RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ZBTB33Q86T24 672 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 KRT222Q8N1A0 295 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 HESX1Q9UBX0 185 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 RABGAP1Q9Y3P9 1069 aa12.4□□□□□ -0.42
SCN4A-201ENST00000435607 GBP6Q6ZN66 633 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 MRPL44Q9H9J2 332 aaKnown RBP12.39□□□□□ -0.43
SCN4A-201ENST00000435607 A6NNZ2 444 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 GCNT3O95395 438 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 TUBB8Q3ZCM7 444 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 LINS1Q8NG48 757 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 RSPH14Q9UHP6 348 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 SLC12A6Q9UHW9 1150 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 EXOC3O60645 756 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 DEXIO95424 95 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 SLC39A6Q13433 755 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 SDCCAG3Q96C92 435 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 KIF9Q9HAQ2 790 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 BCS1LQ9Y276 419 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 CCDC122Q5T0U0 273 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 NECAB1Q8N987 351 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 TMEM87BQ96K49 555 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 PLCB1Q9NQ66 1216 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 JAG2Q9Y219 1238 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 TBC1D8BQ0IIM8 1120 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 TSTA3Q13630 321 aaPredicted RBP12.39□□□□□ -0.43
SCN4A-201ENST00000435607 HADHQ16836 314 aaKnown RBP12.39□□□□□ -0.43
SCN4A-201ENST00000435607 METTL23Q86XA0 190 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 CEP57Q86XR8 500 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 PLIN2Q99541 437 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 SLC9C1Q4G0N8 1177 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 MAEAQ7L5Y9 396 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 RBSNQ9H1K0 784 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 ITM2BQ9Y287 266 aa12.39□□□□□ -0.43
SCN4A-201ENST00000435607 ELP1O95163 1332 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 KRT25Q7Z3Z0 450 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 HELBQ8NG08 1087 aaPredicted RBP12.38□□□□□ -0.43
SCN4A-201ENST00000435607 FAM76AQ8TAV0 307 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 MBIPQ9NS73 344 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 PARP2Q9UGN5 583 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 TRIM27P14373 513 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 DHX32Q7L7V1 743 aaKnown RBP12.38□□□□□ -0.43
SCN4A-201ENST00000435607 GOLGA8QA0A0J9YX86 632 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 GOLGA8OA6NCC3 632 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 GOLGA8NF8WBI6 632 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 FLOT1O75955 427 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 PHBP35232 272 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 ZNF131P52739 623 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 KRT33BQ14525 404 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 CALCRLQ16602 461 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 LMNTD2Q8IXW0 634 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 BTG4Q9NY30 223 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 RUSC2Q8N2Y8 1516 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 ZNF853P0CG23 659 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 IDI1Q13907 227 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 USH1GQ495M9 461 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 GIMAP6Q6P9H5 292 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 HELLSQ9NRZ9 838 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 SH3TC1Q8TE82 1336 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 CFBP00751 764 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 PPP2R5BQ15173 497 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCN4A-201ENST00000435607 ST7Q9NRC1 585 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 STX17P56962 302 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 TUBB2AQ13885 445 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 FAM160B1Q5W0V3 765 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 B4GALNT4Q76KP1 1039 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 TUBB2BQ9BVA1 445 aa12.38□□□□□ -0.43
SCN4A-201ENST00000435607 EIF4G3O43432 1585 aaKnown RBP12.37□□□□□ -0.43
SCN4A-201ENST00000435607 AKR1B15C9JRZ8 316 aaPredicted RBP12.37□□□□□ -0.43
SCN4A-201ENST00000435607 NBPF11Q86T75 865 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 DPP9Q86TI2 863 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 ARHGEF2Q92974 986 aaKnown RBP12.37□□□□□ -0.43
SCN4A-201ENST00000435607 CTTNBP2NLQ9P2B4 639 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 CPSF3Q9UKF6 684 aaKnown RBP12.37□□□□□ -0.43
SCN4A-201ENST00000435607 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 MBD4O95243 580 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 OSBPP22059 807 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 ABCC5O15440 1437 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 GNA14O95837 355 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 ANXA1P04083 346 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 RYBPQ8N488 228 aaPredicted RBP12.37□□□□□ -0.43
SCN4A-201ENST00000435607 ARHGAP45Q92619 1136 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 RILPQ96NA2 401 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 MMS19Q96T76 1030 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 TLR3O15455 904 aaKnown RBP12.37□□□□□ -0.43
SCN4A-201ENST00000435607 FBXO31Q5XUX0 539 aaPredicted RBP12.37□□□□□ -0.43
SCN4A-201ENST00000435607 MRRFQ96E11 262 aaKnown RBP12.37□□□□□ -0.43
SCN4A-201ENST00000435607 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 PDE8AO60658 829 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 IFT20Q8IY31 132 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 GAS7O60861 476 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 RNASELQ05823 741 aaKnown RBP12.37□□□□□ -0.43
SCN4A-201ENST00000435607 GOLGA5Q8TBA6 731 aa12.37□□□□□ -0.43
SCN4A-201ENST00000435607 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.37□□□□□ -0.43
SCN4A-201ENST00000435607 MAGI1Q96QZ7 1491 aaPredicted RBP12.36□□□□□ -0.43
SCN4A-201ENST00000435607 SRGAP2BP0DMP2 458 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 ANKRD35Q8N283 1001 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 ATP8B3O60423 1300 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 STAM2O75886 525 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms