RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 BBXQ8WY36 941 aaPredicted RBP17.87■□□□□ 0.45
SCARF1-203ENST00000434376 MXD3Q9BW11 206 aa17.87■□□□□ 0.45
SCARF1-203ENST00000434376 BLZF1Q9H2G9 400 aa17.87■□□□□ 0.45
SCARF1-203ENST00000434376 ZNF804BA4D1E1 1349 aa17.86■□□□□ 0.45
SCARF1-203ENST00000434376 TFAP4Q01664 338 aa17.86■□□□□ 0.45
SCARF1-203ENST00000434376 BRAPQ7Z569 592 aa17.86■□□□□ 0.45
SCARF1-203ENST00000434376 CNBD1Q8NA66 436 aa17.86■□□□□ 0.45
SCARF1-203ENST00000434376 NAT10Q9H0A0 1025 aaKnown RBP17.86■□□□□ 0.45
SCARF1-203ENST00000434376 SLC39A14Q15043 492 aa17.86■□□□□ 0.45
SCARF1-203ENST00000434376 AXDND1Q5T1B0 1012 aaPredicted RBP17.86■□□□□ 0.45
SCARF1-203ENST00000434376 RPGRQ92834 1020 aaKnown RBP17.86■□□□□ 0.45
SCARF1-203ENST00000434376 CNNM2Q9H8M5 875 aa17.86■□□□□ 0.45
SCARF1-203ENST00000434376 UFL1O94874 794 aa17.85■□□□□ 0.45
SCARF1-203ENST00000434376 DPF2Q92785 391 aa17.85■□□□□ 0.45
SCARF1-203ENST00000434376 RNF41Q9H4P4 317 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-203ENST00000434376 CTR9Q6PD62 1173 aa17.85■□□□□ 0.45
SCARF1-203ENST00000434376 NBPF11Q86T75 865 aa17.85■□□□□ 0.45
SCARF1-203ENST00000434376 CTCFLQ8NI51 663 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-203ENST00000434376 ZSCAN10Q96SZ4 725 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-203ENST00000434376 VGLL3A8MV65 326 aa17.85■□□□□ 0.45
SCARF1-203ENST00000434376 CRACR2BQ8N4Y2 399 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-203ENST00000434376 TDRD7Q8NHU6 1098 aaKnown RBP17.85■□□□□ 0.45
SCARF1-203ENST00000434376 BSDC1Q9NW68 430 aaPredicted RBP17.85■□□□□ 0.45
SCARF1-203ENST00000434376 G3V3G9 751 aa17.84■□□□□ 0.45
SCARF1-203ENST00000434376 DCAF8Q5TAQ9 597 aa17.84■□□□□ 0.45
SCARF1-203ENST00000434376 JMYQ8N9B5 988 aa17.84■□□□□ 0.45
SCARF1-203ENST00000434376 FANCLQ9NW38 375 aa17.84■□□□□ 0.45
SCARF1-203ENST00000434376 XIRP1Q702N8 1843 aaKnown RBP17.84■□□□□ 0.45
SCARF1-203ENST00000434376 TOGARAM1Q9Y4F4 1720 aa17.84■□□□□ 0.45
SCARF1-203ENST00000434376 TMEM232C9JQI7 657 aa17.84■□□□□ 0.45
SCARF1-203ENST00000434376 SH3RF3Q8TEJ3 882 aaPredicted RBP17.84■□□□□ 0.45
SCARF1-203ENST00000434376 POLR3EQ9NVU0 708 aa17.84■□□□□ 0.45
SCARF1-203ENST00000434376 TOB1P50616 345 aaPredicted RBP17.83■□□□□ 0.45
SCARF1-203ENST00000434376 CEP135Q66GS9 1140 aa17.83■□□□□ 0.45
SCARF1-203ENST00000434376 STAG2Q8N3U4 1231 aa17.83■□□□□ 0.45
SCARF1-203ENST00000434376 CDCA7Q9BWT1 371 aaPredicted RBP17.83■□□□□ 0.45
SCARF1-203ENST00000434376 CRNKL1Q9BZJ0 848 aaKnown RBP17.83■□□□□ 0.45
SCARF1-203ENST00000434376 CSRNP2Q9H175 543 aa17.83■□□□□ 0.45
SCARF1-203ENST00000434376 CTAGE5O15320 804 aa17.83■□□□□ 0.44
SCARF1-203ENST00000434376 PDIA4P13667 645 aaKnown RBP17.83■□□□□ 0.44
SCARF1-203ENST00000434376 FOXP4Q8IVH2 680 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-203ENST00000434376 N4BP2Q86UW6 1770 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-203ENST00000434376 PKD1L3Q7Z443 1732 aa17.83■□□□□ 0.44
SCARF1-203ENST00000434376 GLI3P10071 1580 aa17.83■□□□□ 0.44
SCARF1-203ENST00000434376 KIF20AO95235 890 aa17.83■□□□□ 0.44
SCARF1-203ENST00000434376 YEATS4O95619 227 aa17.83■□□□□ 0.44
SCARF1-203ENST00000434376 LDHBP07195 334 aaKnown RBP17.83■□□□□ 0.44
SCARF1-203ENST00000434376 HEATR3Q7Z4Q2 680 aa17.83■□□□□ 0.44
SCARF1-203ENST00000434376 KRI1Q8N9T8 703 aaKnown RBP17.83■□□□□ 0.44
SCARF1-203ENST00000434376 NSUN4Q96CB9 384 aaKnown RBP17.83■□□□□ 0.44
SCARF1-203ENST00000434376 DCP1AQ9NPI6 582 aaPredicted RBP17.83■□□□□ 0.44
SCARF1-203ENST00000434376 STRCQ7RTU9 1775 aa17.83■□□□□ 0.44
SCARF1-203ENST00000434376 SLIT2O94813 1529 aa17.83■□□□□ 0.44
SCARF1-203ENST00000434376 SCNN1DP51172 638 aa17.82■□□□□ 0.44
SCARF1-203ENST00000434376 DOK7Q18PE1 504 aa17.82■□□□□ 0.44
SCARF1-203ENST00000434376 UBASH3AP57075 661 aa17.82■□□□□ 0.44
SCARF1-203ENST00000434376 PDE4BQ07343 736 aa17.82■□□□□ 0.44
SCARF1-203ENST00000434376 UBE4AQ14139 1066 aa17.82■□□□□ 0.44
SCARF1-203ENST00000434376 RIOK1Q9BRS2 568 aaKnown RBP17.82■□□□□ 0.44
SCARF1-203ENST00000434376 PCNTO95613 3336 aa17.82■□□□□ 0.44
SCARF1-203ENST00000434376 MMP1P03956 469 aa17.82■□□□□ 0.44
SCARF1-203ENST00000434376 LRRC4BQ9NT99 713 aa17.82■□□□□ 0.44
SCARF1-203ENST00000434376 FMNL1O95466 1100 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-203ENST00000434376 IFNAR1P17181 557 aa17.81■□□□□ 0.44
SCARF1-203ENST00000434376 OGFRQ9NZT2 677 aa17.81■□□□□ 0.44
SCARF1-203ENST00000434376 PARP4Q9UKK3 1724 aaKnown RBP17.81■□□□□ 0.44
SCARF1-203ENST00000434376 SMTNL1A8MU46 457 aa17.81■□□□□ 0.44
SCARF1-203ENST00000434376 GNAT2P19087 354 aa17.81■□□□□ 0.44
SCARF1-203ENST00000434376 CMA1P23946 247 aa17.81■□□□□ 0.44
SCARF1-203ENST00000434376 PTPN14Q15678 1187 aa17.81■□□□□ 0.44
SCARF1-203ENST00000434376 NOL10Q9BSC4 688 aaKnown RBP17.81■□□□□ 0.44
SCARF1-203ENST00000434376 UBA5Q9GZZ9 404 aa17.81■□□□□ 0.44
SCARF1-203ENST00000434376 NARFQ9UHQ1 456 aa17.81■□□□□ 0.44
SCARF1-203ENST00000434376 ZNF215Q9UL58 517 aaPredicted RBP17.81■□□□□ 0.44
SCARF1-203ENST00000434376 DEXIO95424 95 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 TSPY3P0CV98 308 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 TSPY8P0CW00 308 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 CACNB3P54284 484 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 METTL16Q86W50 562 aaKnown RBP17.8■□□□□ 0.44
SCARF1-203ENST00000434376 STAG1Q8WVM7 1258 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 ST7Q9NRC1 585 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 ADAMTS7Q9UKP4 1686 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 CCDC196A0A1B0GTZ2 297 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 FAM196BA6NMK8 535 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 PLCD1P51178 756 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 TPM4P67936 248 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 PLA2G4DQ86XP0 818 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 KAT14Q9H8E8 782 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 MYH14Q7Z406 1995 aaKnown RBP17.8■□□□□ 0.44
SCARF1-203ENST00000434376 LIFRP42702 1097 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 FANCCQ00597 558 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 ELF2Q15723 593 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 LRRC8AQ8IWT6 810 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 SEPT12Q8IYM1 358 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 ZNF444Q8N0Y2 327 aaPredicted RBP17.8■□□□□ 0.44
SCARF1-203ENST00000434376 SRBD1Q8N5C6 995 aaKnown RBP17.8■□□□□ 0.44
SCARF1-203ENST00000434376 ANKRD7Q92527 254 aa17.8■□□□□ 0.44
SCARF1-203ENST00000434376 DISP2A7MBM2 1401 aa17.79■□□□□ 0.44
SCARF1-203ENST00000434376 PP2D1A8MPX8 630 aa17.79■□□□□ 0.44
SCARF1-203ENST00000434376 RPS6KA4O75676 772 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms