RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 MTMR2Q13614 643 aa18.59■□□□□ 0.57
NELFE-204ENST00000436289 DDX20Q9UHI6 824 aaKnown RBP18.59■□□□□ 0.57
NELFE-204ENST00000436289 USP17L10C9JJH3 530 aa18.58■□□□□ 0.56
NELFE-204ENST00000436289 FOSL2P15408 326 aa18.58■□□□□ 0.56
NELFE-204ENST00000436289 COL9A1P20849 921 aa18.58■□□□□ 0.56
NELFE-204ENST00000436289 MECOMQ03112 1051 aa18.58■□□□□ 0.56
NELFE-204ENST00000436289 RASGRF1Q13972 1273 aa18.58■□□□□ 0.56
NELFE-204ENST00000436289 SHHQ15465 462 aa18.58■□□□□ 0.56
NELFE-204ENST00000436289 Q3C1V9 767 aa18.58■□□□□ 0.56
NELFE-204ENST00000436289 TJAP1Q5JTD0 557 aa18.58■□□□□ 0.56
NELFE-204ENST00000436289 ARRDC4Q8NCT1 418 aa18.58■□□□□ 0.56
NELFE-204ENST00000436289 FAM196BA6NMK8 535 aa18.57■□□□□ 0.56
NELFE-204ENST00000436289 TNFRSF10AO00220 468 aa18.57■□□□□ 0.56
NELFE-204ENST00000436289 CCL14Q16627 93 aa18.57■□□□□ 0.56
NELFE-204ENST00000436289 FOXP4Q8IVH2 680 aaPredicted RBP18.57■□□□□ 0.56
NELFE-204ENST00000436289 RABGAP1Q9Y3P9 1069 aa18.57■□□□□ 0.56
NELFE-204ENST00000436289 SALL2Q9Y467 1007 aaPredicted RBP18.57■□□□□ 0.56
NELFE-204ENST00000436289 DNAH12Q6ZR08 3092 aa18.57■□□□□ 0.56
NELFE-204ENST00000436289 PRUNE2Q8WUY3 3088 aa18.56■□□□□ 0.56
NELFE-204ENST00000436289 SLC15A5A6NIM6 579 aa18.56■□□□□ 0.56
NELFE-204ENST00000436289 HOXC6P09630 235 aa18.56■□□□□ 0.56
NELFE-204ENST00000436289 ATN1P54259 1190 aaPredicted RBP18.56■□□□□ 0.56
NELFE-204ENST00000436289 RTP1P59025 263 aa18.56■□□□□ 0.56
NELFE-204ENST00000436289 MYLIPQ8WY64 445 aa18.56■□□□□ 0.56
NELFE-204ENST00000436289 SIL1Q9H173 461 aa18.56■□□□□ 0.56
NELFE-204ENST00000436289 PORCNQ9H237 461 aa18.56■□□□□ 0.56
NELFE-204ENST00000436289 AKAP2Q9Y2D5 859 aa18.56■□□□□ 0.56
NELFE-204ENST00000436289 ATP2B2Q01814 1243 aa18.55■□□□□ 0.56
NELFE-204ENST00000436289 MVPQ14764 893 aaKnown RBP18.55■□□□□ 0.56
NELFE-204ENST00000436289 MRPL50Q8N5N7 158 aaKnown RBP18.55■□□□□ 0.56
NELFE-204ENST00000436289 EYSQ5T1H1 3165 aa18.54■□□□□ 0.56
NELFE-204ENST00000436289 CNGA1P29973 690 aa18.54■□□□□ 0.56
NELFE-204ENST00000436289 RRP1BQ14684 758 aaKnown RBP18.54■□□□□ 0.56
NELFE-204ENST00000436289 USP17L2Q6R6M4 530 aa18.54■□□□□ 0.56
NELFE-204ENST00000436289 SLC39A5Q6ZMH5 540 aa18.54■□□□□ 0.56
NELFE-204ENST00000436289 NOL10Q9BSC4 688 aaKnown RBP18.54■□□□□ 0.56
NELFE-204ENST00000436289 TTYH1Q9H313 450 aaPredicted RBP18.54■□□□□ 0.56
NELFE-204ENST00000436289 IVNS1ABPQ9Y6Y0 642 aa18.54■□□□□ 0.56
NELFE-204ENST00000436289 PLCG2P16885 1265 aa18.53■□□□□ 0.56
NELFE-204ENST00000436289 CCDC184Q52MB2 194 aa18.53■□□□□ 0.56
NELFE-204ENST00000436289 C1orf53Q5VUE5 145 aa18.53■□□□□ 0.56
NELFE-204ENST00000436289 METTL16Q86W50 562 aaKnown RBP18.53■□□□□ 0.56
NELFE-204ENST00000436289 TEX11Q8IYF3 940 aa18.53■□□□□ 0.56
NELFE-204ENST00000436289 NSUN4Q96CB9 384 aaKnown RBP18.53■□□□□ 0.56
NELFE-204ENST00000436289 PAGR1Q9BTK6 254 aa18.53■□□□□ 0.56
NELFE-204ENST00000436289 TRIM34Q9BYJ4 488 aa18.53■□□□□ 0.56
NELFE-204ENST00000436289 COPRSQ9NQ92 184 aa18.53■□□□□ 0.56
NELFE-204ENST00000436289 ATP11BQ9Y2G3 1177 aa18.53■□□□□ 0.56
NELFE-204ENST00000436289 KBTBD13C9JR72 458 aa18.52■□□□□ 0.56
NELFE-204ENST00000436289 BAG3O95817 575 aa18.52■□□□□ 0.56
NELFE-204ENST00000436289 UBTFL1P0CB47 393 aaPredicted RBP18.52■□□□□ 0.56
NELFE-204ENST00000436289 PTPREP23469 700 aa18.52■□□□□ 0.56
NELFE-204ENST00000436289 ADORA1P30542 326 aa18.52■□□□□ 0.56
NELFE-204ENST00000436289 TIMM10P62072 90 aa18.52■□□□□ 0.56
NELFE-204ENST00000436289 C9orf50Q5SZB4 431 aa18.52■□□□□ 0.56
NELFE-204ENST00000436289 USP17L15C9J2P7 530 aa18.51■□□□□ 0.55
NELFE-204ENST00000436289 USP17L13C9JLJ4 530 aa18.51■□□□□ 0.55
NELFE-204ENST00000436289 USP17L11C9JVI0 530 aa18.51■□□□□ 0.55
NELFE-204ENST00000436289 USP17L18D6R9N7 530 aa18.51■□□□□ 0.55
NELFE-204ENST00000436289 USP17L22D6RA61 530 aa18.51■□□□□ 0.55
NELFE-204ENST00000436289 USP17L17D6RBQ6 530 aa18.51■□□□□ 0.55
NELFE-204ENST00000436289 USP17L19D6RCP7 530 aa18.51■□□□□ 0.55
NELFE-204ENST00000436289 USP17L20D6RJB6 530 aa18.51■□□□□ 0.55
NELFE-204ENST00000436289 IGSF3O75054 1194 aa18.51■□□□□ 0.55
NELFE-204ENST00000436289 USP17L24Q0WX57 530 aa18.51■□□□□ 0.55
NELFE-204ENST00000436289 SNX17Q15036 470 aa18.51■□□□□ 0.55
NELFE-204ENST00000436289 ATF7IPQ6VMQ6 1270 aa18.51■□□□□ 0.55
NELFE-204ENST00000436289 CRACR2BQ8N4Y2 399 aaPredicted RBP18.51■□□□□ 0.55
NELFE-204ENST00000436289 BADQ92934 168 aa18.51■□□□□ 0.55
NELFE-204ENST00000436289 PEX10O60683 326 aa18.5■□□□□ 0.55
NELFE-204ENST00000436289 ZNF384Q8TF68 577 aa18.5■□□□□ 0.55
NELFE-204ENST00000436289 XAGE2Q96GT9 111 aa18.5■□□□□ 0.55
NELFE-204ENST00000436289 PRDM5Q9NQX1 630 aaPredicted RBP18.5■□□□□ 0.55
NELFE-204ENST00000436289 EMILIN3Q9NT22 766 aa18.5■□□□□ 0.55
NELFE-204ENST00000436289 RAI14Q9P0K7 980 aa18.5■□□□□ 0.55
NELFE-204ENST00000436289 TACC3Q9Y6A5 838 aa18.5■□□□□ 0.55
NELFE-204ENST00000436289 MAST2Q6P0Q8 1798 aa18.5■□□□□ 0.55
NELFE-204ENST00000436289 MUC3AQ02505 3323 aa18.49■□□□□ 0.55
NELFE-204ENST00000436289 A0A1B0GUL7 405 aa18.49■□□□□ 0.55
NELFE-204ENST00000436289 STRNO43815 780 aa18.49■□□□□ 0.55
NELFE-204ENST00000436289 USP14P54578 494 aa18.49■□□□□ 0.55
NELFE-204ENST00000436289 GRB14Q14449 540 aa18.49■□□□□ 0.55
NELFE-204ENST00000436289 LBX2Q6XYB7 198 aa18.49■□□□□ 0.55
NELFE-204ENST00000436289 SPATA5Q8NB90 893 aa18.49■□□□□ 0.55
NELFE-204ENST00000436289 ATXN2LQ8WWM7 1075 aaKnown RBP18.49■□□□□ 0.55
NELFE-204ENST00000436289 C12orf42Q96LP6 360 aa18.49■□□□□ 0.55
NELFE-204ENST00000436289 FLRT1Q9NZU1 646 aa18.49■□□□□ 0.55
NELFE-204ENST00000436289 NCOR1O75376 2440 aa18.49■□□□□ 0.55
NELFE-204ENST00000436289 ATAD5Q96QE3 1844 aa18.49■□□□□ 0.55
NELFE-204ENST00000436289 GJC2Q5T442 439 aaPredicted RBP18.48■□□□□ 0.55
NELFE-204ENST00000436289 WDR78Q5VTH9 848 aa18.48■□□□□ 0.55
NELFE-204ENST00000436289 OLFML2BQ68BL8 750 aa18.48■□□□□ 0.55
NELFE-204ENST00000436289 MRS2Q9HD23 443 aa18.48■□□□□ 0.55
NELFE-204ENST00000436289 SLC5A4Q9NY91 659 aa18.48■□□□□ 0.55
NELFE-204ENST00000436289 HMG20BQ9P0W2 317 aa18.48■□□□□ 0.55
NELFE-204ENST00000436289 LRP2BPQ9P2M1 347 aa18.48■□□□□ 0.55
NELFE-204ENST00000436289 ZBTB21Q9ULJ3 1066 aa18.48■□□□□ 0.55
NELFE-204ENST00000436289 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.47■□□□□ 0.55
NELFE-204ENST00000436289 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.47■□□□□ 0.55
NELFE-204ENST00000436289 IGHA2P01877 340 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms