTAQ92696 567 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 SMAD5Q99717 465 aaKnown RBP6.06□□□□□ -1.44
CAST-209ENST00000437034 FAM167BQ9BTA0 163 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 HPS4Q9NQG7 708 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 DDX21Q9NR30 783 aaKnown RBP eCLIP6.06□□□□□ -1.44
CAST-209ENST00000437034 HDAC6Q9UBN7 1215 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.06□□□□□ -1.44
CAST-209ENST00000437034 KIF13AQ9H1H9 1805 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 CLIP1P30622 1438 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 LRRC72A6NJI9 287 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 TOR1BO14657 336 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 STAM2O75886 525 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 ARIH2O95376 493 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 SLFN14P0C7P3 912 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 KRT13P13646 458 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 CHMP4BP1P59074 171 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 CNGA3Q16281 694 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 INAQ16352 499 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 HYIQ5T013 277 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 HIBCHQ6NVY1 386 aaPredicted RBP6.06□□□□□ -1.44
CAST-209ENST00000437034 CCDC129Q6ZRS4 1044 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 DGKHQ86XP1 1220 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 ANKK1Q8NFD2 765 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 FAM163AQ96GL9 167 aaPredicted RBP6.06□□□□□ -1.44
CAST-209ENST00000437034 VCX3BQ9H321 246 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 QPCTLQ9NXS2 382 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 FMN1Q68DA7 1419 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 ATP6V1G1O75348 118 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 FRAT2O75474 233 aaPredicted RBP6.06□□□□□ -1.44
CAST-209ENST00000437034 BTF3P20290 206 aaKnown RBP6.06□□□□□ -1.44
CAST-209ENST00000437034 CTHP32929 405 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 SCNN1DP51172 638 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 VWA3BQ502W6 1294 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 CCDC122Q5T0U0 273 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 NAA16Q6N069 864 aaPredicted RBP6.06□□□□□ -1.44
CAST-209ENST00000437034 GBP6Q6ZN66 633 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 SPICE1Q8N0Z3 855 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 HDAC7Q8WUI4 952 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 APPBP2Q92624 585 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 ZIM2Q9NZV7 527 aa6.06□□□□□ -1.44
CAST-209ENST00000437034 KDM1AO60341 852 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 SEPHS1P49903 392 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 RBL2Q08999 1139 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 TBC1D8BQ0IIM8 1120 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 ANKRD1Q15327 319 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 SH3D19Q5HYK7 790 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 SH2D4BQ5SQS7 431 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 FBXO31Q5XUX0 539 aaPredicted RBP6.05□□□□□ -1.44
CAST-209ENST00000437034 CCDC186Q7Z3E2 898 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 SPATA21Q7Z572 469 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 CCDC144CPQ8IYA2 1237 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 THEMISQ8N1K5 641 aaPredicted RBP6.05□□□□□ -1.44
CAST-209ENST00000437034 MIEF2Q96C03 454 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 ZMAT2Q96NC0 199 aaKnown RBP6.05□□□□□ -1.44
CAST-209ENST00000437034 SYNCQ9H7C4 482 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 RNF19AQ9NV58 838 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 FBXO10Q9UK96 956 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 PA2G4Q9UQ80 394 aaKnown RBP6.05□□□□□ -1.44
CAST-209ENST00000437034 NUP153P49790 1475 aaKnown RBP6.05□□□□□ -1.44
CAST-209ENST00000437034 SHANK2Q9UPX8 1470 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 SART1O43290 800 aaKnown RBP6.05□□□□□ -1.44
CAST-209ENST00000437034 MAP3K7O43318 606 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 PRPF3O43395 683 aaKnown RBP6.05□□□□□ -1.44
CAST-209ENST00000437034 XRCC5P13010 732 aaKnown RBP6.05□□□□□ -1.44
CAST-209ENST00000437034 RAC2P15153 192 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 CNGA1P29973 690 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 POLD2P49005 469 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 HNRNPH2P55795 449 aaKnown RBP6.05□□□□□ -1.44
CAST-209ENST00000437034 NFE2Q16621 373 aaPredicted RBP6.05□□□□□ -1.44
CAST-209ENST00000437034 SWSAP1Q6NVH7 229 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 PDCL2Q8N4E4 241 aa6.05□□□□□ -1.44
CAST-209ENST00000437034 LINC00469Q8N7U9 141 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms