RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 RASGRF1Q13972 1273 aa6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 CDCP2Q5VXM1 449 aa6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 TTC6Q86TZ1 520 aa6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 PHACTR4Q8IZ21 702 aa6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 C12orf50Q8NA57 414 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 UBASH3BQ8TF42 649 aa6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 WDR89Q96FK6 387 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 NACC1Q96RE7 527 aa6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 TMPRSS13Q9BYE2 586 aa6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 CEP41Q9BYV8 373 aa6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 SLKQ9H2G2 1235 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 TMX1Q9H3N1 280 aa6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 CRIM1Q9NZV1 1036 aa6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 CORINQ9Y5Q5 1042 aa6.59□□□□□ -1.35
HMGB1P45-201ENST00000435986 A0A1W2PQH9 124 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 ANKRD62A6NC57 917 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 AGRPO00253 132 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 TMPRSS2O15393 492 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 RNGTTO60942 597 aaKnown RBP6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 CTSBP07858 339 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 CDK8P49336 464 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 SOX4Q06945 474 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 MTERF2Q49AM1 385 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 PPM1JQ5JR12 505 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 ZBTB37Q5TC79 503 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 OVOS1Q6IE37 1185 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 EEPD1Q7L9B9 569 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 DYMQ7RTS9 669 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 MCATQ8IVS2 390 aaKnown RBP6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 ZNF669Q96BR6 464 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 ATG4CQ96DT6 458 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 CNNM2Q9H8M5 875 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 TBX22Q9Y458 520 aa6.58□□□□□ -1.36
HMGB1P45-201ENST00000435986 IQCA1LA6NCM1 817 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 TNFRSF10CO14798 259 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 FURINP09958 794 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 ADH5P11766 374 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 GBP1P32455 592 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 NRG1Q02297 640 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 RASA3Q14644 834 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 ARSHQ5FYA8 562 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 VHLLQ6RSH7 139 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 FAM178BQ8IXR5 827 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 ST13P5Q8NFI4 369 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 TMEM87BQ96K49 555 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 CCDC74BQ96LY2 380 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 FANCD2OSQ96PS1 177 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 EPN3Q9H201 632 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 KCNK4Q9NYG8 393 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 MSRB2Q9Y3D2 182 aa6.57□□□□□ -1.36
HMGB1P45-201ENST00000435986 GAS2O43903 313 aaKnown RBP6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 APBA3O96018 575 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 SELPP16109 830 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 ASPAP45381 313 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 USP11P51784 963 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 SLC7A5Q01650 507 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 RING1Q06587 406 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 GRIK4Q16099 956 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 UNC5AQ6ZN44 842 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 RUFY4Q6ZNE9 571 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 MRPL41Q8IXM3 137 aaKnown RBP6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 SLFN12Q8IYM2 578 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 TMEM130Q8N3G9 435 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 TNKS2Q9H2K2 1166 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 USP21Q9UK80 565 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 PCOLCE2Q9UKZ9 415 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 PCDHGC5Q9Y5F6 944 aa6.56□□□□□ -1.36
HMGB1P45-201ENST00000435986 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 TM4SF5O14894 197 aa6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 ADAM23O75077 832 aa6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 GJB6O95452 261 aa6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 DLGAP3O95886 979 aa6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 GNPTABQ3T906 1256 aa6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 RNF187Q5TA31 235 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 HOMER1Q86YM7 354 aa6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 CELF2-AS1Q8N7Q2 184 aa6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 SMARCC1Q92922 1105 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 ACSF2Q96CM8 615 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 DNAJC7Q99615 494 aa6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 ANTXR1Q9H6X2 564 aa6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 PPP1R9AQ9ULJ8 1098 aa6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 MRPL42Q9Y6G3 142 aaKnown RBP6.55□□□□□ -1.36
HMGB1P45-201ENST00000435986 CHURC1-FNTBB4DL54 471 aa6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 C9orf172C9J069 976 aa6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 ENPP3O14638 875 aa6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 RGS13O14921 159 aa6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 PPP1R12AO14974 1030 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 CAP2P40123 477 aa6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 ZNF143P52747 638 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 TTLL4Q14679 1199 aa6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 C6orf15Q6UXA7 325 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 KIAA1211Q6ZU35 1233 aa6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 SMYD4Q8IYR2 804 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 MFSD2AQ8NA29 543 aa6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 APPBP2Q92624 585 aa6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 FOXQ1Q9C009 403 aa6.54□□□□□ -1.36
HMGB1P45-201ENST00000435986 AKTIPQ9H8T0 292 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms