RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 SYN1P17600 705 aa22.53■■□□□ 1.2
UBXN1-203ENST00000436354 RARSP54136 660 aaKnown RBP22.53■■□□□ 1.2
UBXN1-203ENST00000436354 HERVK_113P62684 666 aa22.53■■□□□ 1.2
UBXN1-203ENST00000436354 NAA16Q6N069 864 aaPredicted RBP22.53■■□□□ 1.2
UBXN1-203ENST00000436354 FOXP4Q8IVH2 680 aaPredicted RBP22.53■■□□□ 1.2
UBXN1-203ENST00000436354 TRIM34Q9BYJ4 488 aa22.53■■□□□ 1.2
UBXN1-203ENST00000436354 AATFQ9NY61 560 aaKnown RBP eCLIP22.53■■□□□ 1.2
UBXN1-203ENST00000436354 USP17L10C9JJH3 530 aa22.52■■□□□ 1.2
UBXN1-203ENST00000436354 MAPK4P31152 587 aa22.52■■□□□ 1.2
UBXN1-203ENST00000436354 MAGEA10P43363 369 aaPredicted RBP22.52■■□□□ 1.2
UBXN1-203ENST00000436354 PDE3AQ14432 1141 aa22.52■■□□□ 1.2
UBXN1-203ENST00000436354 LRIT3Q3SXY7 679 aa22.52■■□□□ 1.2
UBXN1-203ENST00000436354 CRACR2BQ8N4Y2 399 aaPredicted RBP22.52■■□□□ 1.2
UBXN1-203ENST00000436354 MAST2Q6P0Q8 1798 aa22.52■■□□□ 1.2
UBXN1-203ENST00000436354 GNAI2P04899 355 aa22.51■■□□□ 1.19
UBXN1-203ENST00000436354 PPP4CP60510 307 aa22.51■■□□□ 1.19
UBXN1-203ENST00000436354 METTL16Q86W50 562 aaKnown RBP22.51■■□□□ 1.19
UBXN1-203ENST00000436354 CCAR1Q8IX12 1150 aaKnown RBP22.51■■□□□ 1.19
UBXN1-203ENST00000436354 TDHQ8IZJ6 230 aa22.51■■□□□ 1.19
UBXN1-203ENST00000436354 TXNRD2Q9NNW7 524 aa22.51■■□□□ 1.19
UBXN1-203ENST00000436354 CDK5RAP2Q96SN8 1893 aa22.5■■□□□ 1.19
UBXN1-203ENST00000436354 ZKSCAN1P17029 563 aaPredicted RBP22.5■■□□□ 1.19
UBXN1-203ENST00000436354 JAG1P78504 1218 aa22.5■■□□□ 1.19
UBXN1-203ENST00000436354 MAPKAPK5Q8IW41 473 aa22.5■■□□□ 1.19
UBXN1-203ENST00000436354 DEFB123Q8N688 67 aa22.5■■□□□ 1.19
UBXN1-203ENST00000436354 GTF3C2Q8WUA4 911 aaPredicted RBP22.5■■□□□ 1.19
UBXN1-203ENST00000436354 TGFBRAP1Q8WUH2 860 aa22.5■■□□□ 1.19
UBXN1-203ENST00000436354 DNAJC18Q9H819 358 aa22.5■■□□□ 1.19
UBXN1-203ENST00000436354 RBPJLQ9UBG7 517 aa22.5■■□□□ 1.19
UBXN1-203ENST00000436354 FLT1P17948 1338 aa22.5■■□□□ 1.19
UBXN1-203ENST00000436354 FOCADQ5VW36 1801 aa22.5■■□□□ 1.19
UBXN1-203ENST00000436354 PNMA6EA0A0J9YXQ4 647 aa22.49■■□□□ 1.19
UBXN1-203ENST00000436354 IPO8O15397 1037 aaKnown RBP22.49■■□□□ 1.19
UBXN1-203ENST00000436354 PEX10O60683 326 aa22.49■■□□□ 1.19
UBXN1-203ENST00000436354 RGS2P41220 211 aa22.49■■□□□ 1.19
UBXN1-203ENST00000436354 TTC39AQ5SRH9 613 aa22.49■■□□□ 1.19
UBXN1-203ENST00000436354 UBE2OQ9C0C9 1292 aaKnown RBP22.49■■□□□ 1.19
UBXN1-203ENST00000436354 SNRKQ9NRH2 765 aa22.49■■□□□ 1.19
UBXN1-203ENST00000436354 PALD1Q9ULE6 856 aa22.49■■□□□ 1.19
UBXN1-203ENST00000436354 ZBTB21Q9ULJ3 1066 aa22.49■■□□□ 1.19
UBXN1-203ENST00000436354 LAMA3Q16787 3333 aa22.49■■□□□ 1.19
UBXN1-203ENST00000436354 PFASO15067 1338 aa22.49■■□□□ 1.19
UBXN1-203ENST00000436354 COL6A3P12111 3177 aa22.48■■□□□ 1.19
UBXN1-203ENST00000436354 IGSF3O75054 1194 aa22.48■■□□□ 1.19
UBXN1-203ENST00000436354 GDF11O95390 407 aa22.48■■□□□ 1.19
UBXN1-203ENST00000436354 ERVK-9P63128 1117 aa22.48■■□□□ 1.19
UBXN1-203ENST00000436354 ERVK-24P63145 666 aa22.48■■□□□ 1.19
UBXN1-203ENST00000436354 CACNB2Q08289 660 aaPredicted RBP22.48■■□□□ 1.19
UBXN1-203ENST00000436354 CCDC158Q5M9N0 1113 aa22.48■■□□□ 1.19
UBXN1-203ENST00000436354 ATF7IPQ6VMQ6 1270 aa22.48■■□□□ 1.19
UBXN1-203ENST00000436354 USP6NLQ92738 828 aa22.48■■□□□ 1.19
UBXN1-203ENST00000436354 GPR108Q9NPR9 543 aa22.48■■□□□ 1.19
UBXN1-203ENST00000436354 COL6A1P12109 1028 aa22.47■■□□□ 1.19
UBXN1-203ENST00000436354 Q3C1V9 767 aa22.47■■□□□ 1.19
UBXN1-203ENST00000436354 GPR142Q7Z601 462 aa22.47■■□□□ 1.19
UBXN1-203ENST00000436354 HLA-DOAP06340 250 aa22.46■■□□□ 1.19
UBXN1-203ENST00000436354 SHROOM1Q2M3G4 852 aaPredicted RBP22.46■■□□□ 1.19
UBXN1-203ENST00000436354 MORN1Q5T089 497 aa22.46■■□□□ 1.19
UBXN1-203ENST00000436354 USP17L2Q6R6M4 530 aa22.46■■□□□ 1.19
UBXN1-203ENST00000436354 PLEKHH3Q7Z736 793 aa22.46■■□□□ 1.19
UBXN1-203ENST00000436354 ADGRA1Q86SQ6 560 aa22.46■■□□□ 1.19
UBXN1-203ENST00000436354 APBA2Q99767 749 aa22.46■■□□□ 1.19
UBXN1-203ENST00000436354 PAGR1Q9BTK6 254 aa22.46■■□□□ 1.19
UBXN1-203ENST00000436354 PORCNQ9H237 461 aa22.46■■□□□ 1.19
UBXN1-203ENST00000436354 CWC22Q9HCG8 908 aaKnown RBP22.46■■□□□ 1.19
UBXN1-203ENST00000436354 EMILIN3Q9NT22 766 aa22.46■■□□□ 1.19
UBXN1-203ENST00000436354 STXBP5LQ9Y2K9 1186 aa22.46■■□□□ 1.19
UBXN1-203ENST00000436354 CYP2E1P05181 493 aaPredicted RBP22.45■■□□□ 1.18
UBXN1-203ENST00000436354 TRIM27P14373 513 aa22.45■■□□□ 1.18
UBXN1-203ENST00000436354 CCND3P30281 292 aaPredicted RBP22.45■■□□□ 1.18
UBXN1-203ENST00000436354 TNNI3KQ59H18 835 aa22.45■■□□□ 1.18
UBXN1-203ENST00000436354 LHX8Q68G74 356 aa22.45■■□□□ 1.18
UBXN1-203ENST00000436354 Q7L0L9 218 aa22.45■■□□□ 1.18
UBXN1-203ENST00000436354 FPGT-TNNI3KV9GXZ4 949 aa22.45■■□□□ 1.18
UBXN1-203ENST00000436354 CCL14Q16627 93 aa22.44■■□□□ 1.18
UBXN1-203ENST00000436354 DBNDD2Q9BQY9 259 aa22.44■■□□□ 1.18
UBXN1-203ENST00000436354 MTMR10Q9NXD2 777 aa22.44■■□□□ 1.18
UBXN1-203ENST00000436354 SAP30BPQ9UHR5 308 aaKnown RBP22.44■■□□□ 1.18
UBXN1-203ENST00000436354 MYO5AQ9Y4I1 1855 aaKnown RBP22.43■■□□□ 1.18
UBXN1-203ENST00000436354 GLRX3O76003 335 aaKnown RBP22.43■■□□□ 1.18
UBXN1-203ENST00000436354 CCNA1P78396 465 aa22.43■■□□□ 1.18
UBXN1-203ENST00000436354 OS9Q13438 667 aaPredicted RBP22.43■■□□□ 1.18
UBXN1-203ENST00000436354 ZNF512BQ96KM6 892 aaPredicted RBP22.43■■□□□ 1.18
UBXN1-203ENST00000436354 RABGAP1Q9Y3P9 1069 aa22.43■■□□□ 1.18
UBXN1-203ENST00000436354 MAP2K5Q13163 448 aa22.42■■□□□ 1.18
UBXN1-203ENST00000436354 LRRC26Q2I0M4 334 aa22.42■■□□□ 1.18
UBXN1-203ENST00000436354 POTEEQ6S8J3 1075 aa22.42■■□□□ 1.18
UBXN1-203ENST00000436354 FRAT1Q92837 279 aaPredicted RBP22.42■■□□□ 1.18
UBXN1-203ENST00000436354 C12orf42Q96LP6 360 aa22.42■■□□□ 1.18
UBXN1-203ENST00000436354 FEZ1Q99689 392 aa22.42■■□□□ 1.18
UBXN1-203ENST00000436354 USP17L15C9J2P7 530 aa22.41■■□□□ 1.18
UBXN1-203ENST00000436354 USP17L13C9JLJ4 530 aa22.41■■□□□ 1.18
UBXN1-203ENST00000436354 USP17L11C9JVI0 530 aa22.41■■□□□ 1.18
UBXN1-203ENST00000436354 USP17L18D6R9N7 530 aa22.41■■□□□ 1.18
UBXN1-203ENST00000436354 USP17L22D6RA61 530 aa22.41■■□□□ 1.18
UBXN1-203ENST00000436354 USP17L17D6RBQ6 530 aa22.41■■□□□ 1.18
UBXN1-203ENST00000436354 USP17L19D6RCP7 530 aa22.41■■□□□ 1.18
UBXN1-203ENST00000436354 USP17L20D6RJB6 530 aa22.41■■□□□ 1.18
UBXN1-203ENST00000436354 GH2P01242 217 aa22.41■■□□□ 1.18
UBXN1-203ENST00000436354 ZAP70P43403 619 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms