RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 THRAP3Q9Y2W1 955 aaKnown RBP8.75□□□□□ -1.01
COL17A1-204ENST00000433822 MYH15Q9Y2K3 1946 aa8.75□□□□□ -1.01
COL17A1-204ENST00000433822 SPATA31A5Q5VU36 1347 aa8.75□□□□□ -1.01
COL17A1-204ENST00000433822 SPATA31A7Q8IWB4 1347 aa8.75□□□□□ -1.01
COL17A1-204ENST00000433822 SALL1Q9NSC2 1324 aa8.75□□□□□ -1.01
COL17A1-204ENST00000433822 NUP98P52948 1817 aa8.75□□□□□ -1.01
COL17A1-204ENST00000433822 CARMIL3Q8ND23 1372 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 RTL9Q8NET4 1388 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 AKAP11Q9UKA4 1901 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 LAMB2P55268 1798 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 RIC1Q4ADV7 1423 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 GADD45BO75293 160 aaPredicted RBP8.74□□□□□ -1.01
COL17A1-204ENST00000433822 ZBTB7AO95365 584 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 HSP90B1P14625 803 aaKnown RBP8.74□□□□□ -1.01
COL17A1-204ENST00000433822 CPA1P15085 419 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 CBLBQ13191 982 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 IFIT5Q13325 482 aaKnown RBP8.74□□□□□ -1.01
COL17A1-204ENST00000433822 TTF1Q15361 905 aaPredicted RBP8.74□□□□□ -1.01
COL17A1-204ENST00000433822 ERFEQ4G0M1 354 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 MYSM1Q5VVJ2 828 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 ZSCAN25Q6NSZ9 544 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.74□□□□□ -1.01
COL17A1-204ENST00000433822 APPBP2Q92624 585 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 DNAJC2Q99543 621 aaKnown RBP8.74□□□□□ -1.01
COL17A1-204ENST00000433822 FHDC1Q9C0D6 1143 aaPredicted RBP8.74□□□□□ -1.01
COL17A1-204ENST00000433822 BTG4Q9NY30 223 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 CFAP45Q9UL16 551 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 ZKSCAN5Q9Y2L8 839 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 DNMT3AQ9Y6K1 912 aaPredicted RBP8.74□□□□□ -1.01
COL17A1-204ENST00000433822 MAST3O60307 1309 aa8.74□□□□□ -1.01
COL17A1-204ENST00000433822 VPS37CA5D8V6 355 aaPredicted RBP8.73□□□□□ -1.01
COL17A1-204ENST00000433822 OFD1O75665 1012 aa8.73□□□□□ -1.01
COL17A1-204ENST00000433822 IGHA1P01876 353 aa8.73□□□□□ -1.01
COL17A1-204ENST00000433822 TPM3P06753 285 aa8.73□□□□□ -1.01
COL17A1-204ENST00000433822 HSPD1P10809 573 aaKnown RBP8.73□□□□□ -1.01
COL17A1-204ENST00000433822 CYP19A1P11511 503 aaPredicted RBP8.73□□□□□ -1.01
COL17A1-204ENST00000433822 ITGA6P23229 1130 aa8.73□□□□□ -1.01
COL17A1-204ENST00000433822 DNM1Q05193 864 aaKnown RBP8.73□□□□□ -1.01
COL17A1-204ENST00000433822 RESTQ13127 1097 aa8.73□□□□□ -1.01
COL17A1-204ENST00000433822 FOXD4L5Q5VV16 416 aaPredicted RBP8.73□□□□□ -1.01
COL17A1-204ENST00000433822 SV2AQ7L0J3 742 aa8.73□□□□□ -1.01
COL17A1-204ENST00000433822 NLRP10Q86W26 655 aa8.73□□□□□ -1.01
COL17A1-204ENST00000433822 FOXD4L4Q8WXT5 416 aaPredicted RBP8.73□□□□□ -1.01
COL17A1-204ENST00000433822 PIGBQ92521 554 aa8.73□□□□□ -1.01
COL17A1-204ENST00000433822 EDC3Q96F86 508 aaKnown RBP8.73□□□□□ -1.01
COL17A1-204ENST00000433822 ARXQ96QS3 562 aa8.73□□□□□ -1.01
COL17A1-204ENST00000433822 SYT17Q9BSW7 474 aa8.73□□□□□ -1.01
COL17A1-204ENST00000433822 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.73□□□□□ -1.01
COL17A1-204ENST00000433822 USP25Q9UHP3 1055 aa8.73□□□□□ -1.01
COL17A1-204ENST00000433822 CDV3Q9UKY7 258 aaKnown RBP8.73□□□□□ -1.01
COL17A1-204ENST00000433822 RIPOR2Q9Y4F9 1068 aa8.73□□□□□ -1.01
COL17A1-204ENST00000433822 GOLIM4O00461 696 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 CTAGE5O15320 804 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 FIBPO43427 364 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 DHX16O60231 1041 aaKnown RBP8.72□□□□□ -1.01
COL17A1-204ENST00000433822 PDE8AO60658 829 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 ARHGEF15O94989 841 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 CCDC192P0DO97 292 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 ARID4AP29374 1257 aaPredicted RBP8.72□□□□□ -1.01
COL17A1-204ENST00000433822 PIP4K2AP48426 406 aaPredicted RBP8.72□□□□□ -1.01
COL17A1-204ENST00000433822 CTSWP56202 376 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 DHX9Q08211 1270 aaKnown RBP8.72□□□□□ -1.01
COL17A1-204ENST00000433822 UBE3CQ15386 1083 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 ALX1Q15699 326 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 LRRC24Q50LG9 513 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 TTC39AQ5SRH9 613 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 KANK3Q6NY19 840 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 TMED8Q6PL24 325 aaPredicted RBP8.72□□□□□ -1.01
COL17A1-204ENST00000433822 Q6ZUG5 572 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 DDX46Q7L014 1031 aaKnown RBP8.72□□□□□ -1.01
COL17A1-204ENST00000433822 CDC37L1Q7L3B6 337 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 TTC6Q86TZ1 520 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 DNAJC10Q8IXB1 793 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 VWA5B2Q8N398 1253 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 VGLL2Q8N8G2 317 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 NECAB1Q8N987 351 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 TTLL11Q8NHH1 800 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 DDX54Q8TDD1 881 aaKnown RBP8.72□□□□□ -1.01
COL17A1-204ENST00000433822 NEUROD6Q96NK8 337 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 MTA3Q9BTC8 594 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 GDPD2Q9HCC8 539 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 CHMP3Q9Y3E7 222 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 DOCK2Q92608 1830 aa8.72□□□□□ -1.01
COL17A1-204ENST00000433822 ANKRD18BA2A2Z9 1011 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 CDC14CA4D256 554 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 E7EWF7 191 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 IGSF3O75054 1194 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 TPM2P07951 284 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 UQCRFS1P1P0C7P4 283 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 IRS1P35568 1242 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 MARSP56192 900 aaKnown RBP8.71□□□□□ -1.02
COL17A1-204ENST00000433822 TIMM10P62072 90 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 SCRN1Q12765 414 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 IMMTQ16891 758 aaKnown RBP8.71□□□□□ -1.02
COL17A1-204ENST00000433822 STOX1Q6ZVD7 989 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 ZNF34Q8IZ26 560 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 NSUN7Q8NE18 718 aaKnown RBP8.71□□□□□ -1.02
COL17A1-204ENST00000433822 LEO1Q8WVC0 666 aaPredicted RBP8.71□□□□□ -1.02
COL17A1-204ENST00000433822 XAGE2Q96GT9 111 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 CHAMP1Q96JM3 812 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms